AGICode | AT5G57670 |
Description | Protein kinase superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G57670 | Protein kinase superfamily protein | 1 | 0.31 | -0.34 | |||
2 | AT2G17870 | cold shock domain protein 3 | ARABIDOPSIS COLD SHOCK DOMAIN PROTEIN 3, cold shock domain protein 3 |
-0.71 | 0.31 | -0.31 | ||
3 | AT3G55620 | Translation initiation factor IF6 | eukaryotic initiation facor 6A, embryo defective 1624 |
-0.71 | 0.3 | -0.3 | ||
4 | AT1G06710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.66 | 0.31 | -0.31 | |||
5 | AT1G43650 | nodulin MtN21 /EamA-like transporter family protein | 0.66 | 0.3 | -0.3 | |||
6 | AT2G34540 | unknown protein; Has 19 Blast hits to 19 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.31 | -0.31 | |||
7 | AT1G01940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.66 | 0.32 | -0.31 | |||
8 | AT1G75510 | Transcription initiation factor IIF, beta subunit | -0.65 | 0.33 | -0.32 | |||
9 | AT1G09010 | glycoside hydrolase family 2 protein | 0.65 | 0.34 | -0.3 | |||
10 | AT3G52040 | unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.33 | -0.32 | |||
11 | AT5G18540 | unknown protein; Has 2026 Blast hits to 792 proteins in 129 species: Archae - 2; Bacteria - 12; Metazoa - 1126; Fungi - 267; Plants - 292; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). |
-0.63 | 0.33 | -0.32 | |||
12 | AT5G22330 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATTIP49A, RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 |
-0.63 | 0.31 | -0.3 | ||
13 | AT3G05500 | Rubber elongation factor protein (REF) | -0.63 | 0.32 | -0.33 | |||
14 | AT3G21140 | Pyridoxamine 5'-phosphate oxidase family protein | -0.63 | 0.29 | -0.33 | |||
15 | AT5G04280 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
AtRZ-1c, RZ-1c | -0.63 | 0.3 | -0.31 | ||
16 | AT4G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.31 | -0.33 | |||
17 | AT1G43860 | sequence-specific DNA binding transcription factors | -0.62 | 0.32 | -0.33 | |||
18 | AT1G53210 | sodium/calcium exchanger family protein / calcium-binding EF hand family protein |
0.62 | 0.31 | -0.33 | |||
19 | AT5G37780 | calmodulin 1 | ACAM-1, calmodulin 1, TOUCH 1 | -0.62 | 0.3 | -0.3 | ||
20 | AT4G38900 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.62 | 0.29 | -0.32 | |||
21 | AT5G14510 | ARM repeat superfamily protein | 0.62 | 0.3 | -0.32 | |||
22 | AT1G10000 | Ribonuclease H-like superfamily protein | 0.62 | 0.3 | -0.3 | |||
23 | AT1G07030 | Mitochondrial substrate carrier family protein | -0.61 | 0.31 | -0.29 | |||
24 | AT2G36120 | Glycine-rich protein family | DEFECTIVELY ORGANIZED TRIBUTARIES 1 |
-0.61 | 0.3 | -0.32 | ||
25 | AT5G57280 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
root initiation defective 2 | -0.61 | 0.33 | -0.35 | ||
26 | AT1G19835 | Plant protein of unknown function (DUF869) | 0.61 | 0.34 | -0.34 | |||
27 | AT5G55610 | unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.32 | -0.31 | |||
28 | AT1G12830 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 39778 Blast hits to 22088 proteins in 1060 species: Archae - 152; Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants - 2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
29 | AT5G13310 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.6 | 0.33 | -0.32 | |||
30 | AT2G31360 | 16:0delta9 desaturase 2 | 16:0delta9 desaturase 2, 16:0delta9 desaturase 2 |
-0.6 | 0.33 | -0.3 | ||
31 | AT4G39230 | NmrA-like negative transcriptional regulator family protein | -0.6 | 0.3 | -0.32 | |||
32 | AT2G35950 | embryo sac development arrest 12 | embryo sac development arrest 12 | 0.6 | 0.33 | -0.31 | ||
33 | AT5G53470 | acyl-CoA binding protein 1 | ACYL-COA BINDING PROTEIN, acyl-CoA binding protein 1 |
-0.6 | 0.32 | -0.31 | ||
34 | AT3G51700 | PIF1 helicase | 0.59 | 0.28 | -0.32 | |||
35 | AT1G56345 | Pseudouridine synthase family protein | -0.59 | 0.33 | -0.31 | |||
36 | AT5G38890 | Nucleic acid-binding, OB-fold-like protein | -0.59 | 0.33 | -0.33 | |||
37 | AT3G26120 | terminal EAR1-like 1 | terminal EAR1-like 1 | 0.59 | 0.29 | -0.32 | ||
38 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
0.59 | 0.31 | -0.31 | ||
39 | AT2G16500 | arginine decarboxylase 1 | arginine decarboxylase 1, ARGDC, ARGDC1, SPE1 |
-0.59 | 0.3 | -0.32 | ||
40 | AT5G62160 | zinc transporter 12 precursor | zinc transporter 12 precursor, zinc transporter 12 precursor |
0.59 | 0.31 | -0.3 | ||
41 | AT5G54350 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.59 | 0.33 | -0.31 | |||
42 | AT4G28420 | Tyrosine transaminase family protein | 0.59 | 0.3 | -0.32 | |||
43 | AT1G31940 | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.32 | |||
44 | ATCG00080 | photosystem II reaction center protein I | photosystem II reaction center protein I |
0.59 | 0.32 | -0.33 | ||
45 | AT1G54610 | Protein kinase superfamily protein | -0.59 | 0.29 | -0.3 | |||
46 | AT4G14900 | FRIGIDA-like protein | -0.58 | 0.3 | -0.31 | |||
47 | AT5G09450 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.31 | -0.31 | |||
48 | AT3G49725 | GTP-binding protein, HflX | -0.58 | 0.34 | -0.31 | |||
49 | AT2G26460 | RED family protein | SUPPRESSORS OF MEC-8 AND UNC-52 2 | -0.58 | 0.3 | -0.3 | ||
50 | AT1G55150 | DEA(D/H)-box RNA helicase family protein | -0.58 | 0.32 | -0.31 | |||
51 | AT4G39260 | cold, circadian rhythm, and RNA binding 1 | GLYCINE-RICH PROTEIN 8, cold, circadian rhythm, and RNA binding 1, glycine-rich RNA-binding protein 8, GRP8 |
-0.58 | 0.32 | -0.31 | ||
52 | AT3G01820 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.57 | 0.33 | -0.33 | |||
53 | AT5G11180 | glutamate receptor 2.6 | ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 2.6, glutamate receptor 2.6 |
0.57 | 0.33 | -0.31 | ||
54 | AT4G30940 | BTB/POZ domain with WD40/YVTN repeat-like protein | 0.57 | 0.31 | -0.33 | |||
55 | AT2G27100 | C2H2 zinc-finger protein SERRATE (SE) | SERRATE | -0.57 | 0.32 | -0.33 | ||
56 | AT1G23820 | spermidine synthase 1 | spermidine synthase 1 | -0.57 | 0.32 | -0.31 | ||
57 | AT5G40960 | Protein of unknown function (DUF 3339) | 0.57 | 0.32 | -0.31 | |||
58 | AT3G17310 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
AtDRM3, domains rearranged methyltransferase 3 |
0.56 | 0.31 | -0.32 | ||
59 | AT5G67530 | plant U-box 49 | PLANT U-BOX 49, plant U-box 49 | -0.56 | 0.32 | -0.31 | ||
60 | AT1G03040 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.56 | 0.3 | -0.32 | |||
61 | AT4G05370 | BCS1 AAA-type ATPase | -0.56 | 0.32 | -0.33 | |||
62 | AT5G39680 | Pentatricopeptide repeat (PPR) superfamily protein | EMBRYO DEFECTIVE 2744 | -0.56 | 0.33 | -0.31 | ||
63 | AT3G12570 | FYD | FYD | -0.56 | 0.3 | -0.33 | ||
64 | AT1G67540 | unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.36 | -0.31 | |||
65 | AT5G66100 | winged-helix DNA-binding transcription factor family protein |
-0.56 | 0.32 | -0.32 | |||
66 | AT1G23220 | Dynein light chain type 1 family protein | -0.56 | 0.32 | -0.31 | |||
67 | AT2G45520 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). |
-0.55 | 0.32 | -0.33 | |||
68 | AT5G04670 | Enhancer of polycomb-like transcription factor protein | -0.55 | 0.33 | -0.33 | |||
69 | AT2G36040 | transposable element gene | 0.55 | 0.29 | -0.35 | |||
70 | AT2G31370 | Basic-leucine zipper (bZIP) transcription factor family protein |
-0.55 | 0.3 | -0.31 | |||
71 | AT4G30200 | vernalization5/VIN3-like | vernalization5/VIN3-like 1, VIN3-Like 2 |
0.55 | 0.33 | -0.31 | ||
72 | AT3G23590 | REF4-related 1 | MED33A, REF4-related 1 | 0.55 | 0.31 | -0.33 | ||
73 | AT3G58890 | RNI-like superfamily protein | 0.55 | 0.32 | -0.32 | |||
74 | AT5G12190 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.55 | 0.32 | -0.32 | |||
75 | AT3G16130 | RHO guanyl-nucleotide exchange factor 13 | ATROPGEF13, phytochrome interacting RopGEF 2, RHO guanyl-nucleotide exchange factor 13 |
0.55 | 0.31 | -0.33 | ||
76 | AT3G15351 | unknown protein; Has 50 Blast hits to 50 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.34 | |||
77 | AT1G04260 | CAMV movement protein interacting protein 7 | CAMV movement protein interacting protein 7, CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7, PRENYLATED RAB ACCEPTOR 1.D |
-0.55 | 0.31 | -0.31 | ||
78 | AT3G42710 | transposable element gene | -0.55 | 0.32 | -0.33 | |||
79 | AT1G16650 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.54 | 0.34 | -0.33 | |||
80 | AT1G80040 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.54 | 0.32 | -0.31 | |||
81 | AT1G17130 | Family of unknown function (DUF572) | -0.54 | 0.32 | -0.32 | |||
82 | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | -0.54 | 0.32 | -0.32 | |||
83 | AT5G25990 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.54 | 0.32 | -0.33 | |||
84 | AT2G26830 | Protein kinase superfamily protein | embryo defective 1187 | -0.54 | 0.33 | -0.31 | ||
85 | AT1G11160 | Transducin/WD40 repeat-like superfamily protein | 0.53 | 0.3 | -0.33 | |||
86 | AT4G33890 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 133 Blast hits to 131 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 129; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.53 | 0.28 | -0.32 | |||
87 | AT4G15040 | Subtilisin-like serine endopeptidase family protein | 0.53 | 0.31 | -0.34 | |||
88 | AT2G17000 | Mechanosensitive ion channel family protein | 0.53 | 0.31 | -0.33 | |||
89 | AT5G66820 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.53 | 0.31 | -0.33 | |||
90 | AT1G21850 | SKU5 similar 8 | SKU5 similar 8 | 0.52 | 0.32 | -0.32 | ||
91 | AT3G43940 | unknown protein; Has 24 Blast hits to 24 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.3 | -0.31 | |||
92 | AT5G39910 | Pectin lyase-like superfamily protein | 0.52 | 0.31 | -0.31 | |||
93 | AT5G04560 | HhH-GPD base excision DNA repair family protein | DEMETER | 0.52 | 0.32 | -0.32 | ||
94 | AT3G29220 | transposable element gene | 0.52 | 0.31 | -0.33 | |||
95 | AT5G40260 | Nodulin MtN3 family protein | AtSWEET8, SWEET8 | 0.52 | 0.33 | -0.32 | ||
96 | AT3G30340 | nodulin MtN21 /EamA-like transporter family protein | 0.52 | 0.3 | -0.31 | |||
97 | AT4G18000 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
98 | C0136 | Lactic acid | D,L-Lactic acid | Lactate | pyruvate fermentation to lactate | -0.75 | 0.43 | -0.44 | ||
99 | C0184 | MST_3110.4 | - | - | - | 0.68 | 0.46 | -0.43 | ||
100 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.53 | 0.32 | -0.31 |