AT5G60980 : -
Query Information
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AGICode AT5G60980
Description Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 1 0.31 -0.33
2 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 0.72 0.34 -0.31
3 AT4G14090 UDP-Glycosyltransferase superfamily protein -0.67 0.31 -0.31
4 AT2G28660 Chloroplast-targeted copper chaperone protein 0.66 0.3 -0.3
5 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.66 0.3 -0.33
6 AT5G42800 dihydroflavonol 4-reductase dihydroflavonol 4-reductase, M318,
TT3		 -0.66 0.3 -0.3
7 AT5G17220 glutathione S-transferase phi 12 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 12, GLUTATHIONE
S-TRANSFERASE 26, glutathione
S-transferase phi 12, TRANSPARENT
TESTA 19		 -0.65 0.31 -0.32
8 AT4G25650 ACD1-like ACD1-like,
PROTOCHLOROPHYLLIDE-DEPENDENT
TRANSLOCON COMPONENT, 52 KDA,
TRANSLOCON AT THE INNER ENVELOPE
MEMBRANE OF CHLOROPLASTS, 55 KDA -
IV		 -0.64 0.3 -0.32
9 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 0.64 0.32 -0.3
10 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.63 0.34 -0.32
11 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.63 0.33 -0.3
12 AT3G62860 alpha/beta-Hydrolases superfamily protein 0.63 0.33 -0.31
13 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 0.61 0.35 -0.31
14 AT2G45280 RAS associated with diabetes protein 51C RAS associated with diabetes
protein 51C, RAS associated with
diabetes protein 51C		 0.6 0.34 -0.3
15 AT5G05880 UDP-Glycosyltransferase superfamily protein 0.6 0.33 -0.31
16 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.6 0.31 -0.34
17 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.59 0.3 -0.34
18 AT5G62230 ERECTA-like 1 ERECTA-like 1 -0.59 0.32 -0.29
19 AT5G59670 Leucine-rich repeat protein kinase family protein -0.59 0.32 -0.33
20 AT5G39130 RmlC-like cupins superfamily protein -0.59 0.34 -0.31
21 AT1G60960 iron regulated transporter 3 IRON REGULATED TRANSPORTER 3, iron
regulated transporter 3		 0.59 0.33 -0.32
22 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.58 0.33 -0.34
23 AT5G03930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03920.1); Has 16 Blast hits
to 16 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.3 -0.28
24 AT2G46600 Calcium-binding EF-hand family protein -0.58 0.31 -0.31
25 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.58 0.33 -0.31
26 AT3G06895 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.3 -0.33
27 AT4G24010 cellulose synthase like G1 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G1, cellulose
synthase like G1		 -0.57 0.3 -0.32
28 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.57 0.33 -0.31
29 AT3G62040 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.57 0.29 -0.33
30 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 -0.57 0.35 -0.3
31 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 -0.57 0.32 -0.32
32 AT2G15810 transposable element gene -0.56 0.31 -0.34
33 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 0.56 0.34 -0.31
34 AT1G19540 NmrA-like negative transcriptional regulator family protein 0.56 0.33 -0.32
35 AT3G09830 Protein kinase superfamily protein -0.56 0.29 -0.3
36 AT4G14130 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan
endotransglucosylase/hydrolase 15,
xyloglucan endotransglycosylase 7		 0.56 0.33 -0.3
37 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.55 0.31 -0.31
38 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 0.55 0.34 -0.31
39 AT3G29590 HXXXD-type acyl-transferase family protein AT5MAT -0.55 0.3 -0.32
40 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.33 -0.31
41 AT5G11930 Thioredoxin superfamily protein -0.54 0.31 -0.33
42 AT3G16490 IQ-domain 26 IQ-domain 26 0.54 0.32 -0.32
43 AT5G57655 xylose isomerase family protein 0.54 0.31 -0.3
44 AT5G64840 general control non-repressible 5 ATP-binding cassette F5, general
control non-repressible 5, general
control non-repressible 5		 -0.54 0.33 -0.31
45 AT2G01720 Ribophorin I 0.54 0.3 -0.31
46 AT5G45890 senescence-associated gene 12 senescence-associated gene 12 -0.53 0.31 -0.31
47 AT3G45640 mitogen-activated protein kinase 3 ATMAPK3, mitogen-activated protein
kinase 3, mitogen-activated
protein kinase 3		 -0.53 0.32 -0.3
48 AT5G26740 Protein of unknown function (DUF300) 0.53 0.3 -0.3
49 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.32 -0.32
50 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 -0.53 0.32 -0.33
51 AT2G40840 disproportionating enzyme 2 disproportionating enzyme 2 -0.52 0.31 -0.32
52 AT4G09820 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH42, TRANSPARENT TESTA 8 -0.51 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - -0.75 0.44 -0.45
54 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) -0.72 0.44 -0.45 C0131
55 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.72 0.48 -0.48
56 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.61 0.46 -0.46
57 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		-0.57 0.31 -0.33 C0232