AT5G60170 : -
Query Information
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AGICode AT5G60170
Description RNA binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 1 0.3 -0.31
2 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.75 0.33 -0.32
3 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.72 0.28 -0.3
4 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 0.7 0.3 -0.32
5 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.7 0.31 -0.32
6 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 -0.7 0.33 -0.34
7 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 -0.69 0.32 -0.3
8 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 0.67 0.33 -0.32
9 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.67 0.3 -0.31
10 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.67 0.31 -0.35
11 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.66 0.3 -0.32
12 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.65 0.32 -0.32
13 AT3G19960 myosin 1 myosin 1 0.65 0.32 -0.29
14 AT4G14600 Target SNARE coiled-coil domain protein -0.64 0.31 -0.31
15 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.64 0.31 -0.32
16 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 0.64 0.32 -0.31
17 AT5G58870 FTSH protease 9 FTSH protease 9 0.64 0.31 -0.31
18 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.64 0.33 -0.31
19 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.64 0.31 -0.31
20 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.29 -0.31
21 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.64 0.3 -0.31
22 AT5G50375 cyclopropyl isomerase cyclopropyl isomerase -0.63 0.31 -0.3
23 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 0.63 0.31 -0.31
24 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.63 0.31 -0.33
25 AT3G06090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower, leaf, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, LP.08 eight leaves visible, E expanded cotyledon
stage; Has 7 Blast hits to 7 proteins in 2 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.33
26 AT5G24740 Protein of unknown function (DUF1162) 0.63 0.31 -0.31
27 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.32 -0.34
28 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 0.63 0.31 -0.31
29 AT3G13225 WW domain-containing protein 0.63 0.31 -0.31
30 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.32
31 AT5G09880 Splicing factor, CC1-like 0.63 0.32 -0.31
32 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.62 0.29 -0.33
33 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 0.62 0.3 -0.32
34 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.62 0.29 -0.31
35 AT5G20840 Phosphoinositide phosphatase family protein 0.62 0.3 -0.32
36 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.62 0.31 -0.33
37 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 0.62 0.3 -0.31
38 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.61 0.33 -0.28
39 AT3G11670 UDP-Glycosyltransferase superfamily protein DIGALACTOSYL DIACYLGLYCEROL
DEFICIENT 1		 0.61 0.31 -0.3
40 AT3G47530 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.32 -0.31
41 AT1G63430 Leucine-rich repeat protein kinase family protein 0.61 0.33 -0.33
42 AT1G73660 protein tyrosine kinase family protein 0.61 0.31 -0.28
43 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.3
44 AT3G14075 Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 0.61 0.31 -0.29
45 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein 0.61 0.35 -0.29
46 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.33 -0.32
47 AT2G22540 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 22, SHORT VEGETATIVE
PHASE		 0.6 0.32 -0.3
48 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.6 0.32 -0.3
49 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.6 0.31 -0.3
50 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.6 0.33 -0.31
51 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.6 0.31 -0.3
52 AT1G56680 Chitinase family protein -0.6 0.32 -0.33
53 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.32 -0.31
54 AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein CRM3, HIGH CHLOROPHYLL
FLUORESCENCE 152		 0.6 0.31 -0.32
55 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.6 0.31 -0.33
56 AT3G19670 pre-mRNA-processing protein 40B pre-mRNA-processing protein 40B,
pre-mRNA-processing protein 40B		 0.59 0.31 -0.32
57 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.59 0.34 -0.32
58 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.59 0.31 -0.31
59 AT1G54850 HSP20-like chaperones superfamily protein -0.59 0.31 -0.3
60 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.59 0.34 -0.31
61 AT2G18760 chromatin remodeling 8 chromatin remodeling 8 0.59 0.32 -0.32
62 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.59 0.32 -0.31
63 AT3G55080 SET domain-containing protein 0.59 0.33 -0.3
64 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.59 0.31 -0.3
65 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.59 0.35 -0.3
66 AT5G07040 RING/U-box superfamily protein -0.58 0.29 -0.33
67 AT2G37120 S1FA-like DNA-binding protein -0.58 0.32 -0.29
68 AT4G31320 SAUR-like auxin-responsive protein family -0.58 0.31 -0.3
69 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.58 0.31 -0.31
70 AT5G20170 RNA polymerase II transcription mediators 0.58 0.31 -0.32
71 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.3 -0.34
72 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.57 0.32 -0.31
73 AT5G63320 nuclear protein X1 nuclear protein X1 0.57 0.3 -0.31
74 AT5G40090 Disease resistance protein (TIR-NBS class) -0.57 0.34 -0.34
75 AT3G45710 Major facilitator superfamily protein -0.57 0.32 -0.32
76 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.57 0.32 -0.31
77 AT4G24150 growth-regulating factor 8 growth-regulating factor 8,
growth-regulating factor 8		 0.57 0.31 -0.3
78 AT3G61390 RING/U-box superfamily protein 0.57 0.33 -0.33
79 AT2G35000 RING/U-box superfamily protein Arabidopsis toxicos en levadura 9 -0.57 0.32 -0.33
80 AT4G37320 cytochrome P450, family 81, subfamily D, polypeptide 5 cytochrome P450, family 81,
subfamily D, polypeptide 5		 0.57 0.3 -0.3
81 AT1G43580 Sphingomyelin synthetase family protein -0.57 0.3 -0.32
82 AT5G18550 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.57 0.32 -0.3
83 AT1G69820 gamma-glutamyl transpeptidase 3 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.56 0.31 -0.32
84 AT3G07900 O-fucosyltransferase family protein -0.56 0.31 -0.31
85 AT3G63470 serine carboxypeptidase-like 40 serine carboxypeptidase-like 40 -0.56 0.31 -0.31
86 AT1G63670 Protein of unknown function (DUF3741) 0.56 0.32 -0.31
87 AT1G30130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1365
(InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins
in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0;
Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920
(source: NCBI BLink).		 -0.56 0.3 -0.31
88 AT1G70850 MLP-like protein 34 MLP-like protein 34 -0.56 0.31 -0.34
89 AT1G21610 wound-responsive family protein 0.56 0.33 -0.32
90 AT5G04470 cyclin-dependent protein kinase inhibitors SIAMESE -0.56 0.31 -0.31
91 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.56 0.33 -0.32
92 AT3G14800 transposable element gene 0.56 0.31 -0.31
93 AT5G61340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.32
94 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.56 0.3 -0.33
95 AT1G11080 serine carboxypeptidase-like 31 serine carboxypeptidase-like 31 -0.56 0.3 -0.31
96 AT5G38310 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.33 -0.29
97 AT5G02740 Ribosomal protein S24e family protein -0.56 0.31 -0.3
98 AT1G30820 CTP synthase family protein -0.55 0.35 -0.32
99 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 -0.55 0.3 -0.34
100 AT5G15890 TRICHOME BIREFRINGENCE-LIKE 21 TRICHOME BIREFRINGENCE-LIKE 21 -0.55 0.3 -0.33
101 AT3G09470 Major facilitator superfamily protein -0.55 0.35 -0.31
102 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 -0.55 0.33 -0.31
103 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 -0.54 0.3 -0.31
104 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 -0.54 0.31 -0.3
105 AT5G48230 acetoacetyl-CoA thiolase 2 acetoacetyl-CoA thiolase 2, EMBRYO
DEFECTIVE 1276		 -0.53 0.33 -0.3
106 AT2G23540 GDSL-like Lipase/Acylhydrolase superfamily protein -0.53 0.31 -0.29
107 AT3G50300 HXXXD-type acyl-transferase family protein -0.53 0.32 -0.3
108 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.53 0.34 -0.3
109 AT1G45130 beta-galactosidase 5 beta-galactosidase 5 -0.52 0.33 -0.31
110 AT4G20140 Leucine-rich repeat transmembrane protein kinase GASSHO1 -0.52 0.34 -0.31
111 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.52 0.29 -0.32
112 AT3G47400 Plant invertase/pectin methylesterase inhibitor superfamily -0.52 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0177 MST_2429.6 - - - 0.69 0.47 -0.43
114 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis 0.68 0.45 -0.46 C0193