AT5G61370 : -
Query Information
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AGICode AT5G61370
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.32
2 AT1G06380 Ribosomal protein L1p/L10e family 0.8 0.31 -0.33
3 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.8 0.3 -0.33
4 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.79 0.32 -0.29
5 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.31 -0.31
6 AT2G26200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.78 0.31 -0.32
7 AT1G22730 MA3 domain-containing protein 0.77 0.31 -0.31
8 AT2G25970 KH domain-containing protein 0.77 0.32 -0.32
9 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.77 0.32 -0.32
10 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.77 0.34 -0.32
11 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.76 0.31 -0.31
12 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.32 -0.31
13 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.76 0.32 -0.33
14 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.75 0.31 -0.31
15 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.75 0.3 -0.32
16 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.32
17 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.74 0.31 -0.31
18 AT1G53035 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.33 -0.32
19 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 0.73 0.29 -0.33
20 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.73 0.31 -0.33
21 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.73 0.33 -0.32
22 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.31 -0.31
23 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.72 0.32 -0.31
24 AT3G06200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.31 -0.33
25 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.3 -0.32
26 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.31 -0.34
27 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.7 0.32 -0.34
28 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.7 0.3 -0.3
29 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.3 -0.34
30 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.69 0.31 -0.32
31 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 0.69 0.31 -0.3
32 AT2G06170 transposable element gene 0.69 0.3 -0.32
33 AT2G34970 Trimeric LpxA-like enzyme 0.69 0.33 -0.31
34 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.68 0.33 -0.32
35 AT5G17440 LUC7 related protein 0.68 0.3 -0.32
36 AT5G67060 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 HECATE 1 0.68 0.29 -0.32
37 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.32
38 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.31 -0.32
39 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.67 0.32 -0.33
40 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.67 0.35 -0.33
41 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.67 0.33 -0.31
42 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.67 0.32 -0.32
43 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.67 0.31 -0.31
44 AT4G20820 FAD-binding Berberine family protein -0.67 0.32 -0.33
45 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.67 0.32 -0.32
46 AT3G04820 Pseudouridine synthase family protein 0.67 0.3 -0.31
47 AT3G59910 Ankyrin repeat family protein 0.66 0.3 -0.31
48 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 0.66 0.31 -0.31
49 AT5G23880 cleavage and polyadenylation specificity factor 100 CLEAVAGE AND POLYADENYLATION
SPECIFICITY FACTOR 100, cleavage
and polyadenylation specificity
factor 100, EMBRYO DEFECTIVE 1265,
ENHANCED SILENCING PHENOTYPE 5		 0.66 0.29 -0.32
50 AT1G15870 Mitochondrial glycoprotein family protein 0.66 0.35 -0.31
51 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.32 -0.32
52 AT2G22100 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.32 -0.31
53 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.31
54 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.64 0.32 -0.32
55 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.63 0.33 -0.29
56 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.61 0.29 -0.31
57 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.61 0.3 -0.29
58 AT4G19660 NPR1-like protein 4 ATNPR4, NPR1-like protein 4 -0.61 0.3 -0.33
59 AT1G67870 glycine-rich protein -0.6 0.3 -0.33
60 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.6 0.32 -0.31
61 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.6 0.34 -0.31
62 AT1G68440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits
to 86 proteins in 29 species: Archae - 0; Bacteria - 6;
Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 -0.6 0.32 -0.31
63 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.59 0.3 -0.34
64 AT4G27435 Protein of unknown function (DUF1218) -0.59 0.33 -0.31
65 AT3G16280 Integrase-type DNA-binding superfamily protein -0.59 0.3 -0.32
66 AT2G18620 Terpenoid synthases superfamily protein -0.59 0.32 -0.33
67 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.59 0.33 -0.32
68 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.31 -0.34
69 AT1G32840 transposable element gene -0.59 0.31 -0.32
70 AT5G52120 phloem protein 2-A14 phloem protein 2-A14, phloem
protein 2-A14		 -0.58 0.32 -0.31
71 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.58 0.32 -0.31
72 AT1G20823 RING/U-box superfamily protein -0.58 0.31 -0.31
73 AT3G56740 Ubiquitin-associated (UBA) protein -0.57 0.32 -0.32
74 AT5G19430 RING/U-box superfamily protein -0.57 0.34 -0.32
75 AT4G31330 Protein of unknown function, DUF599 -0.57 0.32 -0.31
76 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 -0.57 0.3 -0.3
77 AT5G42910 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.57 0.33 -0.33
78 AT4G09460 myb domain protein 6 myb domain protein 6, myb domain
protein 6		 -0.56 0.34 -0.31
79 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 -0.56 0.29 -0.32
80 AT3G15220 Protein kinase superfamily protein -0.56 0.3 -0.32
81 AT3G53080 D-galactoside/L-rhamnose binding SUEL lectin protein -0.55 0.31 -0.32
82 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.55 0.32 -0.31
83 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.34 -0.32
84 AT4G10360 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.55 0.32 -0.3
85 AT3G12350 F-box family protein -0.55 0.31 -0.34
86 AT1G32920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to wounding; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast
hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.3
87 AT3G55980 salt-inducible zinc finger 1 ATSZF1, salt-inducible zinc finger
1		 -0.54 0.32 -0.32
88 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.54 0.32 -0.33
89 AT3G50750 BES1/BZR1 homolog 1 BES1/BZR1 homolog 1 -0.54 0.31 -0.33
90 AT5G60800 Heavy metal transport/detoxification superfamily protein -0.54 0.33 -0.34