AT5G59380 : ATMBD6
Query Information
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AGICode AT5G59380
Description methyl-CPG-binding domain 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 1 0.3 -0.31
2 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 0.77 0.32 -0.31
3 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 -0.72 0.31 -0.33
4 AT5G43520 Cysteine/Histidine-rich C1 domain family protein 0.69 0.33 -0.31
5 AT4G02270 root hair specific 13 root hair specific 13 0.68 0.34 -0.33
6 AT5G19800 hydroxyproline-rich glycoprotein family protein 0.67 0.32 -0.32
7 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 0.67 0.3 -0.33
8 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.67 0.3 -0.33
9 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.67 0.32 -0.28
10 AT1G68630 PLAC8 family protein -0.67 0.31 -0.31
11 AT5G01110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.32 -0.31
12 AT4G25820 xyloglucan endotransglucosylase/hydrolase 14 ATXTH14, xyloglucan
endotransglucosylase/hydrolase 14,
xyloglucan endotransglycosylase 9		 0.66 0.29 -0.3
13 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.66 0.32 -0.32
14 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 0.65 0.33 -0.3
15 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 0.65 0.29 -0.32
16 AT1G09575 Protein of unknown function (DUF607) 0.65 0.31 -0.31
17 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.64 0.31 -0.31
18 AT5G35190 proline-rich extensin-like family protein extensin 13 0.64 0.32 -0.33
19 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 -0.63 0.33 -0.31
20 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.63 0.34 -0.31
21 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 -0.63 0.31 -0.31
22 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA -0.63 0.31 -0.31
23 AT3G55130 white-brown complex homolog 19 ATP-binding cassette G19,
white-brown complex homolog 19,
white-brown complex homolog 19		 -0.63 0.34 -0.31
24 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.63 0.3 -0.33
25 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 -0.63 0.29 -0.31
26 AT1G30870 Peroxidase superfamily protein 0.63 0.32 -0.3
27 AT5G05500 Pollen Ole e 1 allergen and extensin family protein MOP10 0.62 0.32 -0.31
28 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.62 0.33 -0.35
29 AT2G31510 IBR domain-containing protein ARIADNE 7, ARABIDOPSIS ARIADNE 7 -0.62 0.32 -0.35
30 AT3G55720 Protein of unknown function (DUF620) 0.62 0.32 -0.32
31 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein 0.62 0.34 -0.31
32 AT4G08410 Proline-rich extensin-like family protein 0.62 0.32 -0.32
33 AT1G44050 Cysteine/Histidine-rich C1 domain family protein 0.62 0.33 -0.31
34 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.61 0.32 -0.31
35 AT1G65570 Pectin lyase-like superfamily protein 0.61 0.32 -0.31
36 AT5G38700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible, LP.12 twelve leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.29 -0.31
37 AT1G68420 Class II aaRS and biotin synthetases superfamily protein -0.61 0.32 -0.31
38 AT3G02830 zinc finger protein 1 zinc finger protein 1 -0.61 0.32 -0.3
39 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.33 -0.33
40 AT4G26630 DEK domain-containing chromatin associated protein -0.61 0.33 -0.31
41 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.61 0.34 -0.29
42 AT2G28810 Dof-type zinc finger DNA-binding family protein -0.6 0.29 -0.33
43 AT2G25240 Serine protease inhibitor (SERPIN) family protein 0.6 0.3 -0.33
44 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 -0.6 0.32 -0.33
45 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 0.6 0.31 -0.3
46 AT1G12560 expansin A7 ATEXP7, expansin A7, ATHEXP ALPHA
1.26, EXP7, expansin A7		 0.6 0.31 -0.3
47 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.6 0.32 -0.32
48 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.6 0.31 -0.29
49 AT1G29820 Magnesium transporter CorA-like family protein 0.59 0.32 -0.33
50 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 0.59 0.3 -0.33
51 AT3G62680 proline-rich protein 3 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 3, proline-rich protein 3		 0.59 0.33 -0.33
52 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 -0.59 0.32 -0.33
53 AT2G41810 Protein of unknown function, DUF642 0.59 0.33 -0.32
54 AT4G18130 phytochrome E phytochrome E -0.59 0.31 -0.33
55 AT5G46240 potassium channel in Arabidopsis thaliana 1 potassium channel in Arabidopsis
thaliana 1		 -0.59 0.32 -0.32
56 AT3G15630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast
hits to 61 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.33
57 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.58 0.3 -0.31
58 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION 0.58 0.3 -0.32
59 AT5G58390 Peroxidase superfamily protein -0.58 0.32 -0.3
60 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 -0.58 0.3 -0.31
61 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 0.58 0.31 -0.34
62 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.58 0.3 -0.3
63 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A 0.58 0.33 -0.32
64 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.58 0.31 -0.29
65 AT4G13020 Protein kinase superfamily protein MHK -0.58 0.3 -0.32
66 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 -0.57 0.31 -0.31
67 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.57 0.33 -0.31
68 AT3G20620 F-box family protein-related -0.57 0.31 -0.35
69 AT1G70110 Concanavalin A-like lectin protein kinase family protein 0.57 0.29 -0.32
70 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.57 0.32 -0.3
71 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 -0.57 0.3 -0.31
72 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 -0.57 0.31 -0.33
73 AT2G12610 transposable element gene 0.56 0.33 -0.31
74 AT2G42270 U5 small nuclear ribonucleoprotein helicase -0.56 0.33 -0.33
75 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.56 0.33 -0.32
76 AT5G36270 pseudogene of dehydroascorbate reductase 0.56 0.28 -0.31
77 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.56 0.29 -0.31
78 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 -0.56 0.31 -0.31
79 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 0.55 0.31 -0.31
80 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 0.55 0.34 -0.29
81 AT5G12430 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 16 -0.55 0.3 -0.32
82 AT1G02813 Protein of unknown function, DUF538 0.55 0.29 -0.3
83 AT5G38120 AMP-dependent synthetase and ligase family protein 4CL8 -0.55 0.33 -0.3
84 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.33 -0.31
85 AT4G27350 Protein of unknown function (DUF1223) 0.55 0.29 -0.31
86 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.55 0.34 -0.34
87 AT4G32660 Protein kinase superfamily protein AME3 -0.55 0.33 -0.31
88 AT3G25170 ralf-like 26 ralf-like 26 -0.54 0.31 -0.3
89 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.54 0.31 -0.31
90 AT2G13560 NAD-dependent malic enzyme 1 NAD-dependent malic enzyme 1 -0.54 0.32 -0.3
91 AT5G17980 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.54 0.31 -0.33
92 AT4G19430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.32 -0.32
93 AT4G11950 Protein of unknown function (DUF1191) -0.54 0.34 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		-0.59 0.31 -0.33 C0232