AT5G62000 : ARF1-BINDING PROTEIN
Query Information
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AGICode AT5G62000
Description auxin response factor 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 1 0.3 -0.31
2 AT3G10090 Nucleic acid-binding, OB-fold-like protein -0.81 0.31 -0.29
3 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.8 0.33 -0.32
4 AT5G65650 Protein of unknown function (DUF1195) -0.79 0.32 -0.3
5 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 0.78 0.32 -0.3
6 AT1G14980 chaperonin 10 chaperonin 10 -0.78 0.31 -0.31
7 AT2G37130 Peroxidase superfamily protein -0.77 0.3 -0.35
8 AT3G02190 Ribosomal protein L39 family protein -0.77 0.29 -0.3
9 AT2G44790 uclacyanin 2 uclacyanin 2 -0.77 0.31 -0.32
10 AT3G13040 myb-like HTH transcriptional regulator family protein 0.77 0.31 -0.32
11 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.77 0.3 -0.3
12 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.76 0.32 -0.3
13 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 -0.76 0.32 -0.32
14 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 0.76 0.33 -0.31
15 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.76 0.32 -0.29
16 AT3G19620 Glycosyl hydrolase family protein 0.75 0.32 -0.3
17 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.75 0.31 -0.32
18 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 -0.75 0.31 -0.31
19 AT4G31985 Ribosomal protein L39 family protein -0.75 0.31 -0.33
20 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.75 0.34 -0.31
21 AT3G27620 alternative oxidase 1C alternative oxidase 1C -0.75 0.3 -0.32
22 AT5G22440 Ribosomal protein L1p/L10e family -0.74 0.29 -0.29
23 AT3G47370 Ribosomal protein S10p/S20e family protein -0.74 0.3 -0.34
24 AT2G25210 Ribosomal protein L39 family protein -0.74 0.31 -0.31
25 AT1G74270 Ribosomal protein L35Ae family protein -0.74 0.32 -0.28
26 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.74 0.31 -0.31
27 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 -0.74 0.31 -0.31
28 AT2G44270 repressor of lrx1 repressor of lrx1 -0.73 0.33 -0.31
29 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.73 0.32 -0.32
30 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 -0.73 0.33 -0.28
31 AT5G41520 RNA binding Plectin/S10 domain-containing protein -0.73 0.32 -0.33
32 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.73 0.3 -0.31
33 AT2G39390 Ribosomal L29 family protein -0.73 0.33 -0.32
34 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 -0.73 0.32 -0.29
35 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 -0.73 0.33 -0.31
36 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein 0.73 0.3 -0.32
37 AT1G15250 Zinc-binding ribosomal protein family protein -0.72 0.31 -0.32
38 AT2G28660 Chloroplast-targeted copper chaperone protein -0.72 0.33 -0.32
39 AT1G18540 Ribosomal protein L6 family protein -0.72 0.33 -0.33
40 AT5G57290 60S acidic ribosomal protein family -0.72 0.32 -0.31
41 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.72 0.31 -0.31
42 AT5G02050 Mitochondrial glycoprotein family protein -0.72 0.31 -0.32
43 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 0.72 0.3 -0.33
44 AT3G01790 Ribosomal protein L13 family protein -0.72 0.31 -0.31
45 AT2G42850 cytochrome P450, family 718 cytochrome P450, family 718 -0.71 0.31 -0.32
46 AT1G14040 EXS (ERD1/XPR1/SYG1) family protein -0.71 0.3 -0.32
47 AT3G56050 Protein kinase family protein 0.71 0.32 -0.31
48 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 0.71 0.31 -0.3
49 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 -0.71 0.31 -0.31
50 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.31
51 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 0.71 0.32 -0.32
52 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 -0.71 0.31 -0.31
53 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 0.71 0.34 -0.34
54 AT2G44120 Ribosomal protein L30/L7 family protein -0.7 0.31 -0.31
55 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.7 0.32 -0.3
56 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 -0.7 0.32 -0.32
57 AT5G05990 Mitochondrial glycoprotein family protein -0.7 0.3 -0.3
58 AT4G16750 Integrase-type DNA-binding superfamily protein 0.7 0.3 -0.29
59 AT1G26740 Ribosomal L32p protein family -0.7 0.35 -0.32
60 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 -0.7 0.28 -0.32
61 AT4G08460 Protein of unknown function (DUF1644) -0.7 0.3 -0.31
62 AT2G39450 Cation efflux family protein ATMTP11, MTP11 0.7 0.29 -0.33
63 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.33
64 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 0.7 0.33 -0.34
65 AT4G02230 Ribosomal protein L19e family protein -0.7 0.34 -0.33
66 AT5G62130 Per1-like family protein 0.69 0.32 -0.31
67 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.69 0.31 -0.35
68 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.69 0.32 -0.33
69 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 -0.69 0.31 -0.32
70 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 -0.69 0.31 -0.32
71 AT5G51890 Peroxidase superfamily protein 0.69 0.33 -0.33
72 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 0.69 0.33 -0.3
73 AT4G11290 Peroxidase superfamily protein -0.69 0.3 -0.3
74 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 -0.69 0.31 -0.32
75 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.69 0.32 -0.31
76 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 0.69 0.32 -0.29
77 AT5G16470 zinc finger (C2H2 type) family protein -0.69 0.34 -0.31
78 AT4G17070 peptidyl-prolyl cis-trans isomerases -0.69 0.3 -0.29
79 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 -0.69 0.31 -0.32
80 AT2G20940 Protein of unknown function (DUF1279) -0.68 0.31 -0.32
81 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.68 0.31 -0.3
82 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 -0.68 0.3 -0.32
83 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.68 0.31 -0.31
84 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 -0.68 0.32 -0.3
85 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.68 0.32 -0.33
86 AT2G24420 DNA repair ATPase-related 0.68 0.33 -0.32
87 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A -0.68 0.3 -0.32
88 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 -0.68 0.31 -0.31
89 AT2G23930 probable small nuclear ribonucleoprotein G probable small nuclear
ribonucleoprotein G		 -0.68 0.31 -0.32
90 AT4G33865 Ribosomal protein S14p/S29e family protein -0.68 0.35 -0.32
91 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 0.68 0.31 -0.32
92 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 -0.68 0.33 -0.31
93 AT1G77750 Ribosomal protein S13/S18 family -0.68 0.28 -0.29
94 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 0.67 0.32 -0.31
95 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 0.67 0.3 -0.31
96 AT5G64120 Peroxidase superfamily protein -0.67 0.32 -0.31
97 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 0.67 0.3 -0.31
98 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.67 0.3 -0.33
99 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.32 -0.32
100 AT3G55605 Mitochondrial glycoprotein family protein -0.67 0.3 -0.31
101 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 -0.67 0.33 -0.31
102 AT4G02630 Protein kinase superfamily protein 0.67 0.33 -0.29
103 AT1G64880 Ribosomal protein S5 family protein -0.67 0.3 -0.3
104 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.31 -0.32
105 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 -0.67 0.31 -0.35
106 AT1G52160 tRNAse Z3 tRNAse Z3 -0.67 0.32 -0.3
107 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 -0.67 0.34 -0.3
108 AT3G12180 Cornichon family protein -0.67 0.31 -0.32
109 AT1G14210 Ribonuclease T2 family protein -0.67 0.31 -0.3
110 AT4G29430 ribosomal protein S15A E ribosomal protein S15A E -0.66 0.32 -0.32
111 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP -0.66 0.31 -0.3
112 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 -0.66 0.29 -0.31
113 AT2G45710 Zinc-binding ribosomal protein family protein -0.66 0.3 -0.33
114 AT2G42710 Ribosomal protein L1p/L10e family -0.66 0.33 -0.31
115 AT5G01880 RING/U-box superfamily protein 0.66 0.31 -0.32
116 AT4G38350 Patched family protein 0.66 0.33 -0.33
117 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 -0.66 0.32 -0.31
118 AT1G16870 mitochondrial 28S ribosomal protein S29-related -0.66 0.3 -0.32
119 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.29
120 AT3G22750 Protein kinase superfamily protein -0.66 0.32 -0.34
121 AT2G46470 inner membrane protein OXA1-like inner membrane protein OXA1-like -0.66 0.31 -0.3
122 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 0.66 0.29 -0.32
123 AT3G04390 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin
binding protein		 0.66 0.3 -0.31
124 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 -0.66 0.33 -0.3
125 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 0.66 0.31 -0.32
126 AT4G19410 Pectinacetylesterase family protein -0.66 0.32 -0.32
127 AT5G13420 Aldolase-type TIM barrel family protein -0.66 0.31 -0.31
128 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.31 -0.31
129 AT5G52660 Homeodomain-like superfamily protein 0.66 0.3 -0.33
130 AT1G75410 BEL1-like homeodomain 3 BEL1-like homeodomain 3 0.65 0.32 -0.31
131 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 0.65 0.3 -0.29
132 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 0.64 0.31 -0.31
133 AT5G49130 MATE efflux family protein 0.64 0.31 -0.3
134 AT2G43500 Plant regulator RWP-RK family protein 0.64 0.32 -0.33
135 AT5G14510 ARM repeat superfamily protein 0.64 0.32 -0.29
136 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 0.64 0.31 -0.29
137 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.64 0.32 -0.29
138 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein 0.64 0.31 -0.3
139 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 0.64 0.33 -0.34
140 AT3G14067 Subtilase family protein 0.63 0.32 -0.31
141 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily 0.63 0.33 -0.3
142 AT5G64090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Hyccin
(InterPro:IPR018619); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G21050.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.32 -0.32
143 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.63 0.33 -0.3
144 AT5G24080 Protein kinase superfamily protein 0.63 0.3 -0.28
145 AT1G51340 MATE efflux family protein 0.62 0.3 -0.31
146 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.62 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - 0.85 0.45 -0.47
148 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.82 0.48 -0.44 C0225
149 C0217 Putative glucosinole - - - -0.8 0.45 -0.47
150 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.76 0.45 -0.42 C0210
151 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		0.74 0.44 -0.46 C0057
152 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.72 0.42 -0.44 C0109
153 C0266 Xylose D-Xylose D-Xylose xylose degradation I 0.7 0.46 -0.45 C0266
154 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		0.68 0.31 -0.32 C0054
155 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.67 0.43 -0.46 C0011
156 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.66 0.42 -0.47 C0032