AGICode | AT5G56070 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G56070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.29 | -0.32 | |||
2 | AT5G44470 | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G23320.1); Has 74 Blast hits to 74 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.32 | -0.32 | |||
3 | AT3G49710 | Pentatricopeptide repeat (PPR) superfamily protein | -0.67 | 0.31 | -0.31 | |||
4 | AT3G62080 | SNF7 family protein | 0.65 | 0.31 | -0.3 | |||
5 | AT4G38090 | Ribosomal protein S5 domain 2-like superfamily protein | 0.64 | 0.31 | -0.3 | |||
6 | AT4G15460 | glycine-rich protein | -0.64 | 0.34 | -0.32 | |||
7 | AT1G23640 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.34 | -0.33 | |||
8 | AT1G42393 | transposable element gene | 0.63 | 0.32 | -0.32 | |||
9 | AT3G29796 | unknown protein; Has 28 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.62 | 0.31 | -0.3 | |||
10 | AT4G03740 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.3 | -0.34 | |||
11 | AT3G62230 | F-box family protein | DUO1-activated F-box 1 | 0.62 | 0.31 | -0.3 | ||
12 | AT2G29100 | glutamate receptor 2.9 | glutamate receptor 2.9, GLUTAMATE RECEPTOR 2.9, glutamate receptor 2.9 |
0.62 | 0.29 | -0.3 | ||
13 | AT2G11360 | transposable element gene | -0.61 | 0.33 | -0.29 | |||
14 | AT3G45320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60330.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.3 | -0.32 | |||
15 | AT2G02560 | cullin-associated and neddylation dissociated | CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1, cullin-associated and neddylation dissociated, ETA2, HEMIVENATA, TIP120 |
-0.61 | 0.31 | -0.31 | ||
16 | AT2G26970 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.61 | 0.3 | -0.3 | |||
17 | AT2G24330 | Protein of unknown function (DUF2296) | 0.61 | 0.32 | -0.33 | |||
18 | AT5G20200 | nucleoporin-related | -0.6 | 0.3 | -0.35 | |||
19 | AT4G04470 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | PMP22 | 0.6 | 0.31 | -0.33 | ||
20 | AT1G71692 | AGAMOUS-like 12 | AGAMOUS-like 12, XAANTAL1 | -0.6 | 0.31 | -0.32 | ||
21 | AT5G26130 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.6 | 0.33 | -0.29 | |||
22 | AT5G62610 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.6 | 0.32 | -0.28 | |||
23 | AT5G10870 | chorismate mutase 2 | chorismate mutase 2, chorismate mutase 2 |
0.59 | 0.32 | -0.33 | ||
24 | AT4G21340 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
B70 | -0.59 | 0.33 | -0.33 | ||
25 | AT1G69120 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 7, APETALA1 | -0.59 | 0.33 | -0.3 | ||
26 | AT3G10220 | tubulin folding cofactor B | EMBRYO DEFECTIVE 2804 | 0.59 | 0.29 | -0.33 | ||
27 | AT3G10400 | RNA recognition motif and CCHC-type zinc finger domains containing protein |
U11/U12-31K | 0.59 | 0.3 | -0.3 | ||
28 | AT3G43420 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.32 | -0.3 | |||
29 | AT1G26530 | PIN domain-like family protein | 0.58 | 0.29 | -0.34 | |||
30 | AT5G41960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.58 | 0.31 | -0.31 | |||
31 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.58 | 0.33 | -0.34 | ||
32 | AT2G36980 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.58 | 0.33 | -0.33 | |||
33 | AT4G10510 | Subtilase family protein | -0.58 | 0.33 | -0.31 | |||
34 | AT3G51690 | PIF1 helicase | 0.58 | 0.31 | -0.3 | |||
35 | AT4G20230 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.58 | 0.3 | -0.3 | |||
36 | AT2G18610 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.32 | |||
37 | AT1G50750 | Plant mobile domain protein family | 0.58 | 0.32 | -0.31 | |||
38 | AT4G10920 | transcriptional coactivator p15 (PC4) family protein (KELP) | KELP | 0.57 | 0.3 | -0.31 | ||
39 | ATMG00450 | hypothetical protein | ORF106B | 0.57 | 0.31 | -0.31 | ||
40 | AT3G21280 | ubiquitin-specific protease 7 | ubiquitin-specific protease 7 | 0.56 | 0.32 | -0.3 | ||
41 | AT4G14385 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.56 | 0.33 | -0.31 | |||
42 | AT1G68940 | Armadillo/beta-catenin-like repeat family protein | -0.56 | 0.29 | -0.3 | |||
43 | AT3G30370 | CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein (TAIR:AT1G18050.1); Has 35 Blast hits to 35 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.31 | -0.32 | |||
44 | AT3G66652 | fip1 motif-containing protein | -0.56 | 0.3 | -0.34 | |||
45 | AT2G15720 | transposable element gene | -0.56 | 0.32 | -0.35 | |||
46 | AT5G52360 | actin depolymerizing factor 10 | actin depolymerizing factor 10 | 0.56 | 0.31 | -0.32 | ||
47 | AT5G35670 | IQ-domain 33 | IQ-domain 33 | -0.55 | 0.31 | -0.3 | ||
48 | AT4G28420 | Tyrosine transaminase family protein | -0.55 | 0.3 | -0.31 | |||
49 | AT1G65450 | HXXXD-type acyl-transferase family protein | 0.55 | 0.33 | -0.33 | |||
50 | AT1G50140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.55 | 0.31 | -0.29 | |||
51 | AT1G27080 | nitrate transporter 1.6 | nitrate transporter 1.6 | -0.54 | 0.31 | -0.31 | ||
52 | AT5G14670 | ADP-ribosylation factor A1B | ADP-ribosylation factor A1B, ADP-ribosylation factor A1B |
-0.54 | 0.3 | -0.32 | ||
53 | AT4G11340 | Disease resistance protein (TIR-NBS-LRR class) family | -0.54 | 0.29 | -0.29 | |||
54 | AT2G30560 | glycine-rich protein | -0.54 | 0.32 | -0.32 | |||
55 | AT4G04170 | transposable element gene | 0.54 | 0.31 | -0.29 | |||
56 | AT5G58550 | ETO1-like 2 | ETO1-like 2 | -0.54 | 0.32 | -0.32 | ||
57 | AT5G15480 | C2H2-type zinc finger family protein | 0.54 | 0.33 | -0.31 | |||
58 | AT1G05880 | RING/U-box superfamily protein | ARIADNE 12, ARABIDOPSIS ARIADNE 12 | 0.54 | 0.32 | -0.31 | ||
59 | AT1G63590 | Receptor-like protein kinase-related family protein | 0.54 | 0.3 | -0.29 | |||
60 | AT2G18880 | vernalization5/VIN3-like | vernalization5/VIN3-like 2, VIN3-like 3 |
0.53 | 0.33 | -0.31 | ||
61 | AT1G69500 | cytochrome P450, family 704, subfamily B, polypeptide 1 | cytochrome P450, family 704, subfamily B, polypeptide 1 |
0.53 | 0.32 | -0.31 | ||
62 | AT1G50960 | gibberellin 2-oxidase 7 | ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 7, gibberellin 2-oxidase 7 |
0.53 | 0.31 | -0.31 | ||
63 | AT4G40050 | Protein of unknown function (DUF3550/UPF0682) | -0.53 | 0.33 | -0.33 | |||
64 | AT4G11930 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 102 Blast hits to 102 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.32 | -0.3 | |||
65 | AT1G47720 | Primosome PriB/single-strand DNA-binding | Organellar Single-stranded | -0.53 | 0.31 | -0.31 | ||
66 | AT5G65205 | NAD(P)-binding Rossmann-fold superfamily protein | 0.52 | 0.31 | -0.33 | |||
67 | AT4G09300 | LisH and RanBPM domains containing protein | 0.52 | 0.31 | -0.32 | |||
68 | AT5G24910 | cytochrome P450, family 714, subfamily A, polypeptide 1 | cytochrome P450, family 714, subfamily A, polypeptide 1, EUI-like p450 A1 |
-0.52 | 0.33 | -0.3 | ||
69 | AT4G37230 | Photosystem II manganese-stabilising protein (PsbO) family | -0.52 | 0.31 | -0.31 | |||
70 | AT5G24540 | beta glucosidase 31 | beta glucosidase 31 | 0.52 | 0.32 | -0.31 | ||
71 | AT3G05780 | lon protease 3 | lon protease 3 | -0.51 | 0.3 | -0.32 | ||
72 | AT5G60470 | C2H2 and C2HC zinc fingers superfamily protein | 0.51 | 0.31 | -0.31 | |||
73 | AT4G20270 | Leucine-rich receptor-like protein kinase family protein | BARELY ANY MERISTEM 3 | -0.51 | 0.32 | -0.32 | ||
74 | AT1G60380 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
0.51 | 0.31 | -0.29 | |||
75 | AT3G59390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
0.51 | 0.32 | -0.32 | |||
76 | AT5G28780 | PIF1 helicase | 0.51 | 0.31 | -0.32 | |||
77 | AT4G21240 | F-box and associated interaction domains-containing protein | -0.5 | 0.33 | -0.31 | |||
78 | AT2G27090 | Protein of unknown function (DUF630 and DUF632) | -0.5 | 0.3 | -0.32 | |||
79 | AT1G50380 | Prolyl oligopeptidase family protein | -0.5 | 0.33 | -0.35 | |||
80 | AT1G64780 | ammonium transporter 1;2 | ammonium transporter 1;2, ammonium transporter 1;2 |
-0.5 | 0.32 | -0.31 |