AT5G61240 : -
Query Information
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AGICode AT5G61240
Description Leucine-rich repeat (LRR) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61240 Leucine-rich repeat (LRR) family protein 1 0.31 -0.32
2 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 0.87 0.33 -0.33
3 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.84 0.3 -0.33
4 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.84 0.32 -0.32
5 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 0.84 0.32 -0.33
6 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein 0.83 0.3 -0.33
7 AT2G20760 Clathrin light chain protein 0.83 0.32 -0.31
8 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 0.82 0.33 -0.3
9 AT4G31340 myosin heavy chain-related 0.82 0.33 -0.32
10 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 0.81 0.31 -0.32
11 AT1G27970 nuclear transport factor 2B nuclear transport factor 2B 0.81 0.32 -0.32
12 AT4G39880 Ribosomal protein L23/L15e family protein 0.81 0.35 -0.33
13 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.31 -0.33
14 AT5G50850 Transketolase family protein MACCI-BOU 0.81 0.31 -0.34
15 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 0.8 0.33 -0.31
16 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 0.8 0.32 -0.31
17 AT2G27020 20S proteasome alpha subunit G1 20S proteasome alpha subunit G1 0.8 0.29 -0.31
18 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 0.8 0.31 -0.31
19 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 0.8 0.35 -0.33
20 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI 0.8 0.32 -0.31
21 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.8 0.32 -0.31
22 AT5G03030 Chaperone DnaJ-domain superfamily protein 0.79 0.3 -0.3
23 AT4G22930 pyrimidin 4 DIHYDROOROTASE, pyrimidin 4 0.79 0.3 -0.31
24 AT1G18670 Protein kinase superfamily protein IMPAIRED IN BABA-INDUCED STERILITY
1		 -0.79 0.3 -0.32
25 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.78 0.34 -0.32
26 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.78 0.31 -0.31
27 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3		 0.78 0.32 -0.34
28 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 0.78 0.32 -0.33
29 AT1G74340 dolichol phosphate-mannose biosynthesis regulatory
protein-related		 dolichol phosphate mannose
synthase 2		 0.78 0.34 -0.31
30 AT3G42050 vacuolar ATP synthase subunit H family protein 0.78 0.31 -0.33
31 AT1G29150 non-ATPase subunit 9 non-ATPase subunit 9, REGULATORY
PARTICLE NON-ATPASE 6		 0.78 0.3 -0.31
32 AT4G11150 vacuolar ATP synthase subunit E1 embryo defective 2448, vacuolar
ATP synthase subunit E1, TUFF,
VHA-E1		 0.78 0.32 -0.33
33 AT5G45550 Mob1/phocein family protein MOB1-like 0.77 0.33 -0.33
34 AT2G40730 Protein kinase family protein with ARM repeat domain cytoplasmic tRNA export protein 0.77 0.31 -0.3
35 AT1G11890 Synaptobrevin family protein SECRETION 22, SECRETION 22 0.77 0.3 -0.3
36 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.77 0.33 -0.34
37 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein 0.77 0.32 -0.32
38 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 0.77 0.31 -0.31
39 AT1G56330 secretion-associated RAS 1B SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B,
ARABIDOPSIS THALIANA
SECRETION-ASSOCIATED RAS 1B,
SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B		 0.77 0.31 -0.32
40 AT2G27600 AAA-type ATPase family protein ATSKD1, SUPPRESSOR OF K+ TRANSPORT
GROWTH DEFECT1, VACUOLAR PROTEIN
SORTING 4		 0.77 0.29 -0.29
41 AT1G54220 Dihydrolipoamide acetyltransferase, long form protein 0.77 0.33 -0.3
42 AT5G58060 SNARE-like superfamily protein ATGP1, ATYKT61, YKT61 0.77 0.29 -0.3
43 AT1G80500 SNARE-like superfamily protein 0.76 0.3 -0.34
44 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.76 0.31 -0.33
45 AT4G38510 ATPase, V1 complex, subunit B protein 0.76 0.3 -0.31
46 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.76 0.31 -0.32
47 AT1G67250 Proteasome maturation factor UMP1 0.76 0.32 -0.31
48 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 0.76 0.31 -0.31
49 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.76 0.32 -0.34
50 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 0.75 0.31 -0.31
51 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0.75 0.31 -0.32
52 AT5G23540 Mov34/MPN/PAD-1 family protein 0.75 0.33 -0.33
53 AT4G12590 Protein of unknown function DUF106, transmembrane 0.75 0.32 -0.32
54 AT1G08510 fatty acyl-ACP thioesterases B fatty acyl-ACP thioesterases B 0.75 0.31 -0.31
55 AT5G56350 Pyruvate kinase family protein 0.75 0.3 -0.34
56 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.75 0.31 -0.33
57 AT1G64380 Integrase-type DNA-binding superfamily protein -0.75 0.3 -0.32
58 AT1G79340 metacaspase 4 metacaspase 4, metacaspase 2d,
metacaspase 4, metacaspase 2d		 0.75 0.33 -0.33
59 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.75 0.33 -0.31
60 AT1G29310 SecY protein transport family protein 0.75 0.3 -0.34
61 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 0.75 0.32 -0.32
62 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.74 0.34 -0.3
63 AT1G28510 Optic atrophy 3 protein (OPA3) 0.74 0.31 -0.32
64 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 0.74 0.31 -0.3
65 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.74 0.3 -0.34
66 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.74 0.3 -0.3
67 AT5G18520 Lung seven transmembrane receptor family protein 0.74 0.31 -0.31
68 AT4G24820 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 0.74 0.32 -0.33
69 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.74 0.31 -0.34
70 AT1G22300 general regulatory factor 10 14-3-3 PROTEIN G-BOX FACTOR14
EPSILON, GF14 EPSILON, general
regulatory factor 10		 0.74 0.32 -0.31
71 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.33 -0.3
72 AT1G30630 Coatomer epsilon subunit 0.73 0.33 -0.33
73 AT1G15860 Domain of unknown function (DUF298) 0.73 0.32 -0.33
74 AT2G34585 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 43 Blast hits to 43
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.73 0.31 -0.32
75 AT5G20500 Glutaredoxin family protein 0.73 0.31 -0.32
76 AT4G37830 cytochrome c oxidase-related 0.73 0.31 -0.32
77 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.73 0.3 -0.33
78 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.73 0.32 -0.32
79 AT5G54750 Transport protein particle (TRAPP) component 0.73 0.3 -0.3
80 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.73 0.32 -0.3
81 AT4G31080 Protein of unknown function (DUF2296) 0.73 0.31 -0.32
82 AT3G24160 putative type 1 membrane protein putative type 1 membrane protein 0.72 0.31 -0.31
83 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 0.72 0.31 -0.31
84 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.72 0.3 -0.33
85 AT4G14160 Sec23/Sec24 protein transport family protein 0.72 0.32 -0.31
86 AT5G05820 Nucleotide-sugar transporter family protein 0.72 0.33 -0.32
87 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.72 0.31 -0.34
88 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.72 0.3 -0.31
89 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.72 0.32 -0.34
90 AT2G44050 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase /
lumazine synthase / riboflavin synthase		 COI1 SUPPRESSOR1, coronatine
insensitive1 suppressor		 0.72 0.3 -0.31
91 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.72 0.32 -0.33
92 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 -0.7 0.33 -0.33
93 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 -0.69 0.34 -0.33
94 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 -0.69 0.31 -0.32
95 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.69 0.33 -0.31
96 AT2G31980 PHYTOCYSTATIN 2 PHYTOCYSTATIN 2, PHYTOCYSTATIN 2 -0.68 0.32 -0.3
97 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 -0.67 0.33 -0.3
98 AT4G25880 pumilio 6 pumilio 6, pumilio 6 -0.67 0.32 -0.33
99 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.66 0.34 -0.33
100 AT3G62090 phytochrome interacting factor 3-like 2 PHYTOCHROME-INTERACTING FACTOR 6,
phytochrome interacting factor
3-like 2		 -0.66 0.31 -0.31
101 AT5G52390 PAR1 protein -0.66 0.32 -0.32
102 AT1G69910 Protein kinase superfamily protein -0.65 0.3 -0.29
103 AT3G28590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to
1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.32 -0.3
104 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.65 0.33 -0.31
105 AT1G53070 Legume lectin family protein -0.65 0.3 -0.35
106 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.65 0.33 -0.32
107 AT1G51170 Protein kinase superfamily protein -0.65 0.33 -0.31
108 AT3G26480 Transducin family protein / WD-40 repeat family protein -0.64 0.33 -0.31
109 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.28
110 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.63 0.3 -0.31
111 AT2G24240 BTB/POZ domain with WD40/YVTN repeat-like protein -0.63 0.33 -0.32
112 AT1G14480 Ankyrin repeat family protein -0.63 0.31 -0.31
113 AT2G06410 transposable element gene -0.63 0.29 -0.33
114 AT4G04630 Protein of unknown function, DUF584 -0.62 0.33 -0.31
115 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.62 0.29 -0.32
116 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.3
117 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 -0.6 0.32 -0.32
118 AT5G18930 Adenosylmethionine decarboxylase family protein BUSHY AND DWARF 2, SAMDC4 -0.6 0.31 -0.31
119 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.6 0.32 -0.32
120 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
121 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 -0.59 0.31 -0.3
122 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.59 0.3 -0.3
123 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.58 0.32 -0.31
124 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.57 0.31 -0.34
125 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.56 0.3 -0.31
126 AT3G23160 Protein of unknown function (DUF668) -0.56 0.31 -0.32
127 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.56 0.32 -0.31
128 AT4G03700 transposable element gene -0.56 0.34 -0.32
129 AT3G02310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 4, SEPALLATA 2 -0.56 0.32 -0.3
130 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.33 -0.32
131 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.82 0.39 -0.42 C0263