AT5G61030 : glycine-rich RNA-binding protein 3
Query Information
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AGICode AT5G61030
Description glycine-rich RNA-binding protein 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 1 0.3 -0.32
2 AT1G23100 GroES-like family protein 0.86 0.33 -0.3
3 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 0.83 0.3 -0.31
4 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.83 0.29 -0.31
5 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 0.82 0.29 -0.29
6 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 0.81 0.33 -0.3
7 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.32 -0.31
8 AT5G02050 Mitochondrial glycoprotein family protein 0.81 0.31 -0.31
9 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.32 -0.32
10 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.32 -0.32
11 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.31 -0.31
12 AT1G30960 GTP-binding family protein 0.8 0.3 -0.33
13 AT5G22790 reticulata-related 1 reticulata-related 1 0.8 0.31 -0.33
14 AT3G13940 DNA binding;DNA-directed RNA polymerases 0.78 0.32 -0.33
15 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.78 0.32 -0.34
16 AT2G39795 Mitochondrial glycoprotein family protein 0.77 0.33 -0.32
17 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.77 0.31 -0.29
18 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.77 0.31 -0.31
19 AT3G49320 Metal-dependent protein hydrolase 0.77 0.31 -0.31
20 AT2G34357 ARM repeat superfamily protein 0.77 0.34 -0.32
21 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.76 0.33 -0.31
22 AT5G16930 AAA-type ATPase family protein 0.76 0.31 -0.31
23 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 0.76 0.31 -0.29
24 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.76 0.3 -0.35
25 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.76 0.31 -0.31
26 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.31
27 AT1G72730 DEA(D/H)-box RNA helicase family protein 0.76 0.31 -0.31
28 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 0.75 0.32 -0.29
29 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 0.75 0.3 -0.33
30 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.33 -0.3
31 AT3G15000 cobalt ion binding 0.75 0.32 -0.31
32 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.75 0.32 -0.31
33 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.74 0.32 -0.33
34 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 0.74 0.31 -0.32
35 AT4G29890 choline monooxygenase, putative (CMO-like) -0.74 0.31 -0.32
36 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 0.74 0.32 -0.32
37 AT4G02930 GTP binding Elongation factor Tu family protein 0.74 0.31 -0.34
38 AT5G14580 polyribonucleotide nucleotidyltransferase, putative 0.73 0.31 -0.29
39 AT5G50315 transposable element gene 0.73 0.31 -0.31
40 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.73 0.32 -0.3
41 AT3G01800 Ribosome recycling factor 0.73 0.33 -0.3
42 AT5G59240 Ribosomal protein S8e family protein 0.73 0.31 -0.36
43 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.73 0.34 -0.32
44 AT1G79470 Aldolase-type TIM barrel family protein 0.73 0.32 -0.31
45 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 0.73 0.31 -0.33
46 AT5G12220 las1-like family protein 0.72 0.32 -0.31
47 AT1G07970 CONTAINS InterPro DOMAIN/s: Cytochrome B561-related,
N-terminal (InterPro:IPR019176); Has 215 Blast hits to 213
proteins in 79 species: Archae - 0; Bacteria - 6; Metazoa -
131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes
- 14 (source: NCBI BLink).		 0.72 0.33 -0.31
48 AT5G12410 THUMP domain-containing protein 0.72 0.29 -0.31
49 AT5G03230 Protein of unknown function, DUF584 -0.72 0.32 -0.34
50 AT3G19440 Pseudouridine synthase family protein 0.72 0.3 -0.3
51 AT1G62730 Terpenoid synthases superfamily protein 0.72 0.32 -0.3
52 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.72 0.29 -0.31
53 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.72 0.29 -0.31
54 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 0.71 0.33 -0.31
55 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.3 -0.31
56 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.71 0.3 -0.34
57 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.33
58 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 0.71 0.32 -0.31
59 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 0.7 0.32 -0.32
60 AT1G32360 Zinc finger (CCCH-type) family protein -0.7 0.32 -0.34
61 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.3 -0.29
62 AT4G34360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.32 -0.32
63 AT5G65390 arabinogalactan protein 7 arabinogalactan protein 7 0.69 0.32 -0.32
64 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.69 0.33 -0.3
65 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.32 -0.31
66 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 -0.67 0.32 -0.31
67 AT2G38820 Protein of unknown function (DUF506) -0.67 0.33 -0.29
68 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 -0.67 0.33 -0.33
69 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 -0.67 0.3 -0.34
70 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 -0.67 0.3 -0.32
71 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.33 -0.33
72 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 -0.67 0.3 -0.33
73 AT2G18670 RING/U-box superfamily protein -0.67 0.32 -0.34
74 AT4G15475 F-box/RNI-like superfamily protein -0.67 0.32 -0.33
75 AT1G22540 Major facilitator superfamily protein -0.66 0.32 -0.31
76 AT5G24000 Protein of unknown function (DUF819) -0.66 0.33 -0.31
77 AT1G49180 protein kinase family protein -0.66 0.31 -0.3
78 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 -0.66 0.31 -0.33
79 AT4G27670 heat shock protein 21 heat shock protein 21 -0.66 0.34 -0.33
80 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.66 0.34 -0.32
81 AT1G32160 Protein of unknown function (DUF760) -0.65 0.32 -0.3
82 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.65 0.33 -0.32
83 AT5G52420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.29 -0.34
84 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.65 0.32 -0.33
85 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.65 0.32 -0.32
86 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 -0.65 0.32 -0.31
87 AT1G67080 abscisic acid (aba)-deficient 4 abscisic acid (ABA)-deficient 4 -0.64 0.32 -0.31
88 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.64 0.31 -0.32
89 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.64 0.28 -0.31
90 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.33 -0.31
91 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.64 0.32 -0.32
92 AT1G72650 TRF-like 6 TRF-like 6 -0.64 0.32 -0.32
93 AT3G27660 oleosin 4 OLEOSIN 3, oleosin 4 -0.63 0.31 -0.32
94 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 -0.63 0.29 -0.34
95 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.63 0.3 -0.32
96 AT4G33500 Protein phosphatase 2C family protein -0.62 0.31 -0.32
97 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.32 -0.29
98 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.62 0.34 -0.3
99 AT4G31270 sequence-specific DNA binding transcription factors -0.62 0.33 -0.31
100 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.31
101 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.62 0.33 -0.3
102 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.32 -0.33
103 AT5G45160 Root hair defective 3 GTP-binding protein (RHD3) -0.61 0.3 -0.3
104 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.61 0.31 -0.32
105 AT4G01510 Arv1-like protein ARV2 -0.61 0.3 -0.33
106 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.6 0.31 -0.32
107 AT3G47000 Glycosyl hydrolase family protein -0.6 0.31 -0.32
108 AT4G10020 hydroxysteroid dehydrogenase 5 hydroxysteroid dehydrogenase 5,
hydroxysteroid dehydrogenase 5		 -0.6 0.34 -0.3
109 AT3G42630 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.32 -0.31
110 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.31 -0.31
111 AT3G57470 Insulinase (Peptidase family M16) family protein -0.59 0.31 -0.31
112 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.59 0.32 -0.33
113 AT4G20030 RNA-binding (RRM/RBD/RNP motifs) family protein -0.59 0.31 -0.32
114 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.33 -0.32
115 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.59 0.31 -0.31
116 AT5G40960 Protein of unknown function (DUF 3339) -0.59 0.31 -0.34