AT5G56870 : beta-galactosidase 4
Query Information
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AGICode AT5G56870
Description beta-galactosidase 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 1 0.28 -0.31
2 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 0.82 0.31 -0.33
3 AT3G62930 Thioredoxin superfamily protein 0.8 0.32 -0.34
4 AT3G15630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast
hits to 61 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.32 -0.33
5 AT4G33040 Thioredoxin superfamily protein -0.76 0.32 -0.32
6 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.74 0.34 -0.33
7 AT5G49360 beta-xylosidase 1 BETA-XYLOSIDASE 1, beta-xylosidase
1		 0.73 0.31 -0.3
8 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.72 0.3 -0.32
9 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 -0.72 0.29 -0.33
10 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 0.72 0.32 -0.3
11 AT5G04770 cationic amino acid transporter 6 ARABIDOPSIS THALIANA CATIONIC
AMINO ACID TRANSPORTER 6, cationic
amino acid transporter 6		 0.72 0.31 -0.31
12 AT3G62860 alpha/beta-Hydrolases superfamily protein 0.72 0.32 -0.3
13 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 -0.71 0.3 -0.29
14 AT5G64170 dentin sialophosphoprotein-related -0.71 0.32 -0.33
15 AT5G65890 ACT domain repeat 1 ACT domain repeat 1 -0.71 0.32 -0.32
16 AT3G49790 Carbohydrate-binding protein 0.7 0.3 -0.3
17 AT4G03400 Auxin-responsive GH3 family protein DWARF IN LIGHT 2, GH3-10 -0.7 0.34 -0.3
18 AT1G32900 UDP-Glycosyltransferase superfamily protein granule bound starch synthase 1 -0.7 0.32 -0.32
19 AT1G55680 Transducin/WD40 repeat-like superfamily protein -0.69 0.32 -0.31
20 AT5G24810 ABC1 family protein -0.69 0.31 -0.31
21 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 0.69 0.29 -0.31
22 AT2G40840 disproportionating enzyme 2 disproportionating enzyme 2 -0.69 0.3 -0.32
23 AT4G15680 Thioredoxin superfamily protein 0.69 0.34 -0.32
24 AT5G58090 O-Glycosyl hydrolases family 17 protein 0.69 0.32 -0.31
25 AT4G37760 squalene epoxidase 3 squalene epoxidase 3 -0.69 0.29 -0.32
26 AT3G04030 Homeodomain-like superfamily protein -0.68 0.31 -0.31
27 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.68 0.31 -0.31
28 AT5G48880 peroxisomal 3-keto-acyl-CoA thiolase 2 3-KETO-ACYL-COENZYME A THIOLASE 5,
PEROXISOMAL-3-KETO-ACYL-COA
THIOLASE 1, peroxisomal
3-keto-acyl-CoA thiolase 2		 -0.68 0.3 -0.31
29 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 -0.68 0.33 -0.32
30 AT3G26610 Pectin lyase-like superfamily protein 0.68 0.31 -0.32
31 AT5G51770 Protein kinase superfamily protein -0.67 0.31 -0.32
32 AT4G34100 RING/U-box superfamily protein -0.67 0.31 -0.3
33 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 0.67 0.32 -0.34
34 AT2G31810 ACT domain-containing small subunit of acetolactate
synthase protein		 0.67 0.33 -0.31
35 AT3G13590 Cysteine/Histidine-rich C1 domain family protein -0.67 0.28 -0.32
36 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 0.67 0.31 -0.31
37 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.67 0.29 -0.3
38 AT3G21560 UDP-Glycosyltransferase superfamily protein UGT84A2 -0.66 0.32 -0.32
39 AT5G59150 RAB GTPase homolog A2D ARABIDOPSIS RAB GTPASE HOMOLOG
A2D, RAB GTPase homolog A2D, RAB
GTPase homolog A2D		 0.66 0.31 -0.32
40 AT4G18130 phytochrome E phytochrome E -0.66 0.3 -0.3
41 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1		 -0.66 0.3 -0.3
42 AT1G23870 trehalose-phosphatase/synthase 9 trehalose-phosphatase/synthase 9,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S9, trehalose-phosphatase/synthase
9		 0.66 0.33 -0.31
43 AT4G19420 Pectinacetylesterase family protein 0.66 0.34 -0.32
44 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 0.66 0.3 -0.32
45 AT1G69610 Protein of unknown function (DUF1666) -0.65 0.3 -0.31
46 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 -0.65 0.33 -0.31
47 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 -0.65 0.32 -0.31
48 AT5G50800 Nodulin MtN3 family protein AtSWEET13, SWEET13 -0.65 0.31 -0.29
49 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.65 0.31 -0.33
50 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.65 0.33 -0.33
51 AT2G01330 nucleotide binding -0.64 0.3 -0.3
52 AT4G02420 Concanavalin A-like lectin protein kinase family protein -0.64 0.31 -0.32
53 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.64 0.33 -0.3
54 AT1G67360 Rubber elongation factor protein (REF) -0.64 0.32 -0.33
55 AT4G15690 Thioredoxin superfamily protein 0.64 0.33 -0.32
56 AT2G43500 Plant regulator RWP-RK family protein -0.64 0.29 -0.32
57 AT4G25835 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.3 -0.31
58 AT5G01260 Carbohydrate-binding-like fold -0.64 0.34 -0.3
59 AT1G25550 myb-like transcription factor family protein 0.64 0.31 -0.31
60 AT3G60550 cyclin p3;2 cyclin p3;2 0.64 0.31 -0.32
61 AT2G43760 molybdopterin biosynthesis MoaE family protein 0.63 0.32 -0.32
62 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.63 0.3 -0.33
63 AT1G34340 alpha/beta-Hydrolases superfamily protein -0.63 0.32 -0.3
64 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 -0.63 0.32 -0.3
65 AT5G05460 Glycosyl hydrolase family 85 AtENGase85A,
Endo-beta-N-acetyglucosaminidase
85A		 0.63 0.3 -0.33
66 AT5G14120 Major facilitator superfamily protein 0.63 0.32 -0.32
67 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 -0.63 0.32 -0.31
68 AT1G07180 alternative NAD(P)H dehydrogenase 1 ARABIDOPSIS THALIANA INTERNAL
NON-PHOSPHORYLATING NAD ( P ) H
DEHYDROGENASE, alternative
NAD(P)H dehydrogenase 1		 -0.63 0.3 -0.28
69 AT3G22750 Protein kinase superfamily protein 0.63 0.3 -0.31
70 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.63 0.29 -0.31
71 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.63 0.32 -0.31
72 AT2G04880 zinc-dependent activator protein-1 ATWRKY1, WRKY1, zinc-dependent
activator protein-1		 -0.62 0.3 -0.31
73 AT3G13810 indeterminate(ID)-domain 11 indeterminate(ID)-domain 11,
indeterminate(ID)-domain 11		 -0.62 0.3 -0.31
74 AT2G21340 MATE efflux family protein -0.62 0.32 -0.32
75 AT3G47295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.3 -0.32
76 AT3G18040 MAP kinase 9 MAP kinase 9 -0.62 0.31 -0.32
77 AT5G22760 PHD finger family protein -0.62 0.31 -0.3
78 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 0.62 0.32 -0.31
79 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 -0.62 0.34 -0.33
80 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 0.62 0.32 -0.31
81 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 0.62 0.32 -0.32
82 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.61 0.32 -0.31
83 AT2G26770 plectin-related stomatal closure-related actin
binding protein 1		 -0.61 0.32 -0.33
84 AT3G05620 Plant invertase/pectin methylesterase inhibitor superfamily -0.61 0.3 -0.31
85 AT1G01640 BTB/POZ domain-containing protein 0.61 0.32 -0.3
86 AT2G27950 Ring/U-Box superfamily protein -0.61 0.29 -0.31
87 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 -0.61 0.3 -0.33
88 AT4G40060 homeobox protein 16 ATHB-16, homeobox protein 16,
homeobox protein 16		 0.61 0.32 -0.31
89 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 0.61 0.32 -0.31
90 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 -0.61 0.3 -0.33
91 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 -0.61 0.32 -0.31
92 AT5G43520 Cysteine/Histidine-rich C1 domain family protein 0.61 0.31 -0.31
93 AT2G16070 plastid division2 PLASTID DIVISION2 -0.61 0.33 -0.34
94 AT3G04870 zeta-carotene desaturase PIGMENT DEFECTIVE EMBRYO 181,
SPONTANEOUS CELL DEATH 1,
zeta-carotene desaturase		 -0.61 0.3 -0.35
95 AT1G78070 Transducin/WD40 repeat-like superfamily protein -0.61 0.33 -0.31
96 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 0.6 0.3 -0.31
97 AT5G55780 Cysteine/Histidine-rich C1 domain family protein 0.6 0.32 -0.33
98 AT5G17450 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 21		 -0.6 0.31 -0.31
99 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.31 -0.32
100 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 0.6 0.32 -0.29
101 AT5G24620 Pathogenesis-related thaumatin superfamily protein -0.6 0.31 -0.33
102 AT3G51250 Senescence/dehydration-associated protein-related -0.59 0.33 -0.33
103 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) -0.59 0.32 -0.34
104 AT4G08690 Sec14p-like phosphatidylinositol transfer family protein 0.59 0.3 -0.3
105 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 -0.59 0.29 -0.31
106 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 -0.59 0.3 -0.31
107 AT2G21320 B-box zinc finger family protein -0.59 0.33 -0.3
108 AT3G47500 cycling DOF factor 3 cycling DOF factor 3 -0.59 0.32 -0.35
109 AT1G30370 alpha/beta-Hydrolases superfamily protein DAD1-like acylhydrolase 0.59 0.33 -0.32
110 AT4G18340 Glycosyl hydrolase superfamily protein 0.58 0.32 -0.3
111 AT1G78090 trehalose-6-phosphate phosphatase Arabidopsis thaliana
trehalose-6-phosphate phosphatase
B, trehalose-6-phosphate
phosphatase B		 0.57 0.33 -0.31
112 AT1G19380 Protein of unknown function (DUF1195) 0.57 0.31 -0.29
113 AT3G06080 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 10 0.57 0.32 -0.32
114 AT3G20110 cytochrome P450, family 705, subfamily A, polypeptide 20 cytochrome P450, family 705,
subfamily A, polypeptide 20		 0.57 0.32 -0.32
115 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 0.57 0.32 -0.32
116 AT3G20710 F-box family protein 0.57 0.33 -0.3
117 AT1G72950 Disease resistance protein (TIR-NBS class) 0.56 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.7 0.32 -0.32 C0092
119 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.67 0.29 -0.32 C0098
120 C0168 MST_2023.2 - - - -0.64 0.48 -0.43