AT5G55120 : VITAMIN C DEFECTIVE 5
Query Information
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AGICode AT5G55120
Description galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 1 0.32 -0.33
2 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.89 0.33 -0.33
3 AT1G77370 Glutaredoxin family protein 0.88 0.3 -0.3
4 AT1G76150 enoyl-CoA hydratase 2 ATECH2, enoyl-CoA hydratase 2 0.86 0.31 -0.32
5 AT5G42850 Thioredoxin superfamily protein 0.85 0.31 -0.33
6 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.85 0.32 -0.32
7 AT1G14120 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.84 0.33 -0.31
8 AT3G52850 vacuolar sorting receptor homolog 1 ARABIDOPSIS THALIANA EPIDERMAL
GROWTH FACTOR RECEPTOR-LIKE
PROTEIN, ATELP1, ATVSR1, BP-80,
BP80, binding protein of 80 kDa
1;1, BP80B, Green fluorescent seed
1, vacuolar sorting receptor
homolog 1, VACUOLAR SORTING
RECEPTOR 1;1		 0.84 0.31 -0.31
9 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 0.84 0.32 -0.33
10 AT1G55020 lipoxygenase 1 ARABIDOPSIS LIPOXYGENASE 1,
lipoxygenase 1		 0.84 0.33 -0.31
11 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 0.84 0.32 -0.32
12 AT2G36950 Heavy metal transport/detoxification superfamily protein 0.83 0.33 -0.32
13 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 -0.82 0.31 -0.29
14 AT4G30550 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 3 0.82 0.31 -0.3
15 AT3G17250 Protein phosphatase 2C family protein 0.82 0.33 -0.3
16 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 0.82 0.31 -0.31
17 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase 0.82 0.29 -0.33
18 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 0.82 0.32 -0.3
19 AT5G62210 Embryo-specific protein 3, (ATS3) -0.81 0.31 -0.31
20 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 0.81 0.31 -0.3
21 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 0.81 0.32 -0.31
22 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 0.81 0.32 -0.33
23 AT1G77420 alpha/beta-Hydrolases superfamily protein 0.81 0.29 -0.31
24 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE 0.81 0.31 -0.33
25 AT5G06870 polygalacturonase inhibiting protein 2 ARABIDOPSIS POLYGALACTURONASE
INHIBITING PROTEIN 2,
polygalacturonase inhibiting
protein 2		 0.81 0.33 -0.31
26 AT2G42600 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 2,
phosphoenolpyruvate carboxylase 2		 -0.81 0.33 -0.35
27 AT5G41060 DHHC-type zinc finger family protein -0.81 0.29 -0.31
28 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.81 0.32 -0.31
29 AT5G26600 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.8 0.33 -0.3
30 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3		 0.8 0.33 -0.33
31 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 0.8 0.32 -0.33
32 AT5G10300 methyl esterase 5 AtHNL, ARABIDOPSIS THALIANA METHYL
ESTERASE 5, HYDROXYNITRILE LYASE,
methyl esterase 5		 0.8 0.33 -0.33
33 AT1G04440 casein kinase like 13 casein kinase like 13 0.79 0.3 -0.32
34 AT2G25910 3'-5' exonuclease domain-containing protein / K homology
domain-containing protein / KH domain-containing protein		 0.79 0.3 -0.32
35 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.79 0.31 -0.33
36 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 0.79 0.3 -0.3
37 AT4G34540 NmrA-like negative transcriptional regulator family protein 0.79 0.3 -0.32
38 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 -0.79 0.28 -0.32
39 AT2G24590 RNA recognition motif and CCHC-type zinc finger domains
containing protein		 RS-containing zinc finger protein
22a, RS-containing zinc finger
protein 22a		 -0.79 0.33 -0.33
40 AT3G51450 Calcium-dependent phosphotriesterase superfamily protein 0.79 0.33 -0.3
41 AT1G76470 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.31 -0.33
42 AT4G31360 selenium binding -0.78 0.31 -0.32
43 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 -0.78 0.31 -0.3
44 AT5G66530 Galactose mutarotase-like superfamily protein -0.78 0.32 -0.32
45 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 0.78 0.32 -0.32
46 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 0.78 0.33 -0.32
47 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 0.78 0.3 -0.31
48 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 -0.78 0.32 -0.3
49 AT1G18090 5'-3' exonuclease family protein -0.78 0.34 -0.32
50 AT1G22740 RAB GTPase homolog G3B ATRABG3B, RAB7, RAB75, RAB GTPase
homolog G3B		 -0.77 0.32 -0.33
51 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 0.77 0.32 -0.3
52 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein -0.77 0.32 -0.31
53 AT1G52410 TSK-associating protein 1 TSK-associating protein 1 0.77 0.3 -0.31
54 AT3G28050 nodulin MtN21 /EamA-like transporter family protein 0.77 0.31 -0.36
55 AT1G56700 Peptidase C15, pyroglutamyl peptidase I-like 0.77 0.3 -0.3
56 AT1G75990 PAM domain (PCI/PINT associated module) protein -0.77 0.29 -0.31
57 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.77 0.32 -0.31
58 AT3G50280 HXXXD-type acyl-transferase family protein 0.77 0.32 -0.29
59 AT2G45970 cytochrome P450, family 86, subfamily A, polypeptide 8 cytochrome P450, family 86,
subfamily A, polypeptide 8,
LACERATA		 -0.77 0.31 -0.31
60 AT4G27860 vacuolar iron transporter (VIT) family protein 0.76 0.32 -0.33
61 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 -0.76 0.3 -0.32
62 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.76 0.31 -0.29
63 AT2G39310 jacalin-related lectin 22 jacalin-related lectin 22 0.76 0.33 -0.32
64 AT5G23810 amino acid permease 7 amino acid permease 7 0.76 0.32 -0.32
65 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 -0.76 0.3 -0.31
66 AT5G65750 2-oxoglutarate dehydrogenase, E1 component 0.76 0.3 -0.32
67 AT2G41480 Peroxidase superfamily protein 0.76 0.33 -0.33
68 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.76 0.29 -0.34
69 AT1G54020 GDSL-like Lipase/Acylhydrolase superfamily protein 0.76 0.32 -0.32
70 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 0.76 0.34 -0.32
71 AT5G64330 Phototropic-responsive NPH3 family protein JK218, NON-PHOTOTROPIC HYPOCOTYL
3, ROOT PHOTOTROPISM 3		 -0.76 0.3 -0.32
72 AT1G53560 Ribosomal protein L18ae family 0.76 0.31 -0.32
73 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 0.76 0.31 -0.33
74 AT3G11660 NDR1/HIN1-like 1 NDR1/HIN1-like 1 0.76 0.33 -0.33
75 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 -0.75 0.3 -0.33
76 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.75 0.3 -0.31
77 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 -0.75 0.3 -0.32
78 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 -0.75 0.31 -0.34
79 AT3G60320 Protein of unknown function (DUF630 and DUF632) -0.75 0.31 -0.31
80 AT3G21230 4-coumarate:CoA ligase 5 4-coumarate:CoA ligase 5 0.75 0.31 -0.32
81 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.33 -0.31
82 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 0.75 0.31 -0.32
83 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.75 0.33 -0.31
84 AT4G38810 Calcium-binding EF-hand family protein 0.75 0.32 -0.31
85 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 0.75 0.31 -0.32
86 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 0.75 0.32 -0.31
87 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.75 0.31 -0.33
88 AT3G23570 alpha/beta-Hydrolases superfamily protein 0.74 0.32 -0.3
89 AT5G12200 pyrimidine 2 pyrimidine 2 0.74 0.34 -0.32
90 AT5G63380 AMP-dependent synthetase and ligase family protein -0.74 0.31 -0.3
91 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 0.74 0.29 -0.32
92 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 -0.74 0.3 -0.3
93 AT2G34060 Peroxidase superfamily protein -0.74 0.33 -0.3
94 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 -0.74 0.33 -0.3
95 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.74 0.31 -0.32
96 AT4G28190 Developmental regulator, ULTRAPETALA ULTRAPETALA, ULTRAPETALA1 -0.74 0.31 -0.32
97 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 0.74 0.29 -0.32
98 AT1G48580 unknown protein; Has 91 Blast hits to 91 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.74 0.31 -0.32
99 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.33
100 AT1G51940 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 -0.74 0.31 -0.29
101 AT4G38050 Xanthine/uracil permease family protein -0.74 0.34 -0.33
102 AT1G20490 AMP-dependent synthetase and ligase family protein 0.73 0.32 -0.3
103 AT3G55005 tonneau 1b (TON1b) tonneau 1b -0.73 0.33 -0.31
104 AT5G07860 HXXXD-type acyl-transferase family protein 0.73 0.32 -0.31
105 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 0.73 0.32 -0.31
106 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 0.73 0.33 -0.31
107 AT5G01010 CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has
172 Blast hits to 172 proteins in 43 species: Archae - 0;
Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 63; Viruses
- 0; Other Eukaryotes - 14 (source: NCBI BLink).		 0.73 0.33 -0.32
108 AT1G61065 Protein of unknown function (DUF1218) 0.73 0.3 -0.3
109 AT1G19270 DA1 DA1 0.73 0.32 -0.3
110 AT5G06980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.3 -0.3
111 AT3G23240 ethylene response factor 1 ETHYLENE RESPONSE FACTOR 1,
ethylene response factor 1		 0.73 0.33 -0.32
112 AT2G39330 jacalin-related lectin 23 jacalin-related lectin 23 0.73 0.32 -0.31
113 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 -0.73 0.32 -0.32
114 AT4G27720 Major facilitator superfamily protein -0.73 0.31 -0.33
115 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 0.73 0.3 -0.32
116 AT1G66350 RGA-like 1 RGL, RGA-like 1 0.73 0.31 -0.29
117 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.73 0.31 -0.29
118 AT2G31270 homolog of yeast CDT1 A ARABIDOPSIS HOMOLOG OF YEAST CDT1
A, ARABIDOPSIS HOMOLOG OF YEAST
CDT1, homolog of yeast CDT1 A		 -0.73 0.31 -0.31
119 AT2G04940 scramblase-related 0.73 0.31 -0.31
120 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 -0.72 0.32 -0.32
121 AT3G56130 biotin/lipoyl attachment domain-containing protein -0.72 0.35 -0.32
122 AT3G18190 TCP-1/cpn60 chaperonin family protein -0.72 0.3 -0.31
123 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 -0.72 0.33 -0.32
124 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 -0.72 0.32 -0.33
125 AT3G62220 Protein kinase superfamily protein -0.72 0.32 -0.33
126 AT5G41670 6-phosphogluconate dehydrogenase family protein -0.71 0.31 -0.31
127 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 -0.71 0.32 -0.32
128 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.71 0.3 -0.33
129 AT1G13030 sphere organelles protein-related -0.71 0.31 -0.34
130 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.71 0.3 -0.33
131 AT5G42100 beta-1,3-glucanase_putative ARABIDOPSIS THALIANA
BETA-1,3-GLUCANASE_PUTATIVE,
beta-1,3-glucanase_putative		 -0.71 0.33 -0.32
132 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 -0.7 0.34 -0.32
133 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.7 0.34 -0.3
134 AT1G12580 phosphoenolpyruvate carboxylase-related kinase 1 phosphoenolpyruvate
carboxylase-related kinase 1		 -0.7 0.32 -0.31
135 AT3G02250 O-fucosyltransferase family protein -0.7 0.3 -0.3
136 AT4G04330 Chaperonin-like RbcX protein AtRbcX1, homologue of
cyanobacterial RbcX 1		 -0.7 0.31 -0.32
137 AT4G30680 Initiation factor eIF-4 gamma, MA3 -0.69 0.33 -0.34
138 AT5G52920 plastidic pyruvate kinase beta subunit 1 plastidic pyruvate kinase beta
subunit 1, PLASTIDIAL PYRUVATE
KINASE 1, PLASTIDIAL PYRUVATE
KINASE 2		 -0.69 0.32 -0.31
139 AT3G05660 receptor like protein 33 receptor like protein 33, receptor
like protein 33		 -0.69 0.3 -0.33
140 AT3G02760 Class II aaRS and biotin synthetases superfamily protein -0.69 0.32 -0.3
141 AT4G27520 early nodulin-like protein 2 AtENODL2, early nodulin-like
protein 2		 -0.69 0.32 -0.32
142 AT5G10020 Leucine-rich receptor-like protein kinase family protein -0.69 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
143 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		-0.75 0.43 -0.44 C0093