AT5G61410 : EMBRYO DEFECTIVE 2728
Query Information
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AGICode AT5G61410
Description D-ribulose-5-phosphate-3-epimerase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 1 0.29 -0.31
2 AT5G64940 ABC2 homolog 13 ARABIDOPSIS THALIANA ABC2 HOMOLOG
13, ABC2 homolog 13, A. THALIANA
OXIDATIVE STRESS-RELATED ABC1-LIKE
PROTEIN 1, OXIDATIVE
STRESS-RELATED ABC1-LIKE PROTEIN 1		 0.88 0.31 -0.33
3 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.87 0.31 -0.31
4 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.86 0.32 -0.33
5 AT3G60750 Transketolase 0.85 0.32 -0.31
6 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits
to 146 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.85 0.33 -0.3
7 AT2G26500 cytochrome b6f complex subunit (petM), putative 0.85 0.31 -0.28
8 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.85 0.32 -0.33
9 AT5G59250 Major facilitator superfamily protein 0.85 0.3 -0.3
10 AT1G50450 Saccharopine dehydrogenase 0.85 0.32 -0.3
11 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast inner membrane, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; Has 200 Blast hits to 200
proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa
- 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes
- 35 (source: NCBI BLink).		 0.84 0.31 -0.32
12 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.84 0.32 -0.31
13 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.83 0.31 -0.29
14 AT1G49010 Duplicated homeodomain-like superfamily protein 0.83 0.3 -0.3
15 AT3G01060 unknown protein; Has 640 Blast hits to 638 proteins in 201
species: Archae - 0; Bacteria - 293; Metazoa - 0; Fungi -
71; Plants - 72; Viruses - 0; Other Eukaryotes - 204
(source: NCBI BLink).		 0.83 0.3 -0.3
16 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.83 0.33 -0.32
17 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 0.83 0.31 -0.3
18 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.83 0.32 -0.3
19 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.82 0.29 -0.32
20 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.82 0.31 -0.3
21 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.82 0.32 -0.3
22 AT1G22850 SNARE associated Golgi protein family 0.82 0.32 -0.32
23 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.82 0.31 -0.3
24 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.81 0.31 -0.29
25 AT5G57960 GTP-binding protein, HflX 0.81 0.3 -0.31
26 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.81 0.31 -0.3
27 AT5G51010 Rubredoxin-like superfamily protein 0.8 0.3 -0.33
28 AT5G14740 carbonic anhydrase 2 BETA CARBONIC ANHYDRASE 2,
CARBONIC ANHYDRASE 18, carbonic
anhydrase 2		 0.8 0.31 -0.31
29 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.8 0.31 -0.33
30 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 0.79 0.31 -0.33
31 AT5G08410 ferredoxin/thioredoxin reductase subunit A (variable
subunit) 2		 ferredoxin/thioredoxin reductase
subunit A (variable subunit) 2		 0.79 0.31 -0.31
32 AT3G02450 cell division protein ftsH, putative 0.79 0.31 -0.34
33 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 0.79 0.33 -0.3
34 AT4G02920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits
to 41 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.3 -0.31
35 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 0.78 0.32 -0.35
36 AT5G15780 Pollen Ole e 1 allergen and extensin family protein 0.78 0.32 -0.31
37 AT1G32540 lsd one like 1 lsd one like 1 0.77 0.3 -0.3
38 AT1G32520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 143 Blast hits to 142
proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa -
39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink).		 0.77 0.32 -0.31
39 AT2G22880 VQ motif-containing protein -0.66 0.32 -0.32
40 AT4G17230 SCARECROW-like 13 SCARECROW-like 13 -0.66 0.32 -0.32
41 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.66 0.32 -0.3
42 AT5G58680 ARM repeat superfamily protein -0.65 0.32 -0.3
43 AT5G35940 Mannose-binding lectin superfamily protein -0.65 0.32 -0.3
44 AT3G15210 ethylene responsive element binding factor 4 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR 4, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
4, ethylene responsive element
binding factor 4, RELATED TO AP2 5		 -0.64 0.33 -0.3
45 AT2G35930 plant U-box 23 plant U-box 23 -0.64 0.31 -0.3
46 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.64 0.3 -0.33
47 AT3G53600 C2H2-type zinc finger family protein -0.64 0.32 -0.31
48 AT3G52400 syntaxin of plants 122 ATSYP122, syntaxin of plants 122 -0.64 0.31 -0.33
49 AT1G01110 IQ-domain 18 IQ-domain 18 -0.64 0.33 -0.31
50 AT3G23230 Integrase-type DNA-binding superfamily protein -0.64 0.32 -0.33
51 AT4G35580 NAC transcription factor-like 9 NAC transcription factor-like 9 -0.62 0.32 -0.3
52 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 -0.62 0.33 -0.31
53 AT1G59590 ZCF37 ZCF37 -0.62 0.3 -0.3
54 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 -0.62 0.3 -0.32
55 AT5G66930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1649 (InterPro:IPR012445); Has 236
Blast hits to 236 proteins in 105 species: Archae - 0;
Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 -0.61 0.31 -0.31
56 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.61 0.3 -0.32
57 AT4G23590 Tyrosine transaminase family protein -0.61 0.32 -0.31
58 AT1G05575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G31945.1); Has 63 Blast hits to 63 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.3 -0.32
59 AT2G36650 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.6 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
60 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.82 0.51 -0.48 C0241
61 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.78 0.42 -0.43 C0051