AT5G55540 : LOPPED 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G55540
Description tornado 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G55540 tornado 1 LOPPED 1, TORNADO 1 1 0.31 -0.3
2 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.86 0.31 -0.32
3 AT5G17380 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.83 0.31 -0.33
4 AT3G05470 Actin-binding FH2 (formin homology 2) family protein 0.83 0.32 -0.31
5 AT4G34220 Leucine-rich repeat protein kinase family protein 0.83 0.32 -0.33
6 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.82 0.3 -0.35
7 AT1G67040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.31
8 AT4G04890 protodermal factor 2 protodermal factor 2 0.81 0.31 -0.3
9 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 0.81 0.32 -0.3
10 AT3G22520 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast, chloroplast
envelope; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14840.1); Has 717 Blast
hits to 703 proteins in 179 species: Archae - 14; Bacteria
- 134; Metazoa - 141; Fungi - 74; Plants - 209; Viruses -
0; Other Eukaryotes - 145 (source: NCBI BLink).		 0.81 0.33 -0.34
11 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.81 0.31 -0.32
12 AT3G26932 dsRNA-binding protein 3 dsRNA-binding protein 3 0.8 0.33 -0.3
13 AT4G25900 Galactose mutarotase-like superfamily protein -0.79 0.31 -0.32
14 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).		 -0.79 0.31 -0.3
15 AT1G28440 HAESA-like 1 HAESA-like 1 0.79 0.31 -0.35
16 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component 0.79 0.28 -0.32
17 AT2G42840 protodermal factor 1 protodermal factor 1 0.78 0.31 -0.3
18 AT5G25590 Protein of unknown function (DUF630 and DUF632) 0.78 0.32 -0.29
19 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 -0.78 0.31 -0.33
20 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.78 0.32 -0.3
21 AT5G06750 Protein phosphatase 2C family protein -0.78 0.32 -0.29
22 AT2G47380 Cytochrome c oxidase subunit Vc family protein -0.77 0.33 -0.31
23 AT1G10850 Leucine-rich repeat protein kinase family protein 0.77 0.31 -0.32
24 AT4G19880 Glutathione S-transferase family protein -0.77 0.33 -0.32
25 AT1G77370 Glutaredoxin family protein -0.77 0.3 -0.32
26 AT3G27380 succinate dehydrogenase 2-1 succinate dehydrogenase 2-1 -0.77 0.31 -0.3
27 AT3G13510 Protein of Unknown Function (DUF239) 0.77 0.34 -0.3
28 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.77 0.33 -0.3
29 AT2G27040 Argonaute family protein ARGONAUTE 4, OVEREXPRESSOR OF
CATIONIC PEROXIDASE 11		 0.77 0.32 -0.34
30 AT4G35630 phosphoserine aminotransferase phosphoserine aminotransferase -0.77 0.31 -0.32
31 AT5G51560 Leucine-rich repeat protein kinase family protein 0.76 0.32 -0.29
32 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.76 0.31 -0.33
33 AT4G38540 FAD/NAD(P)-binding oxidoreductase family protein -0.76 0.32 -0.33
34 AT1G11600 cytochrome P450, family 77, subfamily B, polypeptide 1 cytochrome P450, family 77,
subfamily B, polypeptide 1		 0.76 0.31 -0.29
35 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.76 0.31 -0.32
36 AT5G16000 NSP-interacting kinase 1 NSP-interacting kinase 1 0.76 0.33 -0.32
37 AT2G45850 AT hook motif DNA-binding family protein 0.76 0.32 -0.33
38 AT5G01020 Protein kinase superfamily protein 0.76 0.3 -0.31
39 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein -0.76 0.34 -0.31
40 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 0.76 0.32 -0.32
41 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 0.75 0.31 -0.34
42 AT1G09300 Metallopeptidase M24 family protein -0.75 0.32 -0.3
43 AT3G59420 crinkly4 crinkly4, crinkly4 0.75 0.31 -0.33
44 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 -0.75 0.3 -0.33
45 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2		 -0.75 0.28 -0.3
46 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.74 0.33 -0.31
47 AT1G68890 magnesium ion binding;thiamin pyrophosphate
binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-
hydroxy-3-cyclohexene-1-carboxylic-acid synthases		 0.74 0.31 -0.32
48 AT5G26910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits
to 684 proteins in 162 species: Archae - 4; Bacteria - 497;
Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0;
Other Eukaryotes - 408 (source: NCBI BLink).		 0.74 0.3 -0.32
49 AT2G37630 myb-like HTH transcriptional regulator family protein ASYMMETRIC LEAVES 1, MYB DOMAIN
PROTEIN 91, ARABIDOPSIS
PHANTASTICA-LIKE 1, MYB DOMAIN
PROTEIN 91		 0.74 0.31 -0.37
50 AT3G60320 Protein of unknown function (DUF630 and DUF632) 0.74 0.31 -0.32
51 AT2G05790 O-Glycosyl hydrolases family 17 protein 0.74 0.31 -0.31
52 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.74 0.34 -0.31
53 AT1G69420 DHHC-type zinc finger family protein 0.74 0.31 -0.31
54 AT1G06620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.73 0.31 -0.28
55 AT1G09850 xylem bark cysteine peptidase 3 xylem bark cysteine peptidase 3 -0.73 0.31 -0.31
56 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.73 0.31 -0.31
57 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 0.73 0.31 -0.34
58 AT5G63680 Pyruvate kinase family protein -0.73 0.32 -0.32
59 AT5G49980 auxin F-box protein 5 auxin F-box protein 5 0.73 0.31 -0.3
60 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.73 0.31 -0.31
61 AT3G60740 ARM repeat superfamily protein CHAMPIGNON, EMBRYO DEFECTIVE 133,
TUBULIN FOLDING COFACTOR D, TITAN
1		 0.73 0.32 -0.32
62 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 0.73 0.31 -0.3
63 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.73 0.29 -0.33
64 AT2G47690 NADH-ubiquinone oxidoreductase-related -0.73 0.31 -0.3
65 AT2G27690 cytochrome P450, family 94, subfamily C, polypeptide 1 cytochrome P450, family 94,
subfamily C, polypeptide 1		 -0.72 0.31 -0.31
66 AT2G29500 HSP20-like chaperones superfamily protein -0.72 0.3 -0.3
67 AT1G65980 thioredoxin-dependent peroxidase 1 thioredoxin-dependent peroxidase 1 -0.72 0.31 -0.31
68 AT2G33860 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE TRANSCRIPTION
FACTOR 3, ETTIN		 0.72 0.31 -0.32
69 AT3G26590 MATE efflux family protein -0.72 0.32 -0.3
70 AT4G35830 aconitase 1 aconitase 1 -0.72 0.31 -0.31
71 AT3G62580 Late embryogenesis abundant protein (LEA) family protein -0.72 0.32 -0.34
72 AT3G27240 Cytochrome C1 family -0.72 0.31 -0.33
73 AT3G51290 Protein of unknown function (DUF630) ;Protein of unknown
function (DUF632)		 0.72 0.33 -0.31
74 AT2G04400 Aldolase-type TIM barrel family protein -0.72 0.32 -0.33
75 AT2G41890 curculin-like (mannose-binding) lectin family protein / PAN
domain-containing protein		 0.72 0.31 -0.29
76 AT1G75820 Leucine-rich receptor-like protein kinase family protein ATCLV1, CLAVATA 1, FASCIATA 3,
FLOWER DEVELOPMENT 5		 0.72 0.3 -0.32
77 AT3G54640 tryptophan synthase alpha chain TRYPTOPHAN-REQUIRING 3, tryptophan
synthase alpha chain		 -0.72 0.32 -0.31
78 AT3G08950 electron transport SCO1/SenC family protein homologue of the copper chaperone
SCO1		 -0.72 0.33 -0.32
79 AT1G49890 Family of unknown function (DUF566) QWRF domain containing 2 0.72 0.33 -0.32
80 AT3G45130 lanosterol synthase 1 lanosterol synthase 1 -0.71 0.3 -0.33
81 AT4G29130 hexokinase 1 ARABIDOPSIS THALIANA HEXOKINASE 1,
GLUCOSE INSENSITIVE 2, hexokinase
1		 -0.71 0.32 -0.32
82 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.71 0.31 -0.32
83 AT1G09560 germin-like protein 5 germin-like protein 5 -0.71 0.3 -0.31
84 AT1G02220 NAC domain containing protein 3 NAC domain containing protein 3,
NAC domain containing protein 3		 -0.7 0.3 -0.33
85 AT4G35260 isocitrate dehydrogenase 1 isocitrate dehydrogenase I,
isocitrate dehydrogenase 1		 -0.7 0.29 -0.31
86 AT4G25030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits
to 125 proteins in 36 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.3
87 AT3G20920 translocation protein-related -0.69 0.33 -0.34
88 AT1G74100 sulfotransferase 16 SULFOTRANSFERASE 16, ARABIDOPSIS
SULFOTRANSFERASE 5A, CORONATINE
INDUCED-7, sulfotransferase 16		 -0.69 0.32 -0.34
89 AT5G03290 isocitrate dehydrogenase V isocitrate dehydrogenase V -0.69 0.32 -0.3
90 AT4G23100 glutamate-cysteine ligase ATECS1, CADMIUM SENSITIVE 2,
glutamate-cysteine ligase, GSHA,
PHYTOALEXIN DEFICIENT 2, ROOT
MERISTEMLESS 1		 -0.69 0.33 -0.33
91 AT1G16670 Protein kinase superfamily protein -0.69 0.32 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.8 0.43 -0.47 C0007
93 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		0.72 0.44 -0.45 C0063
94 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.71 0.43 -0.45