AT5G55550 : -
Query Information
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AGICode AT5G55550
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G55550 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.33 -0.32
2 AT3G21660 UBX domain-containing protein -0.65 0.32 -0.33
3 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.33 -0.31
4 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 0.63 0.32 -0.32
5 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 0.62 0.34 -0.31
6 AT1G52420 UDP-Glycosyltransferase superfamily protein 0.62 0.31 -0.32
7 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.62 0.33 -0.31
8 AT5G61160 anthocyanin 5-aromatic acyltransferase 1 anthocyanin 5-aromatic
acyltransferase 1		 0.61 0.3 -0.34
9 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.59 0.29 -0.3
10 AT2G40815 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.59 0.33 -0.3
11 AT4G23440 Disease resistance protein (TIR-NBS class) -0.58 0.31 -0.32
12 AT3G03550 RING/U-box superfamily protein 0.58 0.32 -0.29
13 AT3G32300 transposable element gene -0.57 0.32 -0.34
14 AT1G65360 AGAMOUS-like 23 AGAMOUS-like 23 0.57 0.33 -0.29
15 AT5G54640 Histone superfamily protein ATHTA1, histone H2A 1, RESISTANT
TO AGROBACTERIUM TRANSFORMATION 5		 -0.56 0.33 -0.32
16 AT4G36890 Nucleotide-diphospho-sugar transferases superfamily protein irregular xylem 14 0.56 0.33 -0.29
17 AT3G45820 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.33 -0.33
18 AT4G15320 cellulose synthase-like B6 cellulose synthase-like B6,
CELLULOSE SYNTHASE LIKE B6,
CSLB06, cellulose synthase-like B6		 -0.56 0.3 -0.33
19 AT4G28830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.33 -0.32
20 AT5G24910 cytochrome P450, family 714, subfamily A, polypeptide 1 cytochrome P450, family 714,
subfamily A, polypeptide 1,
EUI-like p450 A1		 0.55 0.31 -0.31
21 AT4G17505 Protein of Unknown Function (DUF239) 0.55 0.32 -0.31
22 AT3G60860 SEC7-like guanine nucleotide exchange family protein 0.55 0.31 -0.32
23 AT1G05880 RING/U-box superfamily protein ARIADNE 12, ARABIDOPSIS ARIADNE 12 -0.55 0.32 -0.35
24 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 0.55 0.33 -0.32
25 AT1G16820 vacuolar ATP synthase catalytic subunit-related /
V-ATPase-related / vacuolar proton pump-related		 -0.54 0.31 -0.32
26 AT1G63530 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G63540.1); Has 10212 Blast hits to 4024 proteins
in 434 species: Archae - 1; Bacteria - 1259; Metazoa -
3608; Fungi - 2247; Plants - 291; Viruses - 90; Other
Eukaryotes - 2716 (source: NCBI BLink).		 0.54 0.33 -0.3
27 AT2G37740 zinc-finger protein 10 ZINC-FINGER PROTEIN 10,
zinc-finger protein 10		 0.54 0.31 -0.31
28 AT4G38640 Plasma-membrane choline transporter family protein 0.54 0.33 -0.32
29 AT2G07360 SH3 domain-containing protein 0.54 0.32 -0.32
30 AT5G18500 Protein kinase superfamily protein 0.54 0.3 -0.32
31 AT1G55180 phospholipase D alpha 4 PLDALPHA4, phospholipase D alpha 4 -0.53 0.31 -0.31
32 AT4G39650 gamma-glutamyl transpeptidase 2 gamma-glutamyl transpeptidase 2 0.53 0.31 -0.32
33 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.53 0.31 -0.3
34 AT1G01660 RING/U-box superfamily protein -0.53 0.33 -0.33
35 AT2G32450 Calcium-binding tetratricopeptide family protein -0.53 0.3 -0.31
36 AT1G61290 syntaxin of plants 124 ATSYP124, syntaxin of plants 124 0.53 0.31 -0.3
37 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 0.53 0.31 -0.3
38 AT5G08510 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.32 -0.31
39 AT5G04890 HSP20-like chaperones superfamily protein RESTRICTED TEV MOVEMENT 2 0.52 0.31 -0.33
40 AT1G01340 cyclic nucleotide gated channel 10 ACBK1, cyclic nucleotide gated
channel 10, cyclic nucleotide
gated channel 10		 0.51 0.31 -0.32
41 AT1G33060 NAC 014 NAC 014, NAC 014 -0.51 0.32 -0.3
42 AT4G00350 MATE efflux family protein -0.51 0.32 -0.33
43 AT1G10620 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 11, proline-rich
extensin-like receptor kinase 11		 0.51 0.32 -0.31
44 AT5G02010 RHO guanyl-nucleotide exchange factor 7 ATROPGEF7, RHO guanyl-nucleotide
exchange factor 7		 -0.5 0.31 -0.32
45 AT3G27960 Tetratricopeptide repeat (TPR)-like superfamily protein 0.5 0.31 -0.31
46 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.5 0.3 -0.32
47 AT1G07705 NOT2 / NOT3 / NOT5 family 0.49 0.3 -0.35
48 AT5G59060 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT5G18880.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.49 0.31 -0.32
49 AT2G46840 DOMAIN OF UNKNOWN FUNCTION 724 4 DOMAIN OF UNKNOWN FUNCTION 724 4,
DOMAIN OF UNKNOWN FUNCTION 724 4		 -0.49 0.32 -0.3
50 AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ALCATRAZ -0.48 0.29 -0.3
51 AT5G62420 NAD(P)-linked oxidoreductase superfamily protein -0.48 0.35 -0.31
52 AT3G45380 transposable element gene -0.48 0.31 -0.32
53 AT2G47060 Protein kinase superfamily protein Pto-interacting 1-4 -0.48 0.32 -0.32
54 AT2G32780 ubiquitin-specific protease 1 ATUBP1, ubiquitin-specific
protease 1		 -0.47 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0166 MST_1705.1 - - - -0.71 0.48 -0.41
56 C0096 Gluconic acid - D-Gluconate - 0.61 0.45 -0.44 C0096