AT5G63910 : farnesylcysteine lyase
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G63910
Description farnesylcysteine lyase
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G63910 farnesylcysteine lyase farnesylcysteine lyase 1 0.32 -0.31
2 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1
0.72 0.34 -0.33
3 AT2G17390 ankyrin repeat-containing 2B ankyrin repeat-containing 2B 0.71 0.31 -0.3
4 AT3G14960 Galactosyltransferase family protein 0.71 0.29 -0.34
5 AT1G68100 ZIP metal ion transporter family IAA-ALANINE RESISTANT 1 0.67 0.32 -0.32
6 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b
-0.65 0.32 -0.32
7 AT4G22150 plant UBX domain-containing protein 3 plant UBX domain-containing
protein 3
0.64 0.33 -0.31
8 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein
0.64 0.34 -0.32
9 AT1G20890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.64 0.32 -0.32
10 AT3G06240 F-box family protein 0.63 0.33 -0.32
11 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.63 0.31 -0.32
12 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.62 0.31 -0.31
13 AT2G33440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.32
14 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein
ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D
-0.62 0.32 -0.29
15 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1
0.62 0.33 -0.31
16 AT5G19830 Peptidyl-tRNA hydrolase family protein 0.61 0.33 -0.32
17 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein
-0.61 0.33 -0.3
18 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2
-0.6 0.32 -0.31
19 AT5G04520 Protein of unknown function DUF455 0.6 0.32 -0.31
20 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1
0.6 0.34 -0.31
21 AT1G55180 phospholipase D alpha 4 PLDALPHA4, phospholipase D alpha 4 -0.58 0.32 -0.33
22 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 -0.58 0.35 -0.31
23 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.58 0.31 -0.33
24 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein
-0.58 0.31 -0.31
25 AT3G03210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 59 Blast hits to 59
proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink).
0.57 0.31 -0.31
26 AT3G51610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).
NO PRIMEXINE AND PLASMA MEMBRANE
UNDULATION
0.57 0.3 -0.32
27 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.57 0.31 -0.31
28 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.57 0.3 -0.3
29 AT5G64930 CPR5 protein, putative CONSTITUTIVE EXPRESSION OF PR
GENES 5, HYPERSENESCENCE 1
0.57 0.32 -0.34
30 AT5G01890 Leucine-rich receptor-like protein kinase family protein -0.56 0.33 -0.31
31 AT1G15200 protein-protein interaction regulator family protein -0.56 0.31 -0.31
32 AT4G33640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.56 0.31 -0.32
33 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein
0.56 0.3 -0.29
34 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
0.56 0.32 -0.31
35 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein
ATHB-15, ATHB15, CORONA, INCURVATA
4
-0.56 0.31 -0.33
36 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.56 0.3 -0.34
37 AT2G43760 molybdopterin biosynthesis MoaE family protein 0.55 0.3 -0.33
38 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.55 0.31 -0.32
39 AT4G32730 Homeodomain-like protein ATMYB3R-1, ARABIDOOSIS THALIANA
MYB DOMAIN PROTEIN 3R1, MYB DOMAIN
PROTEIN 3R1, C-MYB-LIKE
TRANSCRIPTION FACTOR 3R-1, PC-MYB1
-0.55 0.32 -0.33
40 AT3G19770 Vacuolar sorting protein 9 (VPS9) domain ARABIDOPSIS THALIANA VACUOLAR
PROTEIN SORTING 9A, VPS9, VPS9A
0.55 0.3 -0.31
41 AT5G02770 unknown protein; Has 469 Blast hits to 336 proteins in 126
species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi -
22; Plants - 47; Viruses - 0; Other Eukaryotes - 97
(source: NCBI BLink).
modifier of snc1, 11 -0.54 0.3 -0.32
42 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}
-0.54 0.33 -0.32
43 AT1G10120 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.53 0.31 -0.32
44 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 -0.53 0.3 -0.31
45 AT3G05830 Encodes alpha-helical IF (intermediate filament)-like
protein.
-0.53 0.31 -0.31
46 AT5G25475 AP2/B3-like transcriptional factor family protein -0.51 0.33 -0.29
47 AT3G43280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19240.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.51 0.31 -0.32
48 AT4G11920 cell cycle switch protein 52 A2 cell cycle switch protein 52 A2,
FIZZY-RELATED 1
-0.5 0.29 -0.33
49 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).
-0.5 0.3 -0.32
50 AT1G06550 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein
-0.5 0.32 -0.32
51 AT5G08450 CONTAINS InterPro DOMAIN/s: Histone deacetylation protein
Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801
proteins in 1175 species: Archae - 64; Bacteria - 2390;
Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses -
208; Other Eukaryotes - 10599 (source: NCBI BLink).
-0.49 0.3 -0.32
52 AT2G42270 U5 small nuclear ribonucleoprotein helicase -0.48 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway
-0.73 0.42 -0.44 C0210
54 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.61 0.31 -0.32 C0235
55 C0212 PR_MST_2336.8 - - - -0.57 0.45 -0.43