AGICode | AT5G57940 |
Description | cyclic nucleotide gated channel 5 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G57940 | cyclic nucleotide gated channel 5 | cyclic nucleotide gated channel 5, cyclic nucleotide gated channel 5 |
1 | 0.31 | -0.32 | ||
2 | AT5G40970 | Protein of unknown function (DUF 3339) | 0.69 | 0.3 | -0.31 | |||
3 | AT4G17220 | microtubule-associated proteins 70-5 | microtubule-associated proteins 70-5, microtubule-associated proteins 70-5 |
-0.65 | 0.34 | -0.3 | ||
4 | AT1G51310 | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases |
0.63 | 0.31 | -0.3 | |||
5 | AT3G22360 | alternative oxidase 1B | alternative oxidase 1B | -0.63 | 0.31 | -0.33 | ||
6 | AT1G49250 | ATP-dependent DNA ligase | 0.62 | 0.31 | -0.34 | |||
7 | AT5G18560 | Integrase-type DNA-binding superfamily protein | PUCHI | -0.62 | 0.3 | -0.31 | ||
8 | AT2G39520 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.33 | -0.29 | |||
9 | AT1G71820 | SEC6 | SEC6 | 0.61 | 0.31 | -0.31 | ||
10 | AT1G49490 | Leucine-rich repeat (LRR) family protein | 0.6 | 0.33 | -0.3 | |||
11 | AT1G08500 | early nodulin-like protein 18 | AtENODL18, early nodulin-like protein 18 |
-0.6 | 0.34 | -0.33 | ||
12 | AT5G14430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.6 | 0.33 | -0.31 | |||
13 | AT3G16730 | CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). |
hypersensitive to excess boron 2 | -0.6 | 0.31 | -0.32 | ||
14 | AT1G05330 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.33 | -0.31 | |||
15 | AT4G10070 | KH domain-containing protein | 0.59 | 0.31 | -0.33 | |||
16 | AT4G38640 | Plasma-membrane choline transporter family protein | 0.59 | 0.34 | -0.34 | |||
17 | AT5G54570 | beta glucosidase 41 | beta glucosidase 41 | -0.59 | 0.33 | -0.31 | ||
18 | AT2G19580 | tetraspanin2 | tetraspanin2 | -0.58 | 0.32 | -0.32 | ||
19 | AT2G15380 | transposable element gene | 0.58 | 0.29 | -0.31 | |||
20 | AT4G11510 | ralf-like 28 | ralf-like 28 | 0.58 | 0.33 | -0.31 | ||
21 | ATCG01020 | ribosomal protein L32 | ribosomal protein L32 | 0.58 | 0.3 | -0.31 | ||
22 | AT1G53440 | Leucine-rich repeat transmembrane protein kinase | 0.58 | 0.31 | -0.32 | |||
23 | AT1G23880 | NHL domain-containing protein | 0.58 | 0.34 | -0.32 | |||
24 | AT1G26820 | ribonuclease 3 | ribonuclease 3 | -0.58 | 0.33 | -0.31 | ||
25 | AT5G27630 | acyl-CoA binding protein 5 | acyl-CoA binding protein 5 | 0.58 | 0.32 | -0.29 | ||
26 | AT5G45920 | SGNH hydrolase-type esterase superfamily protein | -0.58 | 0.33 | -0.31 | |||
27 | AT2G45830 | downstream target of AGL15 2 | downstream target of AGL15 2 | -0.57 | 0.33 | -0.3 | ||
28 | AT3G19500 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.57 | 0.32 | -0.3 | |||
29 | AT5G63760 | RING/U-box superfamily protein | ARIADNE 15, ARABIDOPSIS ARIADNE 15 | -0.57 | 0.3 | -0.3 | ||
30 | AT3G55020 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.57 | 0.32 | -0.31 | |||
31 | AT4G11880 | AGAMOUS-like 14 | AGAMOUS-like 14 | -0.56 | 0.29 | -0.3 | ||
32 | AT5G43900 | myosin 2 | ARABIDOPSIS MYOSIN 2, myosin 2, MYOSIN X1 2, MYOSIN XI-6 |
0.56 | 0.32 | -0.31 | ||
33 | AT4G09930 | Avirulence induced gene (AIG1) family protein | 0.56 | 0.35 | -0.32 | |||
34 | AT1G22990 | Heavy metal transport/detoxification superfamily protein | heavy metal associated isoprenylated plant protein 22 |
-0.55 | 0.32 | -0.31 | ||
35 | AT2G23900 | Pectin lyase-like superfamily protein | -0.55 | 0.33 | -0.31 | |||
36 | AT1G61850 | phospholipases;galactolipases | 0.55 | 0.31 | -0.31 | |||
37 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.32 | -0.32 | |||
38 | AT5G49070 | 3-ketoacyl-CoA synthase 21 | 3-ketoacyl-CoA synthase 21 | 0.55 | 0.31 | -0.31 | ||
39 | AT5G11080 | Ubiquitin-like superfamily protein | 0.55 | 0.32 | -0.32 | |||
40 | AT4G17350 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
-0.54 | 0.28 | -0.29 | |||
41 | AT1G53390 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATP-binding cassette G24 | 0.54 | 0.32 | -0.31 | ||
42 | AT2G36090 | F-box family protein | -0.54 | 0.32 | -0.32 | |||
43 | AT5G66150 | Glycosyl hydrolase family 38 protein | 0.54 | 0.34 | -0.31 | |||
44 | AT3G14450 | CTC-interacting domain 9 | CTC-interacting domain 9 | 0.54 | 0.3 | -0.32 | ||
45 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.54 | 0.32 | -0.31 | ||
46 | AT5G60070 | ankyrin repeat family protein | 0.54 | 0.34 | -0.3 | |||
47 | AT4G12330 | cytochrome P450, family 706, subfamily A, polypeptide 7 | cytochrome P450, family 706, subfamily A, polypeptide 7 |
-0.54 | 0.31 | -0.3 | ||
48 | AT2G39280 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.53 | 0.31 | -0.3 | |||
49 | AT3G15540 | indole-3-acetic acid inducible 19 | indole-3-acetic acid inducible 19, MASSUGU 2 |
-0.53 | 0.34 | -0.31 | ||
50 | AT5G60010 | ferric reductase-like transmembrane component family protein |
0.53 | 0.33 | -0.3 | |||
51 | AT1G55430 | Cysteine/Histidine-rich C1 domain family protein | -0.52 | 0.32 | -0.34 | |||
52 | AT2G33000 | ubiquitin-associated (UBA)/TS-N domain-containing protein-related |
-0.52 | 0.31 | -0.3 | |||
53 | AT2G20110 | Tesmin/TSO1-like CXC domain-containing protein | -0.52 | 0.32 | -0.28 | |||
54 | AT5G55060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
0.52 | 0.33 | -0.31 | |||
55 | AT1G52560 | HSP20-like chaperones superfamily protein | -0.52 | 0.31 | -0.31 | |||
56 | AT1G36110 | transposable element gene | 0.52 | 0.34 | -0.32 | |||
57 | AT4G07425 | transposable element gene | 0.52 | 0.33 | -0.33 | |||
58 | AT3G24060 | Plant self-incompatibility protein S1 family | 0.51 | 0.32 | -0.31 | |||
59 | AT1G62210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 20 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 4; Metazoa - 7; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.51 | 0.31 | -0.3 | |||
60 | AT2G46990 | indole-3-acetic acid inducible 20 | indole-3-acetic acid inducible 20 | -0.51 | 0.3 | -0.3 | ||
61 | AT4G38230 | calcium-dependent protein kinase 26 | ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26, calcium-dependent protein kinase 26 |
-0.5 | 0.31 | -0.32 | ||
62 | AT1G72060 | serine-type endopeptidase inhibitors | -0.5 | 0.31 | -0.3 | |||
63 | AT1G13130 | Cellulase (glycosyl hydrolase family 5) protein | -0.5 | 0.31 | -0.32 | |||
64 | AT5G12940 | Leucine-rich repeat (LRR) family protein | -0.49 | 0.29 | -0.3 | |||
65 | AT1G06770 | DREB2A-interacting protein 1 | DREB2A-interacting protein 1 | -0.49 | 0.3 | -0.31 | ||
66 | AT2G43660 | Carbohydrate-binding X8 domain superfamily protein | -0.49 | 0.31 | -0.3 | |||
67 | AT3G32300 | transposable element gene | -0.48 | 0.32 | -0.32 | |||
68 | AT4G18450 | Integrase-type DNA-binding superfamily protein | -0.47 | 0.32 | -0.32 | |||
69 | AT5G62420 | NAD(P)-linked oxidoreductase superfamily protein | -0.46 | 0.32 | -0.29 |