AT5G57290 : -
Query Information
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AGICode AT5G57290
Description 60S acidic ribosomal protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G57290 60S acidic ribosomal protein family 1 0.31 -0.32
2 AT2G44120 Ribosomal protein L30/L7 family protein 0.94 0.29 -0.32
3 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.94 0.31 -0.34
4 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.92 0.32 -0.33
5 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.91 0.34 -0.31
6 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.91 0.3 -0.3
7 AT5G27770 Ribosomal L22e protein family 0.91 0.32 -0.3
8 AT5G47700 60S acidic ribosomal protein family 0.9 0.31 -0.32
9 AT1G04480 Ribosomal protein L14p/L23e family protein 0.9 0.35 -0.32
10 AT1G34030 Ribosomal protein S13/S18 family 0.9 0.32 -0.31
11 AT3G47370 Ribosomal protein S10p/S20e family protein 0.9 0.3 -0.3
12 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.9 0.31 -0.31
13 AT2G19730 Ribosomal L28e protein family 0.9 0.31 -0.3
14 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.89 0.31 -0.32
15 AT1G67430 Ribosomal protein L22p/L17e family protein 0.89 0.31 -0.3
16 AT4G31985 Ribosomal protein L39 family protein 0.89 0.3 -0.3
17 AT2G39390 Ribosomal L29 family protein 0.89 0.3 -0.33
18 AT3G09500 Ribosomal L29 family protein 0.89 0.32 -0.33
19 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.88 0.31 -0.34
20 AT1G26880 Ribosomal protein L34e superfamily protein 0.88 0.29 -0.29
21 AT4G16720 Ribosomal protein L23/L15e family protein 0.87 0.33 -0.31
22 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.87 0.32 -0.31
23 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.31 -0.31
24 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.31 -0.29
25 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.87 0.32 -0.31
26 AT5G67510 Translation protein SH3-like family protein 0.87 0.33 -0.31
27 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.87 0.29 -0.32
28 AT3G23390 Zinc-binding ribosomal protein family protein 0.87 0.32 -0.31
29 AT5G23900 Ribosomal protein L13e family protein 0.87 0.33 -0.32
30 AT4G29410 Ribosomal L28e protein family 0.87 0.32 -0.3
31 AT3G09200 Ribosomal protein L10 family protein 0.87 0.32 -0.33
32 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.87 0.33 -0.3
33 AT1G75560 zinc knuckle (CCHC-type) family protein 0.87 0.32 -0.29
34 AT1G15250 Zinc-binding ribosomal protein family protein 0.86 0.3 -0.31
35 AT3G04920 Ribosomal protein S24e family protein 0.86 0.33 -0.34
36 AT2G27720 60S acidic ribosomal protein family 0.86 0.3 -0.34
37 AT2G01250 Ribosomal protein L30/L7 family protein 0.86 0.32 -0.31
38 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.86 0.35 -0.32
39 AT3G56340 Ribosomal protein S26e family protein 0.86 0.33 -0.3
40 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.86 0.29 -0.31
41 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.86 0.33 -0.32
42 AT4G25890 60S acidic ribosomal protein family 0.85 0.29 -0.31
43 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.85 0.33 -0.32
44 AT5G35530 Ribosomal protein S3 family protein 0.85 0.3 -0.32
45 AT2G36160 Ribosomal protein S11 family protein 0.85 0.33 -0.29
46 AT1G14980 chaperonin 10 chaperonin 10 0.85 0.31 -0.33
47 AT2G25210 Ribosomal protein L39 family protein 0.85 0.33 -0.32
48 AT1G74270 Ribosomal protein L35Ae family protein 0.85 0.32 -0.31
49 AT5G09510 Ribosomal protein S19 family protein 0.84 0.3 -0.3
50 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.84 0.32 -0.3
51 AT3G53890 Ribosomal protein S21e 0.84 0.34 -0.31
52 AT4G15000 Ribosomal L27e protein family 0.84 0.32 -0.33
53 AT2G33370 Ribosomal protein L14p/L23e family protein 0.84 0.29 -0.34
54 AT3G05560 Ribosomal L22e protein family 0.84 0.32 -0.32
55 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.84 0.32 -0.31
56 AT5G27700 Ribosomal protein S21e 0.84 0.29 -0.31
57 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.84 0.33 -0.28
58 AT4G13170 Ribosomal protein L13 family protein 0.84 0.31 -0.32
59 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.84 0.32 -0.31
60 AT5G56670 Ribosomal protein S30 family protein 0.84 0.33 -0.28
61 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.84 0.32 -0.3
62 AT4G02230 Ribosomal protein L19e family protein 0.84 0.32 -0.35
63 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.83 0.32 -0.31
64 AT2G44860 Ribosomal protein L24e family protein 0.83 0.32 -0.32
65 AT2G45710 Zinc-binding ribosomal protein family protein 0.83 0.33 -0.33
66 AT3G53740 Ribosomal protein L36e family protein 0.83 0.29 -0.31
67 AT3G53430 Ribosomal protein L11 family protein 0.83 0.29 -0.31
68 AT3G11510 Ribosomal protein S11 family protein 0.83 0.32 -0.29
69 AT2G46230 PIN domain-like family protein 0.83 0.3 -0.31
70 AT4G33865 Ribosomal protein S14p/S29e family protein 0.83 0.29 -0.33
71 AT2G34480 Ribosomal protein L18ae/LX family protein 0.83 0.32 -0.31
72 AT3G02080 Ribosomal protein S19e family protein 0.83 0.3 -0.32
73 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.83 0.32 -0.3
74 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.83 0.32 -0.31
75 AT5G06360 Ribosomal protein S8e family protein 0.82 0.31 -0.31
76 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.82 0.3 -0.31
77 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.82 0.32 -0.32
78 AT5G05990 Mitochondrial glycoprotein family protein 0.82 0.31 -0.33
79 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.82 0.31 -0.32
80 AT1G01100 60S acidic ribosomal protein family 0.82 0.34 -0.3
81 AT5G02450 Ribosomal protein L36e family protein 0.82 0.32 -0.33
82 AT1G26740 Ribosomal L32p protein family 0.82 0.33 -0.3
83 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.82 0.32 -0.33
84 AT3G16940 calmodulin binding;transcription regulators -0.81 0.31 -0.32
85 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.81 0.33 -0.33
86 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11		 0.81 0.31 -0.3
87 AT5G22440 Ribosomal protein L1p/L10e family 0.81 0.32 -0.29
88 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.81 0.32 -0.32
89 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.81 0.3 -0.31
90 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.33 -0.31
91 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.81 0.31 -0.32
92 AT3G62940 Cysteine proteinases superfamily protein 0.81 0.32 -0.3
93 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.32 -0.3
94 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.33 -0.34
95 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.78 0.3 -0.32
96 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.77 0.31 -0.3
97 AT3G24740 Protein of unknown function (DUF1644) -0.76 0.33 -0.33
98 AT4G38350 Patched family protein -0.73 0.31 -0.29
99 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.72 0.32 -0.33
100 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.72 0.32 -0.31
101 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.71 0.32 -0.3
102 AT1G51340 MATE efflux family protein -0.71 0.31 -0.33
103 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.71 0.32 -0.32
104 AT5G22850 Eukaryotic aspartyl protease family protein -0.7 0.31 -0.32
105 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.7 0.33 -0.31
106 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.7 0.31 -0.32
107 AT3G08020 PHD finger family protein -0.7 0.31 -0.3
108 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.69 0.28 -0.31
109 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.29 -0.32
110 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.68 0.3 -0.33
111 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.68 0.31 -0.31
112 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.3 -0.32
113 AT3G26730 RING/U-box superfamily protein -0.66 0.31 -0.31
114 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.66 0.3 -0.32
115 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.31
116 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.65 0.31 -0.32
117 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.65 0.31 -0.3
118 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.65 0.3 -0.31
119 AT5G39910 Pectin lyase-like superfamily protein -0.64 0.29 -0.32
120 AT4G26180 Mitochondrial substrate carrier family protein -0.64 0.35 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.8 0.32 -0.3 C0260
122 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.75 0.32 -0.31 C0257
123 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.74 0.32 -0.31 C0137
124 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.72 0.35 -0.33 C0054
125 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.66 0.43 -0.44 C0032
126 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.66 0.32 -0.3 C0052
127 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.65 0.32 -0.31 C0097