AGICode | AT5G63670 |
Description | SPT4 homolog 2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G63670 | SPT4 homolog 2 | SPT4 homolog 2 | 1 | 0.3 | -0.36 | ||
2 | AT3G06070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.31 | -0.33 | |||
3 | AT3G48020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.83 | 0.31 | -0.3 | |||
4 | AT4G28570 | Long-chain fatty alcohol dehydrogenase family protein | -0.81 | 0.3 | -0.31 | |||
5 | AT4G34230 | cinnamyl alcohol dehydrogenase 5 | cinnamyl alcohol dehydrogenase 5, cinnamyl alcohol dehydrogenase 5, cinnamyl alcohol dehydrogenase 5 |
-0.8 | 0.35 | -0.32 | ||
6 | AT3G20250 | pumilio 5 | pumilio 5, pumilio 5 | -0.8 | 0.31 | -0.33 | ||
7 | AT2G22260 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | 0.8 | 0.31 | -0.31 | |||
8 | AT4G26840 | small ubiquitin-like modifier 1 | ARABIDOPSIS THALIANA SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, small ubiquitin-like modifier 1 |
0.8 | 0.32 | -0.3 | ||
9 | AT3G23710 | Tic22-like family protein | translocon at the inner envelope membrane of chloroplasts 22-III, translocon at the inner envelope membrane of chloroplasts 22-III |
0.8 | 0.32 | -0.31 | ||
10 | AT5G11110 | sucrose phosphate synthase 2F | sucrose phosphate synthase 2F, KAONASHI 2, SUCROSE PHOSPHATE SYNTHASE 1, sucrose phosphate synthase 2F, sucrose-phosphate synthase A2 |
-0.79 | 0.31 | -0.32 | ||
11 | AT4G17540 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.79 | 0.31 | -0.32 | |||
12 | AT3G45850 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.79 | 0.31 | -0.34 | |||
13 | AT2G27130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.79 | 0.33 | -0.29 | |||
14 | AT2G41600 | Mitochondrial glycoprotein family protein | 0.78 | 0.35 | -0.33 | |||
15 | AT3G11750 | Dihydroneopterin aldolase | FOLB1 | 0.78 | 0.31 | -0.32 | ||
16 | AT5G41760 | Nucleotide-sugar transporter family protein | 0.78 | 0.31 | -0.31 | |||
17 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
0.78 | 0.31 | -0.29 | ||
18 | AT4G36770 | UDP-Glycosyltransferase superfamily protein | 0.78 | 0.31 | -0.32 | |||
19 | AT1G54100 | aldehyde dehydrogenase 7B4 | aldehyde dehydrogenase 7B4 | -0.78 | 0.32 | -0.32 | ||
20 | AT2G35190 | novel plant snare 11 | ATNPSN11, novel plant snare 11, NSPN11 |
0.78 | 0.3 | -0.31 | ||
21 | AT2G42900 | Plant basic secretory protein (BSP) family protein | 0.78 | 0.32 | -0.33 | |||
22 | AT3G57080 | Eukaryotic rpb5 RNA polymerase subunit family protein | NRPE5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, B |
0.78 | 0.32 | -0.3 | ||
23 | AT1G17850 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.78 | 0.33 | -0.31 | |||
24 | AT1G78610 | mechanosensitive channel of small conductance-like 6 | mechanosensitive channel of small conductance-like 6 |
-0.78 | 0.33 | -0.31 | ||
25 | AT2G33330 | plasmodesmata-located protein 3 | plasmodesmata-located protein 3 | 0.78 | 0.33 | -0.33 | ||
26 | AT4G35790 | phospholipase D delta | ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA, phospholipase D delta |
-0.77 | 0.31 | -0.31 | ||
27 | AT4G09550 | AtGCP3 interacting protein 1 | ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1, AtGCP3 interacting protein 1 |
0.77 | 0.32 | -0.3 | ||
28 | AT5G16870 | Peptidyl-tRNA hydrolase II (PTH2) family protein | 0.77 | 0.32 | -0.33 | |||
29 | AT5G62980 | Dihydroneopterin aldolase | FOLB2 | 0.77 | 0.32 | -0.3 | ||
30 | AT1G48370 | YELLOW STRIPE like 8 | YELLOW STRIPE like 8 | -0.77 | 0.33 | -0.3 | ||
31 | AT4G28980 | CDK-activating kinase 1AT | CDK-activating kinase 1AT, CYCLIN-DEPENDENT KINASE F;1 |
0.77 | 0.3 | -0.3 | ||
32 | AT4G15790 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). |
0.77 | 0.3 | -0.33 | |||
33 | AT5G51460 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
ATTPPA | 0.77 | 0.31 | -0.31 | ||
34 | AT3G22880 | DNA repair (Rad51) family protein | ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DISRUPTION OF MEIOTIC CONTROL 1 |
0.77 | 0.3 | -0.32 | ||
35 | AT3G06140 | RING/U-box superfamily protein | 0.77 | 0.31 | -0.33 | |||
36 | AT3G23880 | F-box and associated interaction domains-containing protein | 0.77 | 0.34 | -0.3 | |||
37 | AT1G79270 | evolutionarily conserved C-terminal region 8 | evolutionarily conserved C-terminal region 8 |
-0.76 | 0.31 | -0.3 | ||
38 | AT5G57700 | BNR/Asp-box repeat family protein | 0.76 | 0.3 | -0.32 | |||
39 | AT2G33590 | NAD(P)-binding Rossmann-fold superfamily protein | -0.76 | 0.31 | -0.3 | |||
40 | AT4G24780 | Pectin lyase-like superfamily protein | 0.76 | 0.33 | -0.34 | |||
41 | AT1G23480 | cellulose synthase-like A3 | cellulose synthase-like A3, ATCSLA3, CSLA03, cellulose synthase-like A3, CELLULOSE SYNTHASE-LIKE A3 |
0.76 | 0.3 | -0.31 | ||
42 | AT5G06790 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.76 | 0.31 | -0.34 | |||
43 | AT1G09160 | Protein phosphatase 2C family protein | 0.76 | 0.34 | -0.32 | |||
44 | AT4G27830 | beta glucosidase 10 | beta glucosidase 10 | -0.76 | 0.34 | -0.29 | ||
45 | AT5G50890 | alpha/beta-Hydrolases superfamily protein | 0.76 | 0.31 | -0.31 | |||
46 | AT4G37280 | MRG family protein | 0.76 | 0.31 | -0.34 | |||
47 | AT5G49280 | hydroxyproline-rich glycoprotein family protein | -0.76 | 0.32 | -0.31 | |||
48 | AT1G62570 | flavin-monooxygenase glucosinolate S-oxygenase 4 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
-0.76 | 0.3 | -0.31 | ||
49 | AT1G66940 | protein kinase-related | 0.76 | 0.32 | -0.31 | |||
50 | AT3G11420 | Protein of unknown function (DUF604) | -0.76 | 0.32 | -0.32 | |||
51 | AT1G70985 | hydroxyproline-rich glycoprotein family protein | 0.76 | 0.32 | -0.33 | |||
52 | AT3G18210 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.75 | 0.31 | -0.33 | |||
53 | AT1G29530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34310.3); Has 84 Blast hits to 78 proteins in 24 species: Archae - 2; Bacteria - 4; Metazoa - 9; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.75 | 0.3 | -0.31 | |||
54 | AT1G32130 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6), HIGH NITROGEN INSENSITIVE 9, IWS1 |
-0.75 | 0.3 | -0.3 | ||
55 | AT2G04350 | AMP-dependent synthetase and ligase family protein | long-chain acyl-CoA synthetase 8 | -0.75 | 0.33 | -0.32 | ||
56 | AT5G06770 | KH domain-containing protein / zinc finger (CCCH type) family protein |
0.75 | 0.32 | -0.33 | |||
57 | AT2G30520 | Phototropic-responsive NPH3 family protein | ROOT PHOTOTROPISM 2 | 0.75 | 0.3 | -0.33 | ||
58 | AT2G22010 | related to KPC1 | related to KPC1 | -0.74 | 0.31 | -0.33 | ||
59 | AT1G32960 | Subtilase family protein | ATSBT3.3, SBT3.3 | -0.74 | 0.33 | -0.32 | ||
60 | AT5G43070 | WPP domain protein 1 | WPP domain protein 1 | 0.74 | 0.3 | -0.32 | ||
61 | AT4G15530 | pyruvate orthophosphate dikinase | pyruvate orthophosphate dikinase | -0.74 | 0.33 | -0.32 | ||
62 | AT3G14080 | Small nuclear ribonucleoprotein family protein | 0.74 | 0.32 | -0.31 | |||
63 | AT2G16720 | myb domain protein 7 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, myb domain protein 7 |
-0.74 | 0.31 | -0.32 | ||
64 | AT1G12020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.74 | 0.33 | -0.32 | |||
65 | AT3G20790 | NAD(P)-binding Rossmann-fold superfamily protein | 0.74 | 0.32 | -0.31 | |||
66 | AT5G55260 | protein phosphatase X 2 | PROTEIN PHOSPHATASE X -2, protein phosphatase X 2 |
0.74 | 0.29 | -0.31 | ||
67 | AT3G04240 | Tetratricopeptide repeat (TPR)-like superfamily protein | secret agent | -0.74 | 0.3 | -0.29 | ||
68 | AT4G15490 | UDP-Glycosyltransferase superfamily protein | UGT84A3 | -0.74 | 0.33 | -0.31 | ||
69 | AT1G34010 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.34 | -0.33 | |||
70 | AT5G26820 | iron-regulated protein 3 | iron-regulated protein 3, IRON REGULATED 3, iron-regulated protein 3, MULTIPLE ANTIBIOTIC RESISTANCE 1, RTS3 |
0.74 | 0.3 | -0.31 | ||
71 | AT3G10320 | Glycosyltransferase family 61 protein | -0.74 | 0.32 | -0.31 | |||
72 | AT1G74690 | IQ-domain 31 | IQ-domain 31 | 0.74 | 0.32 | -0.32 | ||
73 | AT3G53170 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.74 | 0.31 | -0.3 | |||
74 | AT1G26100 | Cytochrome b561/ferric reductase transmembrane protein family |
0.74 | 0.32 | -0.34 | |||
75 | AT3G62590 | alpha/beta-Hydrolases superfamily protein | -0.73 | 0.32 | -0.32 | |||
76 | AT2G18170 | MAP kinase 7 | MAP kinase 7, MAP kinase 7 | -0.73 | 0.3 | -0.3 | ||
77 | AT1G76590 | PLATZ transcription factor family protein | -0.72 | 0.32 | -0.32 | |||
78 | AT3G12580 | heat shock protein 70 | ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 |
-0.72 | 0.31 | -0.29 | ||
79 | AT5G63450 | cytochrome P450, family 94, subfamily B, polypeptide 1 | cytochrome P450, family 94, subfamily B, polypeptide 1 |
-0.72 | 0.33 | -0.35 | ||
80 | AT1G03790 | Zinc finger C-x8-C-x5-C-x3-H type family protein | SOMNUS | -0.72 | 0.33 | -0.3 | ||
81 | AT2G11520 | calmodulin-binding receptor-like cytoplasmic kinase 3 | calmodulin-binding receptor-like cytoplasmic kinase 3 |
-0.72 | 0.32 | -0.3 | ||
82 | AT1G05340 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.33 | -0.32 | |||
83 | AT1G48000 | myb domain protein 112 | myb domain protein 112, myb domain protein 112 |
-0.71 | 0.34 | -0.29 | ||
84 | AT3G57020 | Calcium-dependent phosphotriesterase superfamily protein | -0.71 | 0.31 | -0.32 | |||
85 | AT3G04010 | O-Glycosyl hydrolases family 17 protein | -0.71 | 0.31 | -0.33 | |||
86 | AT2G30550 | alpha/beta-Hydrolases superfamily protein | -0.71 | 0.3 | -0.32 | |||
87 | AT5G11210 | glutamate receptor 2.5 | ARABIDOPSIS THALIANA GLU, glutamate receptor 2.5 |
-0.7 | 0.33 | -0.31 | ||
88 | AT2G22970 | serine carboxypeptidase-like 11 | serine carboxypeptidase-like 11 | -0.7 | 0.32 | -0.29 | ||
89 | AT5G23850 | Arabidopsis thaliana protein of unknown function (DUF821) | -0.7 | 0.31 | -0.31 | |||
90 | AT5G09620 | Octicosapeptide/Phox/Bem1p family protein | -0.7 | 0.31 | -0.34 | |||
91 | AT5G53120 | spermidine synthase 3 | SPERMIDINE SYNTHASE 3, spermidine synthase 3, SPMS |
-0.7 | 0.31 | -0.31 | ||
92 | AT5G54300 | Protein of unknown function (DUF761) | -0.7 | 0.32 | -0.31 | |||
93 | AT4G18700 | CBL-interacting protein kinase 12 | WPL4-LIKE 4, CBL-interacting protein kinase 12, SNF1-RELATED PROTEIN KINASE 3.9, WPL4-LIKE 4 |
-0.69 | 0.32 | -0.33 | ||
94 | AT4G30460 | glycine-rich protein | -0.69 | 0.3 | -0.33 | |||
95 | AT1G74250 | DNAJ heat shock N-terminal domain-containing protein | -0.69 | 0.32 | -0.33 | |||
96 | AT5G54960 | pyruvate decarboxylase-2 | pyruvate decarboxylase-2 | -0.69 | 0.3 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
97 | C0017 | sn-Glycero-3-phosphocholine | sn-Glycero-3-phosphocholine | L-1-Glycero-3-phosphocholine | - | -0.83 | 0.46 | -0.42 | ||
98 | C0241 | Stigmasterol 3-O-β-D-glucoside | - | Stigmasterol 3-O-β-D-glucoside | - | -0.81 | 0.53 | -0.48 | ||
99 | C0010 | myo-Inositol-1-phosphate | D,L-myo-Inositol-1-phosphate | 1D-myo-Inositol (3)-phosphate | myo-inositol biosynthesis, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) |
0.75 | 0.44 | -0.47 |