AT5G57160 : ATLIG4
Query Information
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AGICode AT5G57160
Description DNA ligase IV
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G57160 DNA ligase IV ATLIG4, DNA LIGASE IV 1 0.31 -0.3
2 AT3G62020 germin-like protein 10 germin-like protein 10 -0.75 0.32 -0.3
3 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.73 0.31 -0.34
4 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.73 0.31 -0.3
5 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.72 0.32 -0.3
6 AT5G51890 Peroxidase superfamily protein -0.71 0.31 -0.3
7 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.7 0.34 -0.32
8 AT2G20770 GCR2-like 2 GCR2-like 2 -0.7 0.33 -0.32
9 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.69 0.32 -0.3
10 AT3G27170 chloride channel B ATCLC-B, chloride channel B 0.68 0.3 -0.31
11 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.67 0.3 -0.33
12 AT1G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to
9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.3 -0.34
13 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 -0.65 0.32 -0.31
14 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 0.65 0.33 -0.29
15 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.64 0.34 -0.31
16 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.64 0.31 -0.32
17 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.3 -0.33
18 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.31 -0.32
19 AT5G60020 laccase 17 ATLAC17, laccase 17 -0.63 0.32 -0.32
20 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 0.63 0.3 -0.28
21 AT5G03260 laccase 11 laccase 11 -0.63 0.32 -0.3
22 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.62 0.32 -0.31
23 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.3 -0.31
24 AT3G16920 chitinase-like protein 2 ATCTL2, chitinase-like protein 2 -0.61 0.32 -0.32
25 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.61 0.32 -0.3
26 AT5G09380 RNA polymerase III RPC4 0.61 0.33 -0.3
27 AT1G07080 Thioredoxin superfamily protein -0.61 0.32 -0.3
28 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.61 0.3 -0.34
29 AT2G27660 Cysteine/Histidine-rich C1 domain family protein 0.61 0.33 -0.31
30 AT2G25780 Protein of unknown function (DUF1677) 0.6 0.32 -0.33
31 AT3G49400 Transducin/WD40 repeat-like superfamily protein 0.59 0.34 -0.32
32 AT4G29630 Cytidine/deoxycytidylate deaminase family protein 0.59 0.31 -0.29
33 AT3G10960 AZA-guanine resistant1 AZA-guanine resistant1,
AZA-guanine resistant1		 -0.59 0.33 -0.32
34 AT3G20280 RING/FYVE/PHD zinc finger superfamily protein 0.59 0.31 -0.32
35 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 -0.59 0.34 -0.32
36 AT4G07640 transposable element gene 0.59 0.34 -0.33
37 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.58 0.31 -0.32
38 AT1G04660 glycine-rich protein -0.58 0.3 -0.3
39 AT1G03920 Protein kinase family protein -0.58 0.32 -0.3
40 AT1G61400 S-locus lectin protein kinase family protein 0.57 0.31 -0.31
41 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.3 -0.31
42 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.57 0.3 -0.32
43 AT1G26920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits
to 47 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 -0.57 0.32 -0.32
44 AT1G15350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits
to 148 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.57 0.33 -0.32
45 AT2G23890 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0.57 0.32 -0.31
46 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 -0.57 0.3 -0.3
47 AT1G64480 calcineurin B-like protein 8 calcineurin B-like protein 8 0.57 0.31 -0.31
48 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.56 0.33 -0.32
49 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein -0.56 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.67 0.31 -0.31 C0092