AGICode | AT5G61670 |
Description | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G61670 | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. |
1 | 0.32 | -0.31 | |||
2 | AT3G27925 | DegP protease 1 | DegP protease 1, DegP protease 1 | 0.86 | 0.31 | -0.33 | ||
3 | AT1G68830 | STT7 homolog STN7 | STT7 homolog STN7 | 0.81 | 0.31 | -0.33 | ||
4 | AT5G04140 | glutamate synthase 1 | FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, glutamate synthase 1, GLUS |
0.79 | 0.35 | -0.3 | ||
5 | AT1G29700 | Metallo-hydrolase/oxidoreductase superfamily protein | 0.78 | 0.3 | -0.33 | |||
6 | AT3G61080 | Protein kinase superfamily protein | 0.78 | 0.31 | -0.3 | |||
7 | AT5G05200 | Protein kinase superfamily protein | 0.78 | 0.31 | -0.3 | |||
8 | AT4G18810 | NAD(P)-binding Rossmann-fold superfamily protein | 0.78 | 0.31 | -0.3 | |||
9 | AT2G41120 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). |
0.77 | 0.32 | -0.3 | |||
10 | AT5G45170 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.77 | 0.33 | -0.31 | |||
11 | AT2G03390 | uvrB/uvrC motif-containing protein | 0.76 | 0.34 | -0.32 | |||
12 | AT2G24270 | aldehyde dehydrogenase 11A3 | aldehyde dehydrogenase 11A3 | 0.75 | 0.32 | -0.34 | ||
13 | AT2G38780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.75 | 0.32 | -0.31 | |||
14 | AT1G07010 | Calcineurin-like metallo-phosphoesterase superfamily protein |
AtSLP1, Shewenella-like protein phosphatase 1 |
0.75 | 0.31 | -0.31 | ||
15 | AT5G67030 | zeaxanthin epoxidase (ZEP) (ABA1) | ABA DEFICIENT 1, ARABIDOPSIS THALIANA ABA DEFICIENT 1, ARABIDOPSIS THALIANA ZEAXANTHIN EPOXIDASE, IMPAIRED IN BABA-INDUCED STERILITY 3, LOW EXPRESSION OF OSMOTIC STRESS-RESPONSIVE GENES 6, NON-PHOTOCHEMICAL QUENCHING 2, ZEAXANTHIN EPOXIDASE |
0.75 | 0.32 | -0.3 | ||
16 | AT1G77930 | Chaperone DnaJ-domain superfamily protein | 0.74 | 0.34 | -0.31 | |||
17 | AT4G13150 | unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.74 | 0.34 | -0.31 | |||
18 | AT1G76570 | Chlorophyll A-B binding family protein | 0.74 | 0.32 | -0.31 | |||
19 | AT5G37360 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.74 | 0.3 | -0.32 | |||
20 | AT4G37200 | Thioredoxin superfamily protein | HIGH CHLOROPHYLL FLUORESCENCE 164 | 0.74 | 0.3 | -0.33 | ||
21 | AT2G29650 | phosphate transporter 4;1 | anion transporter 1, phosphate transporter 4;1 |
0.73 | 0.31 | -0.32 | ||
22 | AT5G20220 | zinc knuckle (CCHC-type) family protein | 0.73 | 0.32 | -0.3 | |||
23 | AT1G50250 | FTSH protease 1 | FTSH protease 1 | 0.73 | 0.32 | -0.32 | ||
24 | AT5G04900 | NYC1-like | NYC1-like | 0.73 | 0.32 | -0.29 | ||
25 | AT5G04440 | Protein of unknown function (DUF1997) | 0.73 | 0.33 | -0.33 | |||
26 | AT5G51020 | crumpled leaf | constitutive activator of AAA-ATPase, CRUMPLED LEAF |
0.72 | 0.32 | -0.32 | ||
27 | AT5G35170 | adenylate kinase family protein | 0.72 | 0.32 | -0.32 | |||
28 | AT3G28760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 390 Blast hits to 390 proteins in 131 species: Archae - 144; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). |
0.72 | 0.32 | -0.33 | |||
29 | AT5G13770 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.72 | 0.3 | -0.35 | |||
30 | AT5G58870 | FTSH protease 9 | FTSH protease 9 | 0.72 | 0.32 | -0.3 | ||
31 | AT1G53670 | methionine sulfoxide reductase B 1 | ATMSRB1, methionine sulfoxide reductase B 1 |
0.72 | 0.32 | -0.31 | ||
32 | AT4G14210 | phytoene desaturase 3 | PIGMENT DEFECTIVE 226, PHYTOENE DESATURASE, phytoene desaturase 3 |
0.72 | 0.33 | -0.31 | ||
33 | AT1G31800 | cytochrome P450, family 97, subfamily A, polypeptide 3 | cytochrome P450, family 97, subfamily A, polypeptide 3, LUTEIN DEFICIENT 5 |
0.71 | 0.32 | -0.31 | ||
34 | AT1G73170 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.71 | 0.32 | -0.32 | |||
35 | AT4G31310 | AIG2-like (avirulence induced gene) family protein | 0.7 | 0.32 | -0.31 | |||
36 | AT2G15020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits to 72 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.34 | -0.33 | |||
37 | AT1G07180 | alternative NAD(P)H dehydrogenase 1 | ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, alternative NAD(P)H dehydrogenase 1 |
0.69 | 0.3 | -0.33 | ||
38 | AT1G21065 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). |
0.69 | 0.3 | -0.35 | |||
39 | AT4G28706 | pfkB-like carbohydrate kinase family protein | 0.69 | 0.29 | -0.33 | |||
40 | AT5G57040 | Lactoylglutathione lyase / glyoxalase I family protein | 0.69 | 0.33 | -0.3 | |||
41 | AT2G45990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). |
0.69 | 0.3 | -0.33 | |||
42 | AT3G54500 | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
43 | AT2G25080 | glutathione peroxidase 1 | GLUTATHIONE PEROXIDASE 1, glutathione peroxidase 1 |
0.68 | 0.33 | -0.32 | ||
44 | AT3G01210 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.68 | 0.34 | -0.31 | |||
45 | AT1G52870 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | 0.68 | 0.3 | -0.31 | |||
46 | AT4G05030 | Copper transport protein family | 0.68 | 0.29 | -0.31 | |||
47 | AT5G35970 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.68 | 0.31 | -0.32 | |||
48 | AT3G02830 | zinc finger protein 1 | zinc finger protein 1 | 0.68 | 0.33 | -0.3 | ||
49 | AT2G22540 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 22, SHORT VEGETATIVE PHASE |
0.67 | 0.31 | -0.32 | ||
50 | AT4G28740 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.67 | 0.32 | -0.31 | |||
51 | AT3G13480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.67 | 0.32 | -0.3 | |||
52 | AT1G01060 | Homeodomain-like superfamily protein | LATE ELONGATED HYPOCOTYL, LATE ELONGATED HYPOCOTYL 1 |
0.67 | 0.33 | -0.33 | ||
53 | AT5G16490 | ROP-interactive CRIB motif-containing protein 4 | ROP-interactive CRIB motif-containing protein 4 |
0.67 | 0.32 | -0.33 | ||
54 | AT3G09600 | Homeodomain-like superfamily protein | LHY-CCA1-LIKE5, REVEILLE 8 | 0.67 | 0.3 | -0.31 | ||
55 | AT1G06690 | NAD(P)-linked oxidoreductase superfamily protein | 0.67 | 0.3 | -0.3 | |||
56 | AT3G23400 | Plastid-lipid associated protein PAP / fibrillin family protein |
fibrillin 4 | 0.67 | 0.33 | -0.33 | ||
57 | AT1G52510 | alpha/beta-Hydrolases superfamily protein | 0.67 | 0.31 | -0.32 | |||
58 | AT2G32100 | ovate family protein 16 | RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, ovate family protein 16 |
0.67 | 0.31 | -0.32 | ||
59 | AT5G19850 | alpha/beta-Hydrolases superfamily protein | 0.67 | 0.31 | -0.32 | |||
60 | AT4G13200 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.67 | 0.31 | -0.33 | |||
61 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | -0.64 | 0.31 | -0.32 | ||
62 | AT2G36320 | A20/AN1-like zinc finger family protein | -0.62 | 0.33 | -0.33 | |||
63 | AT4G32220 | transposable element gene | -0.62 | 0.32 | -0.32 | |||
64 | AT2G26510 | Xanthine/uracil permease family protein | pigment defective embryo 135 | -0.61 | 0.31 | -0.33 | ||
65 | AT4G39550 | Galactose oxidase/kelch repeat superfamily protein | -0.59 | 0.3 | -0.32 | |||
66 | AT2G37310 | Pentatricopeptide repeat (PPR) superfamily protein | -0.59 | 0.3 | -0.35 | |||
67 | AT2G07280 | unknown protein; Has 19 Blast hits to 19 proteins in 3 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.33 | |||
68 | AT3G52890 | KCBP-interacting protein kinase | KCBP-interacting protein kinase | -0.58 | 0.31 | -0.33 | ||
69 | AT2G35030 | Pentatricopeptide repeat (PPR) superfamily protein | -0.57 | 0.28 | -0.32 | |||
70 | AT4G33160 | F-box family protein | -0.55 | 0.33 | -0.3 | |||
71 | AT4G27970 | SLAC1 homologue 2 | SLAC1 homologue 2 | -0.55 | 0.29 | -0.32 | ||
72 | AT5G65390 | arabinogalactan protein 7 | arabinogalactan protein 7 | -0.54 | 0.33 | -0.32 | ||
73 | AT2G25640 | SPOC domain / Transcription elongation factor S-II protein | -0.54 | 0.33 | -0.32 | |||
74 | AT5G40840 | Rad21/Rec8-like family protein | Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 |
-0.53 | 0.31 | -0.32 | ||
75 | AT4G19185 | nodulin MtN21 /EamA-like transporter family protein | -0.53 | 0.31 | -0.29 | |||
76 | C0021 | ND:::GC-TOF/MS | 1-Aminocyclopropane-1-carboxylic acid, -, 1-Aminocyclopropane-1-carboxylate |
-0.53 | 0.46 | -0.44 | ||
77 | AT5G42490 | ATP binding microtubule motor family protein | -0.53 | 0.32 | -0.3 | |||
78 | AT3G15970 | NUP50 (Nucleoporin 50 kDa) protein | -0.52 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
79 | C0121 | Isoheptylglucosinolate | - | - | - | -0.73 | 0.42 | -0.44 |