AT5G59860 : -
Query Information
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AGICode AT5G59860
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G59860 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.31
2 AT1G36430 transposable element gene -0.72 0.32 -0.32
3 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.71 0.31 -0.31
4 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.69 0.31 -0.31
5 AT5G63905 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.31 -0.32
6 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.67 0.32 -0.3
7 AT5G15581 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: leaf apex; Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.31 -0.32
8 AT5G11130 Exostosin family protein 0.65 0.32 -0.33
9 AT1G75550 glycine-rich protein 0.63 0.31 -0.34
10 AT3G58740 citrate synthase 1 citrate synthase 1 0.63 0.3 -0.29
11 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.61 0.31 -0.32
12 AT3G32940 RNA-binding KH domain-containing protein 0.61 0.33 -0.33
13 AT3G53060 SKP1-like 6 SKP1-like 6, SKP1-like 6 -0.61 0.31 -0.35
14 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.6 0.31 -0.3
15 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A
subunit protein		 0.59 0.33 -0.33
16 AT4G21370 S-locus protein kinase, putative pseudogene of S-locus receptor
kinase a		 -0.59 0.31 -0.3
17 AT1G31380 TRAF-like family protein -0.59 0.32 -0.31
18 AT2G43160 ENTH/VHS family protein 0.59 0.3 -0.29
19 AT5G67010 Integrase-type DNA-binding superfamily protein -0.59 0.33 -0.3
20 AT4G36140 disease resistance protein (TIR-NBS-LRR class), putative 0.58 0.31 -0.34
21 AT1G73860 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.3 -0.31
22 AT5G03970 F-box associated ubiquitination effector family protein -0.57 0.33 -0.3
23 AT5G47790 SMAD/FHA domain-containing protein -0.57 0.32 -0.32
24 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein 0.57 0.31 -0.29
25 AT3G33080 transposable element gene -0.57 0.3 -0.32
26 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.56 0.32 -0.34
27 AT5G06040 self-incompatibility protein-related 0.56 0.31 -0.3
28 AT1G68760 nudix hydrolase 1 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 1, nudix
hydrolase 1, nudix hydrolase 1,
NUDIX HYDROLASE 1		 0.56 0.32 -0.34
29 AT3G54630 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80
(InterPro:IPR005550); Has 24780 Blast hits to 15608
proteins in 1321 species: Archae - 545; Bacteria - 2969;
Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39;
Other Eukaryotes - 4868 (source: NCBI BLink).		 -0.56 0.32 -0.32
30 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 0.55 0.32 -0.34
31 AT2G16840 transposable element gene -0.55 0.3 -0.3
32 AT1G75600 Histone superfamily protein -0.55 0.29 -0.32
33 AT5G51420 long-chain-alcohol O-fatty-acyltransferase family protein /
wax synthase family protein		 0.55 0.3 -0.3
34 AT1G09730 Cysteine proteinases superfamily protein 0.55 0.32 -0.3
35 AT1G62210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 20 Blast hits to 18 proteins in 7
species: Archae - 0; Bacteria - 4; Metazoa - 7; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 0.55 0.32 -0.31
36 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.55 0.33 -0.3
37 AT2G47430 Signal transduction histidine kinase CYTOKININ-INDEPENDENT 1 0.55 0.3 -0.3
38 AT1G61490 S-locus lectin protein kinase family protein 0.54 0.35 -0.31
39 AT5G28810 Domain of unknown function (DUF1985) -0.54 0.31 -0.3
40 AT1G67270 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 -0.54 0.32 -0.32
41 AT4G21300 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.3 -0.3
42 AT2G10380 transposable element gene -0.54 0.3 -0.33
43 AT5G33200 transposable element gene -0.53 0.32 -0.33
44 AT5G48280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.53 0.3 -0.3
45 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.53 0.3 -0.31
46 AT3G13782 nucleosome assembly protein1;4 nucleosome assembly protein1;4,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 4		 0.53 0.3 -0.33
47 AT2G12900 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.53 0.34 -0.32
48 AT5G41490 F-box associated ubiquitination effector family protein -0.52 0.3 -0.31
49 AT3G57100 Protein of unknown function (DUF677) -0.52 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0198 Phosphatidylethanolamine-34:0 - - - 0.72 0.44 -0.45
51 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.64 0.42 -0.47 C0233