AGICode | AT5G63520 |
Description | CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G63520 | CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
1 | 0.32 | -0.3 | |||
2 | AT1G23180 | ARM repeat superfamily protein | 0.76 | 0.32 | -0.31 | |||
3 | AT2G38480 | Uncharacterised protein family (UPF0497) | -0.74 | 0.31 | -0.32 | |||
4 | AT5G43120 | ARM-repeat/Tetratricopeptide repeat (TPR)-like protein | 0.72 | 0.32 | -0.32 | |||
5 | AT3G10140 | RECA homolog 3 | RECA homolog 3 | 0.71 | 0.3 | -0.3 | ||
6 | AT3G61700 | Plant protein 1589 of unknown function | 0.71 | 0.33 | -0.31 | |||
7 | AT5G01780 | 2-oxoglutarate-dependent dioxygenase family protein | 0.68 | 0.33 | -0.33 | |||
8 | AT3G06230 | MAP kinase kinase 8 | MAP kinase kinase 8, MAP kinase kinase 8 |
0.68 | 0.31 | -0.32 | ||
9 | AT1G67770 | terminal EAR1-like 2 | terminal EAR1-like 2 | 0.68 | 0.31 | -0.33 | ||
10 | AT1G70460 | root hair specific 10 | proline-rich extensin-like receptor kinase 13, proline-rich extensin-like receptor kinase 13, root hair specific 10 |
-0.68 | 0.31 | -0.33 | ||
11 | AT5G15570 | Bromodomain transcription factor | 0.67 | 0.33 | -0.35 | |||
12 | AT4G33670 | NAD(P)-linked oxidoreductase superfamily protein | 0.67 | 0.31 | -0.31 | |||
13 | ATMG00640 | hydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding |
ORF25 | -0.67 | 0.31 | -0.33 | ||
14 | AT5G17150 | Cystatin/monellin superfamily protein | 0.66 | 0.31 | -0.33 | |||
15 | AT1G42420 | transposable element gene | -0.66 | 0.31 | -0.31 | |||
16 | AT2G25710 | holocarboxylase synthase 1 | holocarboxylase synthase 1 | 0.66 | 0.31 | -0.3 | ||
17 | AT3G56830 | Protein of unknown function (DUF565) | 0.64 | 0.33 | -0.33 | |||
18 | AT3G02670 | Glycine-rich protein family | -0.64 | 0.34 | -0.33 | |||
19 | AT5G54090 | DNA mismatch repair protein MutS, type 2 | 0.64 | 0.32 | -0.32 | |||
20 | AT1G04700 | PB1 domain-containing protein tyrosine kinase | -0.63 | 0.33 | -0.31 | |||
21 | AT1G22540 | Major facilitator superfamily protein | 0.63 | 0.3 | -0.33 | |||
22 | AT3G63460 | transducin family protein / WD-40 repeat family protein | -0.63 | 0.32 | -0.31 | |||
23 | AT2G47010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.62 | 0.31 | -0.3 | |||
24 | AT3G05890 | Low temperature and salt responsive protein family | RARE-COLD-INDUCIBLE 2B | -0.62 | 0.32 | -0.29 | ||
25 | AT1G19220 | auxin response factor 19 | AUXIN RESPONSE FACTOR11, auxin response factor 19, indole-3-acetic acid inducible 22 |
-0.62 | 0.31 | -0.3 | ||
26 | AT5G15890 | TRICHOME BIREFRINGENCE-LIKE 21 | TRICHOME BIREFRINGENCE-LIKE 21 | -0.62 | 0.29 | -0.3 | ||
27 | AT5G24710 | Transducin/WD40 repeat-like superfamily protein | -0.62 | 0.32 | -0.32 | |||
28 | AT1G08340 | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain |
-0.62 | 0.31 | -0.3 | |||
29 | AT1G27520 | Glycosyl hydrolase family 47 protein | 0.62 | 0.32 | -0.32 | |||
30 | AT1G30950 | F-box family protein | UNUSUAL FLORAL ORGANS | 0.62 | 0.32 | -0.32 | ||
31 | AT5G15460 | membrane-anchored ubiquitin-fold protein 2 | membrane-anchored ubiquitin-fold protein 2 |
0.62 | 0.33 | -0.32 | ||
32 | AT2G10900 | transposable element gene | 0.62 | 0.31 | -0.32 | |||
33 | AT4G23730 | Galactose mutarotase-like superfamily protein | 0.61 | 0.29 | -0.33 | |||
34 | AT5G60760 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.61 | 0.32 | -0.31 | |||
35 | AT5G24880 | BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.32 | -0.32 | |||
36 | AT3G20080 | cytochrome P450, family 705, subfamily A, polypeptide 15 | cytochrome P450, family 705, subfamily A, polypeptide 15 |
-0.61 | 0.32 | -0.32 | ||
37 | AT5G34870 | zinc knuckle (CCHC-type) family protein | 0.61 | 0.33 | -0.33 | |||
38 | AT3G42630 | Pentatricopeptide repeat (PPR) superfamily protein | 0.61 | 0.31 | -0.3 | |||
39 | AT2G38900 | Serine protease inhibitor, potato inhibitor I-type family protein |
0.61 | 0.31 | -0.31 | |||
40 | AT1G73690 | cyclin-dependent kinase D1;1 | CYCLIN-DEPENDENT KINASE D1, CAK3AT, cyclin-dependent kinase D1;1 |
-0.61 | 0.32 | -0.34 | ||
41 | ATMG01000 | hypothetical protein | ORF114 | -0.61 | 0.3 | -0.33 | ||
42 | AT5G57620 | myb domain protein 36 | myb domain protein 36, myb domain protein 36 |
-0.61 | 0.3 | -0.32 | ||
43 | AT4G21490 | NAD(P)H dehydrogenase B3 | NAD(P)H dehydrogenase B3 | -0.61 | 0.31 | -0.32 | ||
44 | AT1G66310 | F-box/RNI-like/FBD-like domains-containing protein | 0.6 | 0.31 | -0.33 | |||
45 | AT1G53160 | squamosa promoter binding protein-like 4 | squamosa promoter binding protein-like 4 |
0.6 | 0.33 | -0.32 | ||
46 | AT2G14590 | transposable element gene | 0.6 | 0.3 | -0.33 | |||
47 | AT2G39260 | binding;RNA binding | -0.6 | 0.32 | -0.31 | |||
48 | AT3G18930 | RING/U-box superfamily protein | 0.6 | 0.3 | -0.32 | |||
49 | AT5G65140 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase J |
-0.6 | 0.31 | -0.3 | ||
50 | AT2G11120 | transposable element gene | 0.6 | 0.32 | -0.33 | |||
51 | AT2G36440 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.31 | -0.33 | |||
52 | AT2G45400 | NAD(P)-binding Rossmann-fold superfamily protein | BEN1 | -0.6 | 0.3 | -0.31 | ||
53 | AT2G16190 | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.6 | 0.32 | -0.36 | |||
54 | AT1G63990 | sporulation 11-2 | sporulation 11-2 | 0.6 | 0.31 | -0.32 | ||
55 | AT4G30670 | Putative membrane lipoprotein | -0.6 | 0.3 | -0.33 | |||
56 | AT1G33400 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 9 | 0.6 | 0.3 | -0.33 | ||
57 | AT4G03580 | BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT5G17080.1); Has 155 Blast hits to 136 proteins in 31 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 14; Plants - 17; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). |
0.59 | 0.3 | -0.32 | |||
58 | AT3G01580 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.59 | 0.29 | -0.3 | |||
59 | AT3G57785 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.59 | 0.32 | -0.33 | |||
60 | AT5G61650 | CYCLIN P4;2 | CYCP4, CYCLIN P4;2 | -0.59 | 0.32 | -0.32 | ||
61 | AT5G16610 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.59 | 0.29 | -0.31 | |||
62 | AT5G54220 | Cysteine-rich protein | 0.59 | 0.3 | -0.33 | |||
63 | AT5G61350 | Protein kinase superfamily protein | -0.58 | 0.33 | -0.3 | |||
64 | AT3G10780 | emp24/gp25L/p24 family/GOLD family protein | -0.58 | 0.31 | -0.33 | |||
65 | AT4G37400 | cytochrome P450, family 81, subfamily F, polypeptide 3 | cytochrome P450, family 81, subfamily F, polypeptide 3 |
-0.58 | 0.3 | -0.32 | ||
66 | AT1G26970 | Protein kinase superfamily protein | -0.58 | 0.32 | -0.31 | |||
67 | AT4G13800 | Protein of unknown function (DUF803) | -0.57 | 0.32 | -0.31 | |||
68 | AT4G13130 | Cysteine/Histidine-rich C1 domain family protein | -0.57 | 0.35 | -0.31 | |||
69 | AT5G56880 | unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.36 | |||
70 | AT1G51210 | UDP-Glycosyltransferase superfamily protein | -0.57 | 0.31 | -0.3 | |||
71 | AT1G28080 | RING finger protein | -0.57 | 0.32 | -0.31 | |||
72 | AT4G14815 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.57 | 0.32 | -0.33 | |||
73 | AT1G64930 | cytochrome P450, family 87, subfamily A, polypeptide 7 | cytochrome P450, family 87, subfamily A, polypeptide 7 |
-0.57 | 0.32 | -0.31 | ||
74 | AT4G00150 | GRAS family transcription factor | ARABIDOPSIS THALIANA HAIRY MERISTEM 3, HAIRY MERISTEM 3, LOST MERISTEMS 3 |
-0.55 | 0.29 | -0.33 | ||
75 | AT1G61460 | S-locus protein kinase, putative | -0.55 | 0.33 | -0.31 | |||
76 | AT5G55980 | serine-rich protein-related | -0.55 | 0.31 | -0.33 | |||
77 | AT2G37980 | O-fucosyltransferase family protein | -0.55 | 0.31 | -0.29 | |||
78 | AT1G09150 | pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein |
-0.55 | 0.31 | -0.29 | |||
79 | AT5G57520 | zinc finger protein 2 | ZINC FINGER PROTEIN 2, zinc finger protein 2 |
-0.55 | 0.31 | -0.32 | ||
80 | AT2G48030 | DNAse I-like superfamily protein | -0.55 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
81 | C0153 | Monogalactosyldiacylgycerol-34:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.76 | 0.44 | -0.48 | ||
82 | C0074 | Cystine | L-Cystine | L-Cystine | protein precursor | -0.74 | 0.45 | -0.44 | ||
83 | C0240 | Stigmasterol | - | Stigmasterol | plant sterol biosynthesis | -0.64 | 0.43 | -0.45 | ||
84 | C0090 | Fructose | D-(-)-Fructose | D-Fructose | sorbitol degradation I, fructan degradation |
-0.6 | 0.31 | -0.32 | ||
85 | C0201 | Phosphatidylglycerol-32:1 | - | Phosphatidylglycerol-32:1 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.59 | 0.33 | -0.34 |