AGICode | AT5G63860 |
Description | Regulator of chromosome condensation (RCC1) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G63860 | Regulator of chromosome condensation (RCC1) family protein | UVB-RESISTANCE 8 | 1 | 0.32 | -0.31 | ||
2 | AT1G65410 | non-intrinsic ABC protein 11 | ATP-binding cassette I13, non-intrinsic ABC protein 11, non-intrinsic ABC protein 11, TRIGALACTOSYLDIACYLGLYCEROL 3 |
0.73 | 0.33 | -0.32 | ||
3 | AT2G03680 | spiral1 | SKU6, SPIRAL1 | 0.72 | 0.32 | -0.3 | ||
4 | AT2G04570 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.72 | 0.29 | -0.29 | |||
5 | AT1G13930 | Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. |
0.7 | 0.3 | -0.31 | |||
6 | AT1G15210 | pleiotropic drug resistance 7 | ATP-binding cassette G35, PLEIOTROPIC DRUG RESISTANCE 7, pleiotropic drug resistance 7 |
-0.7 | 0.32 | -0.32 | ||
7 | AT2G33500 | B-box type zinc finger protein with CCT domain | 0.7 | 0.3 | -0.33 | |||
8 | AT5G18760 | RING/U-box superfamily protein | 0.7 | 0.31 | -0.34 | |||
9 | AT2G30040 | mitogen-activated protein kinase kinase kinase 14 | mitogen-activated protein kinase kinase kinase 14 |
-0.69 | 0.32 | -0.33 | ||
10 | AT3G18080 | B-S glucosidase 44 | B-S glucosidase 44 | 0.68 | 0.33 | -0.32 | ||
11 | AT2G39430 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.68 | 0.31 | -0.31 | |||
12 | AT3G61460 | brassinosteroid-responsive RING-H2 | brassinosteroid-responsive RING-H2 | 0.67 | 0.28 | -0.31 | ||
13 | AT4G16146 | cAMP-regulated phosphoprotein 19-related protein | 0.67 | 0.3 | -0.3 | |||
14 | AT1G12845 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.34 | -0.32 | |||
15 | AT5G28300 | Duplicated homeodomain-like superfamily protein | 0.66 | 0.34 | -0.3 | |||
16 | AT3G28920 | homeobox protein 34 | homeobox protein 34, homeobox protein 34, ZINC FINGER HOMEODOMAIN 9 |
0.66 | 0.29 | -0.32 | ||
17 | AT5G57980 | RNA polymerase II fifth largest subunit, C | RNA polymerase II fifth largest subunit, C |
-0.66 | 0.32 | -0.3 | ||
18 | AT1G74390 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.66 | 0.31 | -0.33 | |||
19 | AT5G44580 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44582.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.32 | -0.31 | |||
20 | AT4G38020 | tRNA/rRNA methyltransferase (SpoU) family protein | 0.65 | 0.31 | -0.32 | |||
21 | AT1G10760 | Pyruvate phosphate dikinase, PEP/pyruvate binding domain | GWD, GWD1, STARCH EXCESS 1, SOP, SOP1 |
0.64 | 0.31 | -0.31 | ||
22 | AT1G06460 | alpha-crystallin domain 32.1 | ALPHA-CRYSTALLIN DOMAIN 31.2, alpha-crystallin domain 32.1 |
0.64 | 0.31 | -0.32 | ||
23 | AT5G44350 | ethylene-responsive nuclear protein -related | -0.64 | 0.31 | -0.31 | |||
24 | AT2G28670 | Disease resistance-responsive (dirigent-like protein) family protein |
ENHANCED SUBERIN 1 | -0.64 | 0.31 | -0.31 | ||
25 | AT4G36810 | geranylgeranyl pyrophosphate synthase 1 | geranylgeranyl pyrophosphate synthase 1 |
0.63 | 0.29 | -0.35 | ||
26 | AT5G39790 | 5'-AMP-activated protein kinase-related | 0.63 | 0.32 | -0.3 | |||
27 | AT1G48510 | Surfeit locus 1 cytochrome c oxidase biogenesis protein | -0.63 | 0.32 | -0.34 | |||
28 | AT1G30750 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, pollen tube; Has 1177 Blast hits to 607 proteins in 189 species: Archae - 0; Bacteria - 312; Metazoa - 195; Fungi - 185; Plants - 27; Viruses - 16; Other Eukaryotes - 442 (source: NCBI BLink). |
-0.63 | 0.33 | -0.33 | |||
29 | AT5G14650 | Pectin lyase-like superfamily protein | -0.63 | 0.31 | -0.33 | |||
30 | AT1G31950 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.63 | 0.32 | -0.29 | |||
31 | AT4G14605 | Mitochondrial transcription termination factor family protein |
0.63 | 0.33 | -0.32 | |||
32 | AT2G32300 | uclacyanin 1 | uclacyanin 1 | -0.63 | 0.31 | -0.33 | ||
33 | AT5G05900 | UDP-Glycosyltransferase superfamily protein | -0.63 | 0.33 | -0.33 | |||
34 | AT3G49845 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
WINDHOSE 3 | -0.62 | 0.31 | -0.31 | ||
35 | AT2G30210 | laccase 3 | laccase 3 | -0.62 | 0.31 | -0.32 | ||
36 | AT2G27510 | ferredoxin 3 | ferredoxin 3, ferredoxin 3 | -0.62 | 0.31 | -0.29 | ||
37 | AT5G49350 | Glycine-rich protein family | -0.62 | 0.31 | -0.32 | |||
38 | AT5G37690 | SGNH hydrolase-type esterase superfamily protein | -0.62 | 0.3 | -0.32 | |||
39 | AT2G17070 | Arabidopsis protein of unknown function (DUF241) | -0.61 | 0.31 | -0.31 | |||
40 | AT2G36460 | Aldolase superfamily protein | 0.61 | 0.33 | -0.31 | |||
41 | AT1G71870 | MATE efflux family protein | -0.61 | 0.34 | -0.3 | |||
42 | AT3G50500 | SNF1-related protein kinase 2.2 | SNF1-RELATED PROTEIN KINASE 2-2, SNF1-related protein kinase 2.2, SNF1-RELATED PROTEIN KINASE 2-2, SRK2D |
0.61 | 0.28 | -0.33 | ||
43 | AT1G09530 | phytochrome interacting factor 3 | PHYTOCHROME-ASSOCIATED PROTEIN 3, phytochrome interacting factor 3, PHOTOCURRENT 1 |
0.61 | 0.33 | -0.32 | ||
44 | AT1G73710 | Pentatricopeptide repeat (PPR) superfamily protein | 0.61 | 0.33 | -0.29 | |||
45 | AT3G03980 | NAD(P)-binding Rossmann-fold superfamily protein | 0.6 | 0.31 | -0.3 | |||
46 | AT2G02080 | indeterminate(ID)-domain 4 | indeterminate(ID)-domain 4, indeterminate(ID)-domain 4 |
0.6 | 0.32 | -0.32 | ||
47 | AT2G21650 | Homeodomain-like superfamily protein | ARABIDOPSIS RAD-LIKE 2, MATERNAL EFFECT EMBRYO ARREST 3, RADIALIS-LIKE SANT/MYB 1 |
-0.6 | 0.31 | -0.3 | ||
48 | AT1G60060 | Serine/threonine-protein kinase WNK (With No Lysine)-related |
0.6 | 0.31 | -0.31 | |||
49 | AT1G64180 | intracellular protein transport protein USO1-related | 0.6 | 0.31 | -0.34 | |||
50 | AT2G43670 | Carbohydrate-binding X8 domain superfamily protein | -0.6 | 0.33 | -0.31 | |||
51 | AT4G33130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.6 | 0.35 | -0.3 | |||
52 | AT5G09480 | hydroxyproline-rich glycoprotein family protein | -0.6 | 0.31 | -0.31 | |||
53 | AT1G08970 | nuclear factor Y, subunit C9 | HEME ACTIVATED PROTEIN 5C, nuclear factor Y, subunit C9 |
0.6 | 0.31 | -0.32 | ||
54 | AT5G64110 | Peroxidase superfamily protein | 0.6 | 0.34 | -0.31 | |||
55 | AT1G64590 | NAD(P)-binding Rossmann-fold superfamily protein | -0.6 | 0.3 | -0.33 | |||
56 | AT1G71980 | Protease-associated (PA) RING/U-box zinc finger family protein |
0.59 | 0.31 | -0.31 | |||
57 | AT5G53250 | arabinogalactan protein 22 | arabinogalactan protein 22, ARABINOGALACTAN PROTEIN 22 |
-0.59 | 0.3 | -0.32 | ||
58 | AT1G03840 | C2H2 and C2HC zinc fingers superfamily protein | Magpie | -0.59 | 0.33 | -0.31 | ||
59 | AT1G14720 | xyloglucan endotransglucosylase/hydrolase 28 | ATXTH28, ENDOXYLOGLUCAN TRANSFERASE A2, xyloglucan endotransglucosylase/hydrolase 28, xyloglucan endotransglycosylase related 2 |
0.59 | 0.31 | -0.32 | ||
60 | AT2G47540 | Pollen Ole e 1 allergen and extensin family protein | -0.59 | 0.31 | -0.31 | |||
61 | AT5G15450 | casein lytic proteinase B3 | ALBINO AND PALE GREEN 6, AtCLPB3, CASEIN LYTIC PROTEINASE B-P, casein lytic proteinase B3 |
0.59 | 0.32 | -0.33 | ||
62 | AT5G45210 | Disease resistance protein (TIR-NBS-LRR class) family | -0.59 | 0.32 | -0.31 | |||
63 | AT1G68560 | alpha-xylosidase 1 | ALPHA-XYLOSIDASE 1, altered xyloglucan 3, thermoinhibition resistant germination 1, alpha-xylosidase 1 |
0.59 | 0.3 | -0.32 | ||
64 | AT2G01300 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits to 73 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
65 | AT5G44930 | Exostosin family protein | ARABINAN DEFICIENT 2 | 0.59 | 0.31 | -0.3 | ||
66 | AT4G16490 | ARM repeat superfamily protein | 0.59 | 0.3 | -0.31 | |||
67 | AT5G21070 | unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
0.58 | 0.29 | -0.31 | |||
68 | AT1G53830 | pectin methylesterase 2 | pectin methylesterase 2, pectin methylesterase 2 |
-0.58 | 0.31 | -0.28 | ||
69 | AT1G27600 | Nucleotide-diphospho-sugar transferases superfamily protein | IRREGULAR XYLEM 9 Homolog, IRREGULAR XYLEM 9-LIKE |
0.58 | 0.31 | -0.33 | ||
70 | AT5G42080 | dynamin-like protein | dynamin-like protein, ADL1A, AG68, dynamin-like protein, DYNAMIN-RELATED PROTEIN 1A, RADIAL SWELLING 9 |
0.58 | 0.33 | -0.32 | ||
71 | AT1G31270 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.58 | 0.3 | -0.31 | |||
72 | AT1G27700 | Syntaxin/t-SNARE family protein | 0.58 | 0.33 | -0.34 | |||
73 | AT1G28130 | Auxin-responsive GH3 family protein | GH3.17 | -0.58 | 0.29 | -0.31 | ||
74 | AT4G05170 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.58 | 0.31 | -0.33 | |||
75 | AT3G54000 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.28 | |||
76 | AT1G73160 | UDP-Glycosyltransferase superfamily protein | -0.57 | 0.31 | -0.33 | |||
77 | AT1G69050 | unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
78 | AT4G28940 | Phosphorylase superfamily protein | -0.57 | 0.32 | -0.3 | |||
79 | AT2G35380 | Peroxidase superfamily protein | -0.56 | 0.32 | -0.33 | |||
80 | AT5G01490 | cation exchanger 4 | ATCAX4, cation exchanger 4 | -0.56 | 0.31 | -0.31 | ||
81 | AT1G71692 | AGAMOUS-like 12 | AGAMOUS-like 12, XAANTAL1 | -0.56 | 0.3 | -0.31 | ||
82 | AT2G32620 | cellulose synthase-like B | cellulose synthase-like B, CELLULOSE SYNTHASE LIKE B2, CELLULOSE SYNTHASE LIKE B2, cellulose synthase-like B |
-0.56 | 0.31 | -0.33 | ||
83 | AT4G26320 | arabinogalactan protein 13 | arabinogalactan protein 13 | -0.56 | 0.32 | -0.33 | ||
84 | AT3G61410 | BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 232 Blast hits to 229 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.55 | 0.3 | -0.3 | |||
85 | AT3G20830 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
-0.55 | 0.31 | -0.32 | |||
86 | AT2G04800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.32 | -0.33 | |||
87 | AT5G42630 | Homeodomain-like superfamily protein | ABERRANT TESTA SHAPE, KANADI 4 | -0.55 | 0.33 | -0.3 | ||
88 | AT3G20110 | cytochrome P450, family 705, subfamily A, polypeptide 20 | cytochrome P450, family 705, subfamily A, polypeptide 20 |
-0.55 | 0.3 | -0.33 | ||
89 | AT1G22420 | hydroxyproline-rich glycoprotein family protein | -0.55 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
90 | C0008 | γ-Aminobutyric acid | - | 4-Aminobutyrate | glutamate degradation IV, 4-aminobutyrate degradation IV, putrescine degradation IV |
-0.62 | 0.31 | -0.32 |