AT5G61220 : -
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AGICode AT5G61220
Description LYR family of Fe/S cluster biogenesis protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61220 LYR family of Fe/S cluster biogenesis protein 1 0.3 -0.32
2 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.87 0.31 -0.31
3 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.85 0.31 -0.31
4 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).
0.84 0.31 -0.31
5 AT3G22845 emp24/gp25L/p24 family/GOLD family protein 0.84 0.32 -0.33
6 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
0.83 0.32 -0.31
7 AT5G05370 Cytochrome b-c1 complex, subunit 8 protein 0.83 0.3 -0.3
8 AT3G52390 TatD related DNase 0.82 0.28 -0.3
9 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
succinate dehydrogenase 7,
succinate dehydrogenase 7B
0.82 0.3 -0.31
10 AT1G22840 CYTOCHROME C-1 CYTOCHROME C-A, CYTOCHROME C-1 0.82 0.3 -0.35
11 AT2G18040 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 peptidylprolyl cis/trans
isomerase, NIMA-interacting 1
0.82 0.32 -0.32
12 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB 0.82 0.31 -0.35
13 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.82 0.31 -0.33
14 AT3G46430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.81 0.31 -0.32
15 AT1G74240 Mitochondrial substrate carrier family protein 0.81 0.32 -0.33
16 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.81 0.28 -0.3
17 AT1G21900 emp24/gp25L/p24 family/GOLD family protein 0.8 0.32 -0.32
18 AT2G30330 GCN5L1 family protein BLOC subunit 1 0.8 0.32 -0.3
19 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase
0.8 0.3 -0.33
20 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein
0.8 0.34 -0.33
21 AT5G08300 Succinyl-CoA ligase, alpha subunit 0.8 0.31 -0.32
22 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein
0.8 0.31 -0.32
23 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).
-0.79 0.3 -0.32
24 AT2G34160 Alba DNA/RNA-binding protein 0.79 0.32 -0.31
25 AT1G67250 Proteasome maturation factor UMP1 0.79 0.32 -0.31
26 AT3G62810 complex 1 family protein / LVR family protein 0.79 0.29 -0.31
27 AT3G48140 B12D protein 0.79 0.31 -0.31
28 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 0.79 0.32 -0.3
29 AT1G51650 ATP synthase epsilon chain, mitochondrial 0.78 0.31 -0.32
30 AT3G03420 Ku70-binding family protein 0.78 0.31 -0.32
31 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.78 0.32 -0.31
32 AT1G14450 NADH dehydrogenase (ubiquinone)s 0.78 0.3 -0.34
33 AT2G40765 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.78 0.32 -0.31
34 AT2G47690 NADH-ubiquinone oxidoreductase-related 0.78 0.31 -0.33
35 AT4G32470 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0.78 0.31 -0.31
36 AT5G64350 FK506-binding protein 12 ARABIDOPSIS THALIANA FK506-BINDING
PROTEIN 12, FK506-binding protein
12, FKP12
0.77 0.34 -0.32
37 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).
0.77 0.32 -0.32
38 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein 0.77 0.33 -0.32
39 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11
0.77 0.31 -0.32
40 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2
0.77 0.34 -0.3
41 AT3G58180 ARM repeat superfamily protein 0.77 0.33 -0.33
42 AT3G62790 NADH-ubiquinone oxidoreductase-related 0.76 0.31 -0.3
43 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.76 0.34 -0.31
44 AT4G26410 Uncharacterised conserved protein UCP022280 0.76 0.32 -0.32
45 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.76 0.31 -0.3
46 AT5G18800 Cox19-like CHCH family protein 0.76 0.3 -0.3
47 AT3G12630 A20/AN1-like zinc finger family protein stress associated protein 5 0.76 0.32 -0.29
48 AT3G01280 voltage dependent anion channel 1 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 1, voltage
dependent anion channel 1
0.76 0.32 -0.3
49 AT3G20920 translocation protein-related 0.75 0.32 -0.3
50 AT3G62400 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.75 0.31 -0.32
51 AT3G25670 Leucine-rich repeat (LRR) family protein -0.75 0.3 -0.31
52 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 0.75 0.29 -0.31
53 AT4G16210 enoyl-CoA hydratase/isomerase A ENOYL-COA HYDRATASE 2, enoyl-CoA
hydratase/isomerase A
0.75 0.31 -0.31
54 AT2G22425 Microsomal signal peptidase 12 kDa subunit (SPC12) 0.75 0.3 -0.31
55 AT4G34700 LYR family of Fe/S cluster biogenesis protein AtCIB22, B22 subunit of eukaryotic
mitochondrial Complex I
0.75 0.31 -0.3
56 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7
0.75 0.31 -0.31
57 AT1G48850 chorismate synthase, putative /
5-enolpyruvylshikimate-3-phosphate phospholyase, putative
embryo defective 1144 0.75 0.31 -0.33
58 AT5G52280 Myosin heavy chain-related protein -0.75 0.3 -0.32
59 AT1G69680 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein
0.75 0.3 -0.31
60 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2
-0.75 0.32 -0.31
61 AT5G50460 secE/sec61-gamma protein transport protein 0.75 0.3 -0.33
62 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 0.74 0.3 -0.33
63 AT4G30996 Protein of unknown function (DUF1068) NA(+)- AND K(+)-SENSITIVE 1 0.74 0.3 -0.34
64 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.74 0.3 -0.3
65 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 0.74 0.31 -0.33
66 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
0.74 0.31 -0.33
67 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1
0.74 0.3 -0.29
68 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein
0.74 0.33 -0.31
69 AT4G38920 vacuolar-type H(+)-ATPase C3 vacuolar-type H(+)-ATPase C3,
AVA-P3, vacuolar-type H(+)-ATPase
C3
0.74 0.31 -0.33
70 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
0.74 0.3 -0.3
71 AT5G11260 Basic-leucine zipper (bZIP) transcription factor family
protein
ELONGATED HYPOCOTYL 5, REVERSAL OF
THE DET PHENOTYPE 5
0.74 0.29 -0.31
72 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).
0.74 0.31 -0.3
73 AT4G14420 HR-like lesion-inducing protein-related 0.74 0.31 -0.35
74 AT1G75820 Leucine-rich receptor-like protein kinase family protein ATCLV1, CLAVATA 1, FASCIATA 3,
FLOWER DEVELOPMENT 5
-0.74 0.33 -0.31
75 AT3G19300 Protein kinase superfamily protein -0.74 0.32 -0.29
76 AT3G62450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 35 Blast hits to 35
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).
0.74 0.32 -0.32
77 AT5G63700 zinc ion binding;DNA binding -0.74 0.29 -0.32
78 AT3G47833 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits
to 42 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
succinate dehydrogenase 7,
succinate dehydrogenase 7A
0.73 0.32 -0.32
79 AT1G75330 ornithine carbamoyltransferase ornithine carbamoyltransferase 0.73 0.3 -0.33
80 AT2G02510 NADH dehydrogenase (ubiquinone)s 0.73 0.33 -0.3
81 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.73 0.34 -0.31
82 AT5G53310 myosin heavy chain-related 0.73 0.29 -0.32
83 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A
0.73 0.31 -0.31
84 AT2G44065 Ribosomal protein L2 family 0.73 0.32 -0.33
85 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein
ATOEP16-3, OEP16-3 0.73 0.33 -0.31
86 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1
-0.73 0.32 -0.33
87 AT1G73570 HCP-like superfamily protein -0.73 0.31 -0.32
88 AT5G13070 MSF1-like family protein 0.73 0.3 -0.33
89 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP
-0.73 0.32 -0.31
90 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein
0.73 0.31 -0.33
91 AT2G29530 Tim10/DDP family zinc finger protein TIM10 0.72 0.32 -0.33
92 AT5G17560 BolA-like family protein 0.72 0.31 -0.31
93 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative 0.72 0.31 -0.3
94 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.72 0.34 -0.31
95 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).
0.72 0.3 -0.31
96 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 0.72 0.32 -0.33
97 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.72 0.3 -0.32
98 AT2G20820 unknown protein; Has 44 Blast hits to 44 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.72 0.31 -0.31
99 AT3G05230 Signal peptidase subunit 0.72 0.3 -0.32
100 AT2G46505 succinate dehydrogenase subunit 4 succinate dehydrogenase subunit 4 0.72 0.3 -0.31
101 AT4G15800 ralf-like 33 ralf-like 33 0.72 0.3 -0.31
102 AT2G46380 Protein of unknown function (DUF3133) -0.71 0.3 -0.31
103 AT5G26850 Uncharacterized protein -0.7 0.34 -0.31
104 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
SILENCING DEFECTIVE -0.7 0.31 -0.31
105 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B
-0.69 0.3 -0.33
106 AT5G51350 Leucine-rich repeat transmembrane protein kinase family
protein
MORE LATERAL GROWTH1 -0.69 0.31 -0.3
107 AT3G30300 O-fucosyltransferase family protein -0.67 0.31 -0.3
108 AT1G02110 Protein of unknown function (DUF630 and DUF632) -0.67 0.32 -0.31
109 AT4G14150 phragmoplast-associated kinesin-related protein 1 KINESIN-12A,
phragmoplast-associated
kinesin-related protein 1
-0.65 0.31 -0.3
110 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.65 0.33 -0.34
111 AT1G70550 Protein of Unknown Function (DUF239) -0.64 0.32 -0.32
112 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.64 0.3 -0.31
113 AT1G29240 Protein of unknown function (DUF688) -0.64 0.33 -0.32
114 AT3G49880 glycosyl hydrolase family protein 43 -0.63 0.31 -0.31
115 AT3G20150 Kinesin motor family protein -0.63 0.32 -0.32
116 AT1G77580 Plant protein of unknown function (DUF869) -0.63 0.33 -0.31
117 AT5G44180 Homeodomain-like transcriptional regulator -0.62 0.31 -0.3
118 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.62 0.32 -0.31
119 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80
-0.62 0.33 -0.32
120 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
-0.62 0.31 -0.31
121 AT2G33440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.32 -0.32
122 AT2G04850 Auxin-responsive family protein -0.61 0.31 -0.32
123 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.61 0.29 -0.32
124 AT4G18780 cellulose synthase family protein CELLULOSE SYNTHASE 8, CELLULOSE
SYNTHASE 8, IRREGULAR XYLEM 1,
LEAF WILTING 2
-0.61 0.33 -0.32
125 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 -0.61 0.31 -0.32
126 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 -0.61 0.3 -0.32
127 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein
-0.6 0.33 -0.34
128 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
ATRX, CHR20 -0.6 0.31 -0.32
129 AT4G14760 kinase interacting (KIP1-like) family protein -0.6 0.28 -0.32
130 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10
-0.59 0.3 -0.3
131 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2
-0.59 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.8 0.44 -0.43 C0266
133 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III
-0.74 0.45 -0.45 C0063