AT5G58180 : ATYKT62
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AGICode AT5G58180
Description Synaptobrevin family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 1 0.31 -0.32
2 AT2G05000 transposable element gene -0.77 0.3 -0.31
3 AT1G56160 myb domain protein 72 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 72, myb domain protein 72
0.74 0.31 -0.31
4 AT2G46300 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
0.73 0.31 -0.33
5 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein 0.73 0.27 -0.33
6 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 0.73 0.32 -0.32
7 AT1G10900 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.73 0.33 -0.32
8 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 -0.72 0.31 -0.31
9 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.72 0.3 -0.32
10 AT2G15700 transposable element gene -0.72 0.3 -0.3
11 AT5G60860 RAB GTPase homolog A1F RAB GTPase homolog A1F, RAB GTPase
homolog A1F
0.71 0.31 -0.33
12 AT1G04670 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.71 0.31 -0.29
13 AT4G18420 transposable element gene -0.71 0.32 -0.32
14 AT5G58640 Selenoprotein, Rdx type 0.71 0.33 -0.32
15 AT4G03040 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT5G33330.1); Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.7 0.3 -0.3
16 AT5G54420 Protein of unknown function (DUF295) -0.7 0.33 -0.31
17 AT2G14835 RING/U-box superfamily protein 0.7 0.34 -0.3
18 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11
-0.7 0.33 -0.31
19 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).
0.7 0.33 -0.31
20 AT1G05610 ADP-glucose pyrophosphorylase small subunit 2 ADP-glucose pyrophosphorylase
small subunit 2
0.7 0.31 -0.32
21 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A
0.69 0.32 -0.33
22 AT2G16040 hAT dimerisation domain-containing protein /
transposase-related
0.69 0.31 -0.31
23 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5
0.69 0.31 -0.33
24 AT5G13670 nodulin MtN21 /EamA-like transporter family protein -0.69 0.34 -0.3
25 AT5G02280 SNARE-like superfamily protein 0.69 0.33 -0.31
26 AT5G51260 HAD superfamily, subfamily IIIB acid phosphatase 0.69 0.34 -0.31
27 AT2G21910 cytochrome P450, family 96, subfamily A, polypeptide 5 cytochrome P450, family 96,
subfamily A, polypeptide 5
0.69 0.32 -0.31
28 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
MYOSIN VIII B, VIIIB -0.69 0.31 -0.3
29 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein 0.69 0.32 -0.3
30 AT3G24280 small acidic protein 2 small acidic protein 2 -0.69 0.33 -0.31
31 AT1G59710 Protein of unknown function (DUF569) 0.68 0.31 -0.3
32 AT2G29820 Galactose oxidase/kelch repeat superfamily protein -0.68 0.33 -0.34
33 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.68 0.32 -0.32
34 ATMG00320 hypothetical protein ORF127 0.68 0.33 -0.29
35 AT2G40440 BTB/POZ domain-containing protein -0.68 0.31 -0.31
36 AT3G49510 F-box family protein 0.68 0.3 -0.28
37 AT3G15040 Protein of unknown function, DUF584 0.68 0.31 -0.31
38 AT1G35995 transposable element gene 0.67 0.32 -0.3
39 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C
0.67 0.34 -0.31
40 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1
-0.67 0.32 -0.31
41 AT5G29100 transposable element gene -0.67 0.31 -0.32
42 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1
0.67 0.31 -0.3
43 AT1G02050 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 6 -0.67 0.31 -0.32
44 AT4G05060 PapD-like superfamily protein 0.67 0.32 -0.31
45 AT3G49270 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING:
4 anthesis, C globular stage, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: proline-rich family protein (TAIR:AT3G49300.1); Has 63
Blast hits to 43 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 31; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).
0.67 0.3 -0.31
46 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.67 0.31 -0.31
47 AT3G46390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G32337.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.67 0.32 -0.31
48 AT1G64820 MATE efflux family protein 0.67 0.32 -0.31
49 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).
0.67 0.32 -0.3
50 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45
-0.66 0.32 -0.31
51 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).
-0.66 0.31 -0.31
52 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).
0.66 0.31 -0.32
53 AT3G15605 nucleic acid binding -0.66 0.31 -0.33
54 AT1G23070 Protein of unknown function (DUF300) 0.66 0.31 -0.31
55 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.66 0.31 -0.34
56 AT5G30380 transposable element gene -0.66 0.34 -0.31
57 AT1G61460 S-locus protein kinase, putative 0.66 0.31 -0.31
58 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 -0.66 0.3 -0.32
59 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.66 0.32 -0.31
60 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 -0.66 0.33 -0.35
61 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein 0.66 0.31 -0.31
62 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78
0.66 0.32 -0.31
63 AT5G47100 calcineurin B-like protein 9 ATCBL9, calcineurin B-like protein
9
-0.66 0.31 -0.34
64 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3
-0.66 0.3 -0.3
65 AT1G18220 purine permease 9 purine permease 9, purine permease
9
-0.66 0.33 -0.31
66 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A
0.66 0.34 -0.31
67 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 0.65 0.31 -0.31
68 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 -0.65 0.33 -0.31
69 AT3G51520 diacylglycerol acyltransferase family 0.65 0.3 -0.32
70 AT1G23570 Domain of unknown function (DUF220) 0.65 0.34 -0.31
71 AT1G72180 Leucine-rich receptor-like protein kinase family protein 0.65 0.32 -0.34
72 AT3G60590 unknown protein; LOCATED IN: chloroplast, chloroplast inner
membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19
species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).
0.65 0.3 -0.33
73 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1
0.65 0.3 -0.31
74 AT1G48670 auxin-responsive GH3 family protein -0.65 0.31 -0.3
75 AT5G46500 BEST Arabidopsis thaliana protein match is: disease
resistance protein (TIR-NBS-LRR class) family
(TAIR:AT5G46260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.65 0.3 -0.32
76 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 0.65 0.33 -0.32
77 AT2G46590 Dof-type zinc finger DNA-binding family protein DOF AFFECTING GERMINATION 2 -0.65 0.32 -0.31
78 AT5G11370 FBD / Leucine Rich Repeat domains containing protein 0.65 0.31 -0.32
79 AT4G17585 Aluminium activated malate transporter family protein -0.65 0.31 -0.3
80 AT2G40050 Cysteine/Histidine-rich C1 domain family protein 0.65 0.35 -0.32
81 AT1G70650 Ran BP2/NZF zinc finger-like superfamily protein -0.65 0.32 -0.31
82 AT2G39720 RING-H2 finger C2A RING-H2 finger C2A 0.65 0.34 -0.32
83 AT4G07586 transposable element gene -0.65 0.32 -0.32
84 AT1G27820 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein
0.65 0.29 -0.32
85 AT3G42320 transposable element gene -0.65 0.32 -0.31
86 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.31
87 AT1G20150 Subtilisin-like serine endopeptidase family protein -0.65 0.31 -0.3
88 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.65 0.33 -0.32
89 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1
0.65 0.31 -0.33
90 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.64 0.33 -0.31
91 AT3G42600 transposable element gene -0.64 0.32 -0.3
92 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.64 0.32 -0.32
93 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 -0.64 0.32 -0.31
94 AT3G25280 Major facilitator superfamily protein -0.64 0.32 -0.32
95 AT5G08210 MIR834a; miRNA microRNA834A -0.64 0.33 -0.33
96 AT1G03620 ELMO/CED-12 family protein -0.64 0.33 -0.31
97 AT4G13060 F-box associated ubiquitination effector family protein -0.64 0.28 -0.31
98 AT5G43610 sucrose-proton symporter 6 sucrose-proton symporter 6,
sucrose-proton symporter 6
-0.64 0.3 -0.32
99 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE
0.64 0.31 -0.32
100 AT3G48480 Cysteine proteinases superfamily protein -0.64 0.3 -0.31
101 AT5G20420 chromatin remodeling 42 chromatin remodeling 42 -0.64 0.31 -0.32
102 AT4G07640 transposable element gene -0.64 0.31 -0.3
103 AT1G20750 RAD3-like DNA-binding helicase protein 0.64 0.32 -0.33
104 AT5G27190 transposable element gene -0.64 0.3 -0.32
105 AT2G15325 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
0.64 0.31 -0.34
106 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.64 0.31 -0.31
107 AT2G47020 Peptide chain release factor 1 -0.63 0.3 -0.31
108 AT4G14390 Ankyrin repeat family protein -0.63 0.35 -0.34
109 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2
-0.63 0.3 -0.33
110 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein
0.63 0.32 -0.32
111 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2
0.63 0.31 -0.32
112 AT4G17670 Protein of unknown function (DUF581) 0.63 0.31 -0.3
113 AT4G15200 formin 3 formin 3, formin 3 -0.63 0.31 -0.32
114 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1
-0.63 0.29 -0.33
115 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).
0.63 0.32 -0.3
116 AT5G39640 Putative endonuclease or glycosyl hydrolase -0.63 0.32 -0.31
117 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.32 -0.34
118 AT4G23930 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family
0.63 0.3 -0.31
119 AT3G11980 Jojoba acyl CoA reductase-related male sterility protein FATTY ACID REDUCTASE 2, MALE
STERILITY 2
-0.63 0.32 -0.31
120 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5
0.63 0.33 -0.34
121 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
0.63 0.3 -0.32
122 AT1G80870 Protein kinase superfamily protein -0.63 0.3 -0.31
123 AT3G19680 Protein of unknown function (DUF1005) 0.63 0.29 -0.32
124 AT5G50020 DHHC-type zinc finger family protein 0.63 0.32 -0.32
125 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23
0.63 0.32 -0.31
126 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS -0.63 0.3 -0.31
127 AT3G42530 transposable element gene -0.63 0.32 -0.31
128 AT1G18610 Galactose oxidase/kelch repeat superfamily protein -0.63 0.29 -0.33
129 AT2G11650 transposable element gene -0.62 0.33 -0.3
130 AT3G18120 F-box associated ubiquitination effector family protein -0.62 0.3 -0.31
131 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.62 0.33 -0.34
132 AT1G18510 tetraspanin 16 tetraspanin 16 -0.62 0.32 -0.31
133 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.62 0.33 -0.31
134 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein
-0.61 0.3 -0.32
135 AT5G11570 Major facilitator superfamily protein -0.61 0.31 -0.3
136 AT4G19910 Toll-Interleukin-Resistance (TIR) domain family protein -0.61 0.32 -0.31
137 AT2G32360 Ubiquitin-like superfamily protein -0.61 0.32 -0.3
138 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.61 0.34 -0.32
139 AT2G46200 unknown protein; Has 2968 Blast hits to 2381 proteins in
310 species: Archae - 16; Bacteria - 188; Metazoa - 1070;
Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes -
1318 (source: NCBI BLink).
-0.61 0.3 -0.32
140 AT5G49470 PAS domain-containing protein tyrosine kinase family
protein
-0.61 0.31 -0.31
141 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)
-0.61 0.33 -0.32
142 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.34 -0.31
143 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.61 0.31 -0.33
144 AT2G14420 transposable element gene -0.6 0.31 -0.32
145 AT2G40680 transposable element gene -0.6 0.33 -0.33
146 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.6 0.29 -0.33
147 AT2G20510 translocase inner membrane subunit 44-1 translocase inner membrane subunit
44-1, translocase inner membrane
subunit 44-1
-0.6 0.32 -0.29
148 AT5G05260 cytochrome p450 79a2 cytochrome p450 79a2 -0.6 0.32 -0.33
149 AT1G72870 Disease resistance protein (TIR-NBS class) -0.6 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
150 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.61 0.32 -0.3