AGICode | AT5G59060 |
Description | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G59060 | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.3 | -0.35 | |||
2 | AT2G17110 | Protein of unknown function (DUF630 and DUF632) | -0.64 | 0.3 | -0.32 | |||
3 | AT1G12720 | transposable element gene | -0.62 | 0.33 | -0.34 | |||
4 | AT1G33540 | serine carboxypeptidase-like 18 | serine carboxypeptidase-like 18 | 0.6 | 0.33 | -0.3 | ||
5 | AT3G05390 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.59 | 0.31 | -0.33 | |||
6 | AT3G13280 | Putative endonuclease or glycosyl hydrolase | -0.59 | 0.31 | -0.33 | |||
7 | AT1G10620 | Protein kinase superfamily protein | proline-rich extensin-like receptor kinase 11, proline-rich extensin-like receptor kinase 11 |
-0.59 | 0.32 | -0.31 | ||
8 | AT5G45200 | Disease resistance protein (TIR-NBS-LRR class) family | -0.58 | 0.31 | -0.29 | |||
9 | AT1G10520 | DNA polymerase lambda (POLL) | AtPol{lambda}, DNA polymerase {lambda} |
0.57 | 0.31 | -0.3 | ||
10 | AT3G59270 | FBD-like domain family protein | -0.57 | 0.32 | -0.32 | |||
11 | AT3G04220 | Disease resistance protein (TIR-NBS-LRR class) family | -0.57 | 0.3 | -0.31 | |||
12 | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
-0.56 | 0.33 | -0.35 | |||
13 | AT5G03400 | unknown protein; Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
-0.55 | 0.33 | -0.34 | |||
14 | AT1G48360 | zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides |
-0.55 | 0.32 | -0.29 | |||
15 | AT1G77590 | long chain acyl-CoA synthetase 9 | long chain acyl-CoA synthetase 9 | -0.55 | 0.33 | -0.33 | ||
16 | AT5G51420 | long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein |
-0.54 | 0.3 | -0.29 | |||
17 | AT5G44510 | target of AVRB operation1 | target of AVRB operation1 | -0.54 | 0.33 | -0.3 | ||
18 | AT2G15410 | transposable element gene | -0.54 | 0.3 | -0.31 | |||
19 | AT5G09360 | laccase 14 | laccase 14 | -0.53 | 0.33 | -0.32 | ||
20 | AT1G34090 | transposable element gene | 0.53 | 0.32 | -0.32 | |||
21 | AT2G03130 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
0.53 | 0.33 | -0.31 | |||
22 | AT3G20040 | Hexokinase | ATHXK4, HEXOKINASE-LIKE 2 | -0.53 | 0.29 | -0.3 | ||
23 | AT1G35545 | other RNA | 0.52 | 0.28 | -0.34 | |||
24 | AT2G05980 | transposable element gene | -0.52 | 0.33 | -0.33 | |||
25 | AT2G06700 | transposable element gene | -0.51 | 0.3 | -0.3 | |||
26 | AT4G16710 | glycosyltransferase family protein 28 | 0.51 | 0.31 | -0.31 | |||
27 | AT5G47250 | LRR and NB-ARC domains-containing disease resistance protein |
-0.51 | 0.3 | -0.31 | |||
28 | AT4G01740 | Cysteine/Histidine-rich C1 domain family protein | 0.51 | 0.33 | -0.32 | |||
29 | AT3G29220 | transposable element gene | -0.51 | 0.32 | -0.29 | |||
30 | AT3G32300 | transposable element gene | 0.51 | 0.33 | -0.32 | |||
31 | AT1G78360 | glutathione S-transferase TAU 21 | glutathione S-transferase TAU 21, glutathione S-transferase TAU 21 |
0.5 | 0.32 | -0.32 | ||
32 | AT1G19930 | Galactose oxidase/kelch repeat superfamily protein | -0.5 | 0.31 | -0.31 | |||
33 | AT5G35760 | Beta-galactosidase related protein | 0.5 | 0.31 | -0.33 | |||
34 | AT1G06540 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits to 16 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.34 | -0.32 | |||
35 | AT2G18760 | chromatin remodeling 8 | chromatin remodeling 8 | -0.5 | 0.28 | -0.32 | ||
36 | AT5G56640 | myo-inositol oxygenase 5 | myo-inositol oxygenase 5 | 0.5 | 0.31 | -0.31 | ||
37 | AT1G67450 | F-box and associated interaction domains-containing protein | -0.5 | 0.31 | -0.33 | |||
38 | AT5G55550 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.49 | 0.31 | -0.32 | |||
39 | AT4G04760 | Major facilitator superfamily protein | -0.49 | 0.3 | -0.31 | |||
40 | AT5G50140 | Ankyrin repeat family protein | -0.49 | 0.3 | -0.32 | |||
41 | AT3G61340 | F-box and associated interaction domains-containing protein | 0.49 | 0.31 | -0.33 | |||
42 | AT3G55180 | alpha/beta-Hydrolases superfamily protein | -0.49 | 0.32 | -0.3 | |||
43 | AT5G44500 | Small nuclear ribonucleoprotein family protein | 0.49 | 0.32 | -0.32 | |||
44 | AT1G28640 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.49 | 0.3 | -0.31 | |||
45 | AT5G63760 | RING/U-box superfamily protein | ARIADNE 15, ARABIDOPSIS ARIADNE 15 | 0.49 | 0.34 | -0.3 | ||
46 | AT3G01460 | methyl-CPG-binding domain 9 | ATMBD9, methyl-CPG-binding domain 9 |
-0.49 | 0.28 | -0.32 | ||
47 | AT1G73490 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.49 | 0.31 | -0.32 | |||
48 | AT5G61850 | floral meristem identity control protein LEAFY (LFY) | LEAFY, LEAFY 3 | -0.49 | 0.32 | -0.31 | ||
49 | AT1G06020 | pfkB-like carbohydrate kinase family protein | -0.48 | 0.33 | -0.28 | |||
50 | AT5G60190 | Cysteine proteinases superfamily protein | 0.48 | 0.33 | -0.31 | |||
51 | AT5G43110 | pumilio 14 | pumilio 14, pumilio 14 | -0.48 | 0.33 | -0.31 | ||
52 | AT5G36870 | glucan synthase-like 9 | glucan synthase-like 9, atgsl9, gsl09, glucan synthase-like 9 |
-0.47 | 0.32 | -0.29 | ||
53 | AT5G51620 | Uncharacterised protein family (UPF0172) | 0.47 | 0.3 | -0.33 | |||
54 | AT4G36000 | Pathogenesis-related thaumatin superfamily protein | 0.46 | 0.3 | -0.32 | |||
55 | AT5G51800 | Protein kinase superfamily protein | 0.46 | 0.31 | -0.33 | |||
56 | AT5G35280 | transposable element gene | 0.46 | 0.29 | -0.34 | |||
57 | AT3G30720 | qua-quine starch | QUA-QUINE STARCH | 0.45 | 0.3 | -0.31 | ||
58 | AT5G56380 | F-box/RNI-like/FBD-like domains-containing protein | 0.45 | 0.31 | -0.29 | |||
59 | AT5G46510 | Disease resistance protein (TIR-NBS-LRR class) family | 0.44 | 0.3 | -0.32 | |||
60 | AT1G79250 | AGC kinase 1.7 | AGC kinase 1.7 | 0.44 | 0.33 | -0.3 |