AGICode | AT5G56130 |
Description | Transducin/WD40 repeat-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G56130 | Transducin/WD40 repeat-like superfamily protein | AtTEX1, TEX1, THO3 | 1 | 0.33 | -0.3 | ||
2 | AT3G19760 | eukaryotic initiation factor 4A-III | eukaryotic initiation factor 4A-III |
0.81 | 0.33 | -0.32 | ||
3 | AT2G36670 | Eukaryotic aspartyl protease family protein | -0.79 | 0.32 | -0.29 | |||
4 | AT4G01370 | MAP kinase 4 | MAP kinase 4, MAP kinase 4 | 0.78 | 0.3 | -0.33 | ||
5 | AT1G32410 | Vacuolar protein sorting 55 (VPS55) family protein | 0.77 | 0.31 | -0.31 | |||
6 | AT3G47670 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.77 | 0.31 | -0.32 | |||
7 | AT3G19980 | flower-specific, phytochrome-associated protein phosphatase 3 |
flower-specific, phytochrome-associated protein phosphatase 3, EMBRYO DEFECTIVE 2736, flower-specific, phytochrome-associated protein phosphatase 3, SERINE/THREONINE PROTEIN PHOSPHATASE |
0.77 | 0.32 | -0.33 | ||
8 | AT1G03350 | BSD domain-containing protein | 0.76 | 0.31 | -0.31 | |||
9 | AT2G29700 | pleckstrin homologue 1 | pleckstrin homologue 1, pleckstrin homologue 1 |
0.76 | 0.31 | -0.31 | ||
10 | AT1G72340 | NagB/RpiA/CoA transferase-like superfamily protein | 0.76 | 0.32 | -0.31 | |||
11 | AT3G04830 | Protein prenylyltransferase superfamily protein | 0.75 | 0.3 | -0.31 | |||
12 | AT1G48900 | Signal recognition particle, SRP54 subunit protein | 0.75 | 0.31 | -0.31 | |||
13 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | 0.75 | 0.31 | -0.31 | ||
14 | AT3G07300 | NagB/RpiA/CoA transferase-like superfamily protein | 0.74 | 0.31 | -0.33 | |||
15 | AT2G31360 | 16:0delta9 desaturase 2 | 16:0delta9 desaturase 2, 16:0delta9 desaturase 2 |
0.73 | 0.33 | -0.31 | ||
16 | AT2G35990 | Putative lysine decarboxylase family protein | LONELY GUY 2 | 0.73 | 0.32 | -0.3 | ||
17 | AT5G19050 | alpha/beta-Hydrolases superfamily protein | 0.73 | 0.32 | -0.32 | |||
18 | AT1G04690 | potassium channel beta subunit 1 | potassium channel beta subunit 1, KV-BETA1 |
0.73 | 0.31 | -0.31 | ||
19 | AT3G07170 | Sterile alpha motif (SAM) domain-containing protein | 0.73 | 0.3 | -0.29 | |||
20 | AT1G15370 | SNARE-like superfamily protein | 0.73 | 0.31 | -0.31 | |||
21 | AT5G55610 | unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.73 | 0.3 | -0.32 | |||
22 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.73 | 0.3 | -0.3 | ||
23 | AT3G48490 | unknown protein; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.73 | 0.32 | -0.3 | |||
24 | AT4G17430 | O-fucosyltransferase family protein | 0.72 | 0.33 | -0.29 | |||
25 | AT1G71750 | Hypoxanthine-guanine phosphoribosyltransferase | Hypoxanthine-guanine phosphoribosyltransferase |
0.72 | 0.32 | -0.31 | ||
26 | AT1G71900 | Protein of unknown function (DUF803) | 0.72 | 0.33 | -0.3 | |||
27 | AT5G52050 | MATE efflux family protein | -0.72 | 0.29 | -0.31 | |||
28 | AT4G12230 | alpha/beta-Hydrolases superfamily protein | 0.72 | 0.3 | -0.34 | |||
29 | AT2G44610 | Ras-related small GTP-binding family protein | ATRAB6A, ATRABH1B, RAB6, RAB6A | 0.72 | 0.31 | -0.31 | ||
30 | AT4G29830 | Transducin/WD40 repeat-like superfamily protein | vernalization independence 3 | 0.71 | 0.31 | -0.31 | ||
31 | AT5G13670 | nodulin MtN21 /EamA-like transporter family protein | -0.71 | 0.33 | -0.32 | |||
32 | AT1G05270 | TraB family protein | 0.71 | 0.33 | -0.33 | |||
33 | AT1G07360 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5A | 0.71 | 0.33 | -0.28 | ||
34 | AT4G17640 | casein kinase II beta chain 2 | casein kinase II beta chain 2 | 0.71 | 0.31 | -0.32 | ||
35 | AT3G52220 | CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). |
0.7 | 0.32 | -0.32 | |||
36 | AT1G54720 | early-responsive to dehydration protein-related / ERD protein-related |
-0.7 | 0.32 | -0.31 | |||
37 | AT5G53000 | 2A phosphatase associated protein of 46 kD | 2A phosphatase associated protein of 46 kD |
0.7 | 0.33 | -0.32 | ||
38 | AT5G46860 | Syntaxin/t-SNARE family protein | ARABIDOPSIS THALIANA SYNTAXIN OF PLANTS 22, ARABIDOPSIS THALIANA VACUOLAR MORPHOLOGY 3, SHOOT GRAVITROPISM 3, SYNTAXIN OF PLANTS 22, VACUOLAR MORPHOLOGY 3 |
0.7 | 0.35 | -0.33 | ||
39 | AT5G11150 | vesicle-associated membrane protein 713 | vesicle-associated membrane protein 713, VAMP713, vesicle-associated membrane protein 713 |
0.7 | 0.32 | -0.32 | ||
40 | AT3G15710 | Peptidase S24/S26A/S26B/S26C family protein | 0.7 | 0.31 | -0.3 | |||
41 | AT2G30620 | winged-helix DNA-binding transcription factor family protein |
0.69 | 0.31 | -0.32 | |||
42 | AT2G17230 | EXORDIUM like 5 | EXORDIUM like 5 | 0.69 | 0.31 | -0.31 | ||
43 | AT3G53340 | nuclear factor Y, subunit B10 | nuclear factor Y, subunit B10 | 0.69 | 0.31 | -0.33 | ||
44 | AT5G62880 | RAC-like 10 | RAC-like 10, ARABIDOPSIS THALIANA RAC-LIKE 10, RHO-RELATED PROTEIN FROM PLANTS 11, RAC-like 10, RHO-related protein from plants 11 |
0.69 | 0.32 | -0.32 | ||
45 | AT3G57340 | Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) |
0.69 | 0.32 | -0.33 | |||
46 | AT3G08630 | Protein of unknown function (DUF3411) | 0.69 | 0.31 | -0.31 | |||
47 | AT1G55200 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.68 | 0.31 | -0.29 | |||
48 | AT1G67710 | response regulator 11 | response regulator 11 | -0.68 | 0.32 | -0.32 | ||
49 | AT3G55440 | triosephosphate isomerase | CYTOSOLIC TRIOSE PHOSPHATE ISOMERASE, CYTOSOLIC ISOFORM TRIOSE PHOSPHATE ISOMERASE, triosephosphate isomerase |
0.68 | 0.3 | -0.3 | ||
50 | AT2G24970 | unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.68 | 0.29 | -0.31 | |||
51 | AT5G09920 | RNA polymerase II, Rpb4, core protein | ATRPB15.9, NRPB4, RPB15.9, RPB15.9.9 |
0.68 | 0.33 | -0.31 | ||
52 | AT3G59810 | Small nuclear ribonucleoprotein family protein | 0.68 | 0.32 | -0.31 | |||
53 | AT5G59910 | Histone superfamily protein | HTB4 | 0.68 | 0.29 | -0.3 | ||
54 | AT4G34050 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
caffeoyl coenzyme A O-methyltransferase 1 |
0.67 | 0.32 | -0.3 | ||
55 | AT5G17690 | like heterochromatin protein (LHP1) | AtLHP1, LIKE HETEROCHROMATIN PROTEIN 1, TERMINAL FLOWER 2 |
-0.67 | 0.31 | -0.31 | ||
56 | AT5G49945 | Protein of unknown function (DUF1682) | 0.67 | 0.3 | -0.31 | |||
57 | AT1G79780 | Uncharacterised protein family (UPF0497) | -0.67 | 0.33 | -0.31 | |||
58 | AT1G67620 | Lojap-related protein | 0.67 | 0.3 | -0.29 | |||
59 | AT1G05350 | NAD(P)-binding Rossmann-fold superfamily protein | 0.67 | 0.33 | -0.33 | |||
60 | AT1G10900 | Phosphatidylinositol-4-phosphate 5-kinase family protein | -0.67 | 0.31 | -0.32 | |||
61 | AT5G41320 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.67 | 0.34 | -0.32 | |||
62 | AT2G16600 | rotamase CYP 3 | rotamase CYP 3 | 0.67 | 0.29 | -0.31 | ||
63 | AT4G14230 | CBS domain-containing protein with a domain of unknown function (DUF21) |
0.67 | 0.3 | -0.3 | |||
64 | AT1G77850 | auxin response factor 17 | auxin response factor 17 | 0.67 | 0.33 | -0.31 | ||
65 | AT1G05070 | Protein of unknown function (DUF1068) | 0.67 | 0.31 | -0.35 | |||
66 | AT1G43260 | hAT transposon superfamily protein | -0.67 | 0.32 | -0.31 | |||
67 | AT5G25360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.33 | -0.33 | |||
68 | AT2G04410 | RPM1-interacting protein 4 (RIN4) family protein | 0.67 | 0.33 | -0.32 | |||
69 | AT2G44490 | Glycosyl hydrolase superfamily protein | BETA GLUCOSIDASE 26, PENETRATION 2 | 0.66 | 0.31 | -0.32 | ||
70 | AT3G58770 | unknown protein; Has 38 Blast hits to 36 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.66 | 0.34 | -0.33 | |||
71 | AT1G24330 | ARM repeat superfamily protein | -0.66 | 0.31 | -0.3 | |||
72 | AT2G23080 | Protein kinase superfamily protein | casein kinase II, alpha chain 3 | 0.66 | 0.32 | -0.31 | ||
73 | AT5G45200 | Disease resistance protein (TIR-NBS-LRR class) family | -0.66 | 0.3 | -0.3 | |||
74 | AT4G31070 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.66 | 0.3 | -0.32 | |||
75 | AT2G06820 | transposable element gene | -0.65 | 0.3 | -0.32 | |||
76 | AT1G65270 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 149 Blast hits to 149 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.65 | 0.32 | -0.3 | |||
77 | AT3G62230 | F-box family protein | DUO1-activated F-box 1 | 0.65 | 0.3 | -0.31 | ||
78 | AT4G05000 | Vacuolar protein sorting-associated protein VPS28 family protein |
vacuolar protein sorting-associated protein 28 homolog 1, VPS28-2 |
0.65 | 0.32 | -0.32 | ||
79 | AT4G35335 | Nucleotide-sugar transporter family protein | 0.65 | 0.33 | -0.33 | |||
80 | AT5G37620 | Cysteine/Histidine-rich C1 domain family protein | -0.65 | 0.29 | -0.32 | |||
81 | AT2G10400 | transposable element gene | 0.65 | 0.33 | -0.34 | |||
82 | AT3G13720 | PRA1 (Prenylated rab acceptor) family protein | PRENYLATED RAB ACCEPTOR 1.F3, PRA8 | 0.65 | 0.31 | -0.32 | ||
83 | AT5G33380 | transposable element gene | 0.65 | 0.3 | -0.33 | |||
84 | AT5G09890 | Protein kinase family protein | 0.65 | 0.33 | -0.3 | |||
85 | AT3G04020 | unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.65 | 0.32 | -0.32 | |||
86 | AT5G15020 | SIN3-like 2 | SIN3-like 2 | -0.65 | 0.32 | -0.31 | ||
87 | AT4G39730 | Lipase/lipooxygenase, PLAT/LH2 family protein | 0.65 | 0.33 | -0.32 | |||
88 | AT2G38670 | phosphorylethanolamine cytidylyltransferase 1 | phosphorylethanolamine cytidylyltransferase 1 |
0.65 | 0.32 | -0.31 | ||
89 | AT1G15470 | Transducin/WD40 repeat-like superfamily protein | 0.65 | 0.3 | -0.31 | |||
90 | AT4G12920 | Eukaryotic aspartyl protease family protein | UNDEAD | -0.64 | 0.29 | -0.31 | ||
91 | AT1G66960 | Terpenoid cyclases family protein | LUP5 | -0.64 | 0.32 | -0.31 | ||
92 | AT1G06490 | glucan synthase-like 7 | Arabidopsis thaliana glucan synthase-like 7, atgsl7, callose synthase 7, gsl07, glucan synthase-like 7, glucan synthase-like 7 |
-0.63 | 0.3 | -0.31 | ||
93 | AT1G28135 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.31 | -0.31 | |||
94 | AT5G08210 | MIR834a; miRNA | microRNA834A | -0.63 | 0.31 | -0.3 | ||
95 | AT5G49350 | Glycine-rich protein family | -0.63 | 0.3 | -0.31 | |||
96 | AT1G68090 | annexin 5 | annexin 5, ANNEXIN ARABIDOPSIS THALIANA 5 |
-0.63 | 0.34 | -0.33 | ||
97 | AT3G42070 | transposable element gene | -0.63 | 0.32 | -0.31 | |||
98 | AT5G54350 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.63 | 0.32 | -0.32 | |||
99 | AT2G22760 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.63 | 0.31 | -0.29 | |||
100 | AT2G17110 | Protein of unknown function (DUF630 and DUF632) | -0.62 | 0.29 | -0.31 | |||
101 | AT5G05260 | cytochrome p450 79a2 | cytochrome p450 79a2 | -0.62 | 0.33 | -0.32 | ||
102 | AT1G34140 | poly(A) binding protein 1 | poly(A) binding protein 1 | -0.62 | 0.32 | -0.32 | ||
103 | AT2G35460 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.62 | 0.32 | -0.31 | |||
104 | AT1G59950 | NAD(P)-linked oxidoreductase superfamily protein | -0.62 | 0.32 | -0.3 | |||
105 | AT1G37150 | holocarboxylase synthetase 2 | holocarboxylase synthetase 2 | -0.61 | 0.31 | -0.34 | ||
106 | AT4G33130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.61 | 0.32 | -0.31 | |||
107 | AT5G25290 | F-box family protein with a domain of unknown function (DUF295) |
-0.61 | 0.29 | -0.29 | |||
108 | AT1G79030 | Chaperone DnaJ-domain superfamily protein | -0.6 | 0.32 | -0.31 | |||
109 | AT2G44900 | ARABIDILLO-1 | ARABIDILLO-1, F-box Armadillo protein 1 |
-0.6 | 0.34 | -0.32 | ||
110 | AT1G26260 | cryptochrome-interacting basic-helix-loop-helix 5 | cryptochrome-interacting basic-helix-loop-helix 5 |
-0.6 | 0.32 | -0.3 | ||
111 | AT2G17845 | NAD(P)-binding Rossmann-fold superfamily protein | -0.6 | 0.32 | -0.33 | |||
112 | AT3G53090 | ubiquitin-protein ligase 7 | ubiquitin-protein ligase 7 | -0.59 | 0.29 | -0.32 | ||
113 | AT2G34710 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
ATHB-14, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 14, PHABULOSA, PHABULOSA 1D |
-0.59 | 0.32 | -0.31 | ||
114 | AT2G46590 | Dof-type zinc finger DNA-binding family protein | DOF AFFECTING GERMINATION 2 | -0.59 | 0.32 | -0.3 | ||
115 | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
-0.59 | 0.33 | -0.33 | |||
116 | AT5G25520 | SPOC domain / Transcription elongation factor S-II protein | -0.59 | 0.34 | -0.32 | |||
117 | AT5G44350 | ethylene-responsive nuclear protein -related | -0.59 | 0.33 | -0.31 | |||
118 | AT1G42460 | transposable element gene | -0.59 | 0.33 | -0.33 | |||
119 | AT1G66550 | WRKY DNA-binding protein 67 | ATWRKY67, WRKY DNA-binding protein 67 |
-0.58 | 0.31 | -0.31 | ||
120 | AT5G30470 | transposable element gene | -0.58 | 0.33 | -0.33 | |||
121 | AT3G14570 | glucan synthase-like 4 | glucan synthase-like 4, atgsl4, gsl04, glucan synthase-like 4 |
-0.58 | 0.3 | -0.32 | ||
122 | AT3G25840 | Protein kinase superfamily protein | -0.58 | 0.32 | -0.32 | |||
123 | AT3G04420 | NAC domain containing protein 48 | NAC domain containing protein 48, NAC domain containing protein 48 |
-0.57 | 0.33 | -0.31 | ||
124 | AT1G12720 | transposable element gene | -0.57 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
125 | C0212 | PR_MST_2336.8 | - | - | - | -0.59 | 0.43 | -0.42 |