AT5G63950 : chromatin remodeling 24
Query Information
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AGICode AT5G63950
Description chromatin remodeling 24
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 1 0.31 -0.31
2 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 0.72 0.3 -0.32
3 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 -0.69 0.31 -0.29
4 AT3G06010 Homeotic gene regulator ATCHR12 0.67 0.3 -0.34
5 AT1G33680 KH domain-containing protein 0.67 0.32 -0.32
6 AT5G50440 membrin 12 ATMEMB12, membrin 12 -0.67 0.33 -0.31
7 AT3G06130 Heavy metal transport/detoxification superfamily protein 0.66 0.3 -0.3
8 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 0.65 0.32 -0.33
9 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3		 -0.65 0.33 -0.32
10 AT1G80370 Cyclin A2;4 Cyclin A2;4 0.64 0.32 -0.33
11 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.64 0.33 -0.33
12 AT1G31820 Amino acid permease family protein -0.64 0.33 -0.32
13 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.63 0.31 -0.31
14 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 -0.62 0.32 -0.31
15 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 -0.62 0.32 -0.32
16 AT1G32310 unknown protein; Has 28 Blast hits to 28 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.3 -0.3
17 AT5G20700 Protein of unknown function (DUF581) -0.61 0.3 -0.31
18 AT5G62640 proline-rich family protein AtELF5, EARLY FLOWERING 5 0.61 0.32 -0.32
19 AT3G52890 KCBP-interacting protein kinase KCBP-interacting protein kinase 0.6 0.31 -0.28
20 AT5G23430 Transducin/WD40 repeat-like superfamily protein 0.6 0.33 -0.34
21 AT1G15940 Tudor/PWWP/MBT superfamily protein 0.6 0.34 -0.31
22 AT3G12530 PSF2 PSF2 0.59 0.32 -0.33
23 AT4G35800 RNA polymerase II large subunit RNA polymerase II large subunit,
RNA POLYMERASE II LARGE SUBUNIT,
RNA_POL_II_LSRNA_POL_II_LS, RNA
POLYMERASE II LARGE SUBUNIT		 0.59 0.31 -0.31
24 AT1G48320 Thioesterase superfamily protein -0.59 0.33 -0.32
25 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.59 0.31 -0.31
26 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.58 0.31 -0.31
27 AT1G42220 transposable element gene -0.58 0.3 -0.33
28 AT4G00820 IQ-domain 17 IQ-domain 17 0.58 0.31 -0.31
29 AT1G34530 transposable element gene -0.57 0.32 -0.31
30 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 0.57 0.31 -0.31
31 AT1G69100 Eukaryotic aspartyl protease family protein -0.57 0.33 -0.31
32 AT3G50960 phosducin-like protein 3 homolog phosducin-like protein 3 homolog 0.57 0.33 -0.27
33 AT3G10390 Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D 0.57 0.33 -0.32
34 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.56 0.34 -0.31
35 AT3G05980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits
to 202 proteins in 28 species: Archae - 0; Bacteria - 0;
Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.56 0.32 -0.31
36 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 -0.56 0.31 -0.32
37 AT5G61520 Major facilitator superfamily protein -0.56 0.32 -0.32
38 AT1G73440 calmodulin-related -0.55 0.32 -0.32
39 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.3 -0.32
40 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 0.55 0.29 -0.29
41 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.55 0.3 -0.31
42 AT3G47570 Leucine-rich repeat protein kinase family protein -0.55 0.3 -0.31
43 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.54 0.3 -0.32
44 AT1G03370 C2 calcium/lipid-binding and GRAM domain containing protein -0.54 0.32 -0.33
45 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.54 0.31 -0.32
46 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 -0.54 0.31 -0.32
47 AT5G56250 hapless 8 HAPLESS 8 -0.54 0.33 -0.31
48 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.31 -0.33
49 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 -0.54 0.3 -0.33
50 AT5G39785 Protein of unknown function (DUF1666) -0.54 0.29 -0.32
51 AT1G50970 Membrane trafficking VPS53 family protein -0.53 0.33 -0.31
52 AT4G08470 MAPK/ERK kinase kinase 3 MAPKKK10, MAPK/ERK kinase kinase 3 -0.53 0.31 -0.28
53 AT2G47900 tubby like protein 3 tubby like protein 3, tubby like
protein 3		 0.53 0.33 -0.33
54 AT1G19380 Protein of unknown function (DUF1195) -0.53 0.32 -0.3
55 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 0.53 0.28 -0.3
56 AT2G01890 purple acid phosphatase 8 PURPLE ACID PHOSPHATASE 8, purple
acid phosphatase 8		 0.53 0.3 -0.29
57 AT4G30430 tetraspanin9 tetraspanin9 -0.53 0.34 -0.3
58 AT4G04550 transposable element gene 0.52 0.35 -0.32
59 AT5G01890 Leucine-rich receptor-like protein kinase family protein 0.52 0.32 -0.32
60 AT2G38080 Laccase/Diphenol oxidase family protein ARABIDOPSIS LACCASE-LIKE
MULTICOPPER OXIDASE 4, IRREGULAR
XYLEM 12, LACCASE 4, LACCASE-LIKE
MULTICOPPER OXIDASE 4		 0.52 0.31 -0.29
61 AT2G39320 Cysteine proteinases superfamily protein -0.52 0.31 -0.31
62 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 0.52 0.31 -0.32
63 AT3G52430 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS PHYTOALEXIN DEFICIENT
4, PHYTOALEXIN DEFICIENT 4		 -0.52 0.3 -0.3
64 AT5G18350 Disease resistance protein (TIR-NBS-LRR class) family -0.51 0.3 -0.32
65 AT5G41820 RAB geranylgeranyl transferase alpha subunit 2 RAB geranylgeranyl transferase
alpha subunit 2, RAB
geranylgeranyl transferase alpha
subunit 2		 -0.51 0.32 -0.33
66 AT1G23380 KNOTTED1-like homeobox gene 6 KNOTTED1-like homeobox gene 6,
KNAT6L, KNAT6S		 0.51 0.32 -0.31
67 AT1G13750 Purple acid phosphatases superfamily protein -0.51 0.3 -0.32
68 AT5G19090 Heavy metal transport/detoxification superfamily protein 0.51 0.35 -0.3
69 AT3G55060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast
hits to 33720 proteins in 2065 species: Archae - 846;
Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants -
3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI
BLink).		 0.51 0.3 -0.3
70 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 -0.51 0.31 -0.3
71 AT1G47610 Transducin/WD40 repeat-like superfamily protein -0.51 0.32 -0.31
72 AT1G30790 F-box and associated interaction domains-containing protein -0.51 0.31 -0.32
73 AT3G48640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF677
(InterPro:IPR007749); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF677)
(TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.32 -0.32
74 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 -0.5 0.32 -0.3
75 AT3G47480 Calcium-binding EF-hand family protein -0.5 0.32 -0.31
76 AT1G35560 TCP family transcription factor -0.49 0.32 -0.32
77 AT2G10640 transposable element gene -0.49 0.31 -0.31
78 AT3G23650 protein kinase-related -0.49 0.32 -0.32
79 AT1G34180 NAC domain containing protein 16 NAC domain containing protein 16,
NAC domain containing protein 16		 -0.49 0.31 -0.32
80 AT4G24210 F-box family protein SLEEPY1 -0.49 0.33 -0.31
81 AT5G42955 Protein of unknown function (DUF784) -0.49 0.31 -0.29
82 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.49 0.33 -0.32
83 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 -0.48 0.32 -0.34
84 AT3G42300 transposable element gene -0.48 0.31 -0.31
85 AT1G49260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: mechanosensitive channel of small
conductance-like 5 (TAIR:AT3G14810.1); Has 140 Blast hits
to 140 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.31 -0.32
86 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.48 0.33 -0.32
87 AT1G01560 MAP kinase 11 MAP kinase 11, MAP kinase 11 -0.48 0.29 -0.33
88 AT1G67470 Protein kinase superfamily protein -0.48 0.29 -0.32
89 AT1G29230 CBL-interacting protein kinase 18 ATCIPK18, WPL4-LIKE 1,
CBL-interacting protein kinase 18,
SNF1-RELATED PROTEIN KINASE 3.20,
WPL4-LIKE 1		 -0.48 0.29 -0.33
90 AT5G36160 Tyrosine transaminase family protein -0.48 0.31 -0.29
91 AT2G23960 Class I glutamine amidotransferase-like superfamily protein -0.48 0.31 -0.32
92 AT3G07040 NB-ARC domain-containing disease resistance protein RESISTANCE TO P. SYRINGAE PV
MACULICOLA 1, RESISTANCE TO
PSEUDOMONAS SYRINGAE 3		 -0.48 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0173 MST_2301.7 - - - 0.76 0.44 -0.46
94 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.67 0.5 -0.44 C0248
95 C0082 Digalactosyldiacylglycerol-36:3 - Digalactosyldiacylglycerol-36:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.65 0.49 -0.52 C0082
96 C0089 Fortunellin - - - 0.59 0.42 -0.46