AT5G56380 : -
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AGICode AT5G56380
Description F-box/RNI-like/FBD-like domains-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G56380 F-box/RNI-like/FBD-like domains-containing protein 1 0.31 -0.28
2 AT1G73490 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.3 -0.33
3 AT5G51620 Uncharacterised protein family (UPF0172) 0.84 0.31 -0.32
4 AT5G44500 Small nuclear ribonucleoprotein family protein 0.78 0.29 -0.3
5 AT5G46510 Disease resistance protein (TIR-NBS-LRR class) family 0.75 0.3 -0.32
6 AT5G41700 ubiquitin conjugating enzyme 8 ARABIDOPSIS THALIANA UBIQUITIN
CONJUGATING ENZYME 8, ubiquitin
conjugating enzyme 8
0.74 0.31 -0.32
7 AT5G43740 Disease resistance protein (CC-NBS-LRR class) family 0.73 0.34 -0.31
8 AT5G59770 Protein-tyrosine phosphatase-like, PTPLA 0.72 0.32 -0.3
9 AT5G44580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G44582.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).
0.71 0.33 -0.32
10 AT5G47510 Sec14p-like phosphatidylinositol transfer family protein 0.71 0.32 -0.31
11 AT5G56910 Proteinase inhibitor I25, cystatin, conserved region 0.71 0.32 -0.32
12 AT1G15550 gibberellin 3-oxidase 1 ARABIDOPSIS THALIANA GIBBERELLIN 3
BETA-HYDROXYLASE 1, gibberellin
3-oxidase 1, GA REQUIRING 4
0.68 0.33 -0.3
13 AT5G43270 squamosa promoter binding protein-like 2 squamosa promoter binding
protein-like 2
0.68 0.35 -0.33
14 AT5G58980 Neutral/alkaline non-lysosomal ceramidase 0.66 0.3 -0.31
15 AT5G42990 ubiquitin-conjugating enzyme 18 ubiquitin-conjugating enzyme 18 0.66 0.32 -0.31
16 AT5G53150 DNAJ heat shock N-terminal domain-containing protein 0.65 0.32 -0.32
17 AT5G42680 Protein of unknown function, DUF617 0.65 0.3 -0.3
18 AT5G56030 heat shock protein 81-2 HEAT SHOCK PROTEIN 90.2,
EARLY-RESPONSIVE TO DEHYDRATION 8,
heat shock protein 81-2, heat
shock protein 81.2, HEAT SHOCK
PROTEIN 90.2
0.65 0.31 -0.31
19 AT5G42250 Zinc-binding alcohol dehydrogenase family protein 0.64 0.32 -0.31
20 AT5G42090 Lung seven transmembrane receptor family protein 0.63 0.32 -0.32
21 AT5G47250 LRR and NB-ARC domains-containing disease resistance
protein
-0.63 0.32 -0.29
22 AT1G69400 Transducin/WD40 repeat-like superfamily protein 0.63 0.32 -0.32
23 AT5G40950 ribosomal protein large subunit 27 ribosomal protein large subunit 27 0.62 0.31 -0.3
24 AT5G40140 RING/U-box superfamily protein with ARM repeat domain 0.62 0.3 -0.29
25 AT1G75710 C2H2-like zinc finger protein 0.62 0.31 -0.32
26 AT5G48520 unknown protein; Has 609 Blast hits to 593 proteins in 129
species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi -
40; Plants - 64; Viruses - 0; Other Eukaryotes - 74
(source: NCBI BLink).
AtAUG3, augmin 3 0.62 0.32 -0.31
27 AT5G39030 Protein kinase superfamily protein 0.61 0.31 -0.33
28 AT2G24960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits
to 509 proteins in 26 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other
Eukaryotes - 50 (source: NCBI BLink).
-0.61 0.31 -0.3
29 AT5G60260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.6 0.32 -0.32
30 AT5G45940 nudix hydrolase homolog 11 Arabidopsis thaliana nudix
hydrolase homolog 11, Arabidopsis
thaliana nudix hydrolase homolog
11, nudix hydrolase homolog 11,
nudix hydrolase homolog 11
0.6 0.3 -0.33
31 AT5G60610 F-box/RNI-like superfamily protein -0.58 0.32 -0.3
32 AT1G72890 Disease resistance protein (TIR-NBS class) 0.58 0.32 -0.33
33 AT1G80960 F-box and Leucine Rich Repeat domains containing protein 0.57 0.34 -0.31
34 AT5G63760 RING/U-box superfamily protein ARIADNE 15, ARABIDOPSIS ARIADNE 15 0.57 0.32 -0.32
35 AT3G32140 transposable element gene 0.57 0.34 -0.31
36 AT5G58575 CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional
regulation (InterPro:IPR013246); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
-0.57 0.3 -0.29
37 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 0.56 0.33 -0.31
38 AT5G43500 actin-related protein 9 actin-related protein 9,
actin-related protein 9
0.55 0.31 -0.31
39 AT5G46630 Clathrin adaptor complexes medium subunit family protein 0.55 0.33 -0.32
40 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.54 0.32 -0.32
41 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3
-0.54 0.3 -0.31
42 AT5G54520 Transducin/WD40 repeat-like superfamily protein 0.54 0.32 -0.32
43 AT1G79960 ovate family protein 14 ATOFP14, ovate family protein 14 0.53 0.33 -0.31
44 AT5G48655 RING/U-box superfamily protein 0.53 0.29 -0.31
45 AT1G77590 long chain acyl-CoA synthetase 9 long chain acyl-CoA synthetase 9 -0.52 0.31 -0.33
46 AT4G16710 glycosyltransferase family protein 28 0.51 0.31 -0.32
47 AT5G51230 VEFS-Box of polycomb protein AtEMF2, CYR1, EMBRYONIC FLOWER 2,
CYTOKININ RESISTANT 1
0.51 0.31 -0.3
48 AT3G14350 STRUBBELIG-receptor family 7 STRUBBELIG-receptor family 7 0.51 0.33 -0.32
49 AT5G49000 Galactose oxidase/kelch repeat superfamily protein -0.49 0.3 -0.31
50 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein 0.49 0.32 -0.29
51 AT3G30720 qua-quine starch QUA-QUINE STARCH 0.48 0.31 -0.3
52 AT3G28400 transposable element gene 0.48 0.35 -0.33
53 AT5G36900 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).
-0.46 0.32 -0.34
54 AT5G48230 acetoacetyl-CoA thiolase 2 acetoacetyl-CoA thiolase 2, EMBRYO
DEFECTIVE 1276
-0.46 0.32 -0.3
55 AT2G03130 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein
0.46 0.31 -0.32
56 AT1G80900 magnesium transporter 1 MAGNESIUM TRANSPORTER 1, magnesium
transporter 1, MRS2-10
-0.45 0.32 -0.31
57 AT2G14410 pseudogene, hypothetical protein, similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)(SP:Q99323)
{Drosophila melanogaster}
-0.45 0.31 -0.31
58 AT5G59060 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).
0.45 0.29 -0.3
59 AT5G60335 Thioesterase superfamily protein 0.45 0.32 -0.31
60 AT5G54930 AT hook motif-containing protein -0.45 0.32 -0.3
61 AT2G34110 BEST Arabidopsis thaliana protein match is:
forkhead-associated (FHA) domain-containing protein
(TAIR:AT1G34355.1); Has 19 Blast hits to 19 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.44 0.33 -0.34
62 AT2G27320 Protein of Unknown Function (DUF239) -0.43 0.3 -0.31
63 AT3G05940 Protein of unknown function (DUF300) -0.43 0.32 -0.3
64 AT1G15360 Integrase-type DNA-binding superfamily protein SHINE 1, WAX INDUCER 1 -0.43 0.35 -0.32
65 AT5G55320 MBOAT (membrane bound O-acyl transferase) family protein -0.4 0.35 -0.3
66 AT5G64210 alternative oxidase 2 alternative oxidase 2 -0.39 0.28 -0.33
67 AT2G11940 transposable element gene -0.38 0.33 -0.31
68 ATMG01400 hypothetical protein ORF105B -0.38 0.3 -0.31