AT5G55220 : -
Query Information
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AGICode AT5G55220
Description trigger factor type chaperone family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G55220 trigger factor type chaperone family protein 1 0.3 -0.32
2 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.95 0.34 -0.32
3 AT5G65220 Ribosomal L29 family protein 0.94 0.32 -0.32
4 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.94 0.29 -0.33
5 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.94 0.32 -0.3
6 AT5G47190 Ribosomal protein L19 family protein 0.93 0.29 -0.33
7 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.92 0.3 -0.32
8 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.92 0.3 -0.31
9 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.92 0.33 -0.33
10 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.92 0.32 -0.32
11 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.31 -0.31
12 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.92 0.31 -0.3
13 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.92 0.31 -0.31
14 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.92 0.34 -0.31
15 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.92 0.28 -0.32
16 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.91 0.31 -0.33
17 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.91 0.34 -0.29
18 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.91 0.33 -0.31
19 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.91 0.3 -0.31
20 AT2G33450 Ribosomal L28 family 0.91 0.34 -0.29
21 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.91 0.29 -0.35
22 AT3G12930 Lojap-related protein 0.91 0.34 -0.33
23 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.91 0.31 -0.34
24 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.91 0.33 -0.32
25 AT2G43030 Ribosomal protein L3 family protein 0.91 0.33 -0.31
26 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.91 0.31 -0.31
27 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.91 0.33 -0.31
28 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.91 0.32 -0.33
29 AT3G51140 Protein of unknown function (DUF3353) 0.91 0.31 -0.31
30 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.91 0.32 -0.31
31 AT4G17560 Ribosomal protein L19 family protein 0.9 0.31 -0.31
32 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.9 0.31 -0.3
33 AT4G26370 antitermination NusB domain-containing protein 0.9 0.31 -0.31
34 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.9 0.32 -0.32
35 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.32 -0.32
36 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.9 0.32 -0.3
37 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.9 0.32 -0.33
38 AT1G14270 CAAX amino terminal protease family protein 0.9 0.33 -0.32
39 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.9 0.31 -0.28
40 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.9 0.32 -0.31
41 AT1G29070 Ribosomal protein L34 0.9 0.29 -0.31
42 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.9 0.3 -0.3
43 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.9 0.32 -0.31
44 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.9 0.3 -0.32
45 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.32 -0.31
46 AT1G06190 Rho termination factor 0.89 0.31 -0.31
47 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.89 0.31 -0.32
48 AT3G54210 Ribosomal protein L17 family protein 0.89 0.31 -0.31
49 AT4G01310 Ribosomal L5P family protein 0.89 0.31 -0.3
50 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.89 0.33 -0.34
51 AT1G60230 Radical SAM superfamily protein 0.89 0.31 -0.32
52 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.32 -0.31
53 AT4G37510 Ribonuclease III family protein 0.89 0.3 -0.29
54 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.89 0.33 -0.31
55 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.89 0.33 -0.31
56 AT2G14880 SWIB/MDM2 domain superfamily protein 0.89 0.32 -0.35
57 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.89 0.3 -0.33
58 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.89 0.3 -0.31
59 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.33 -0.33
60 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.33 -0.31
61 AT4G34290 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.33
62 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.88 0.33 -0.32
63 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.88 0.33 -0.33
64 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.88 0.3 -0.33
65 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.88 0.31 -0.32
66 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.3 -0.31
67 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.88 0.34 -0.31
68 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.88 0.32 -0.3
69 AT2G22230 Thioesterase superfamily protein 0.88 0.31 -0.32
70 AT2G24060 Translation initiation factor 3 protein 0.88 0.31 -0.3
71 AT1G36390 Co-chaperone GrpE family protein 0.88 0.32 -0.31
72 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.88 0.29 -0.34
73 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.88 0.32 -0.32
74 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.88 0.33 -0.31
75 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.88 0.33 -0.34
76 AT2G24090 Ribosomal protein L35 0.88 0.32 -0.31
77 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.88 0.29 -0.29
78 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.88 0.33 -0.31
79 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.88 0.3 -0.34
80 AT2G39670 Radical SAM superfamily protein 0.88 0.33 -0.34
81 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.87 0.31 -0.31
82 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.87 0.31 -0.3
83 AT1G80640 Protein kinase superfamily protein 0.87 0.31 -0.32
84 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.87 0.32 -0.32
85 AT5G44190 GOLDEN2-like 2 ATGLK2, GOLDEN2-like 2, GBF'S
PRO-RICH REGION-INTERACTING FACTOR
2		 0.87 0.32 -0.32
86 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.87 0.32 -0.32
87 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.87 0.3 -0.3
88 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.87 0.3 -0.31
89 AT3G25660 Amidase family protein 0.87 0.33 -0.3
90 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.29 -0.31
91 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.87 0.32 -0.32
92 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.87 0.31 -0.31
93 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.87 0.32 -0.31
94 AT5G08650 Small GTP-binding protein 0.87 0.32 -0.32
95 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.87 0.31 -0.33
96 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.87 0.33 -0.32
97 AT5G18780 F-box/RNI-like superfamily protein -0.81 0.31 -0.32
98 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.8 0.31 -0.33
99 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.8 0.32 -0.3
100 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.8 0.31 -0.32
101 AT3G25290 Auxin-responsive family protein -0.8 0.32 -0.31
102 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.78 0.3 -0.31
103 AT4G14010 ralf-like 32 ralf-like 32 -0.78 0.34 -0.33
104 AT5G06750 Protein phosphatase 2C family protein -0.77 0.3 -0.31
105 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.77 0.34 -0.32
106 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.76 0.31 -0.33
107 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.75 0.32 -0.33
108 AT5G24090 chitinase A chitinase A, chitinase A -0.74 0.3 -0.32
109 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.34 -0.29
110 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.73 0.3 -0.31
111 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.73 0.32 -0.3
112 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.71 0.31 -0.31
113 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.71 0.32 -0.33
114 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.35 -0.32