AT5G54750 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G54750
Description Transport protein particle (TRAPP) component
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54750 Transport protein particle (TRAPP) component 1 0.3 -0.3
2 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.3 -0.3
3 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.81 0.31 -0.3
4 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.32 -0.29
5 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.81 0.34 -0.31
6 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.79 0.34 -0.3
7 AT2G37500 arginine biosynthesis protein ArgJ family 0.79 0.32 -0.29
8 AT4G22310 Uncharacterised protein family (UPF0041) 0.79 0.32 -0.32
9 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.79 0.32 -0.32
10 AT3G22950 ADP-ribosylation factor C1 ADP-ribosylation factor C1,
ADP-ribosylation factor C1		 0.78 0.3 -0.32
11 AT3G46430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.78 0.32 -0.3
12 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 0.78 0.33 -0.32
13 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.78 0.31 -0.34
14 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 0.77 0.31 -0.31
15 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.77 0.32 -0.3
16 AT5G53310 myosin heavy chain-related 0.77 0.31 -0.32
17 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7		 0.77 0.32 -0.31
18 AT1G67250 Proteasome maturation factor UMP1 0.77 0.31 -0.32
19 AT1G09920 TRAF-type zinc finger-related 0.77 0.31 -0.3
20 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 0.76 0.32 -0.33
21 AT2G22425 Microsomal signal peptidase 12 kDa subunit (SPC12) 0.76 0.31 -0.32
22 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.76 0.32 -0.32
23 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.76 0.32 -0.32
24 AT4G38630 regulatory particle non-ATPase 10 ATMCB1, MULTIUBIQUITIN CHAIN
BINDING PROTEIN 1,
MULTIUBIQUITIN-CHAIN-BINDING
PROTEIN 1, regulatory particle
non-ATPase 10		 0.76 0.32 -0.32
25 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 0.76 0.32 -0.33
26 AT1G23220 Dynein light chain type 1 family protein 0.76 0.3 -0.31
27 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.76 0.33 -0.32
28 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED 0.75 0.3 -0.33
29 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.75 0.29 -0.3
30 AT2G36300 Integral membrane Yip1 family protein 0.75 0.31 -0.31
31 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.75 0.31 -0.31
32 AT1G72020 unknown protein; Has 52 Blast hits to 52 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.32 -0.31
33 AT4G22220 SufE/NifU family protein ATISU1, ISU1 0.75 0.33 -0.31
34 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.75 0.29 -0.31
35 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.75 0.33 -0.32
36 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.75 0.3 -0.31
37 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 0.75 0.33 -0.32
38 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.75 0.31 -0.31
39 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.74 0.31 -0.31
40 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.74 0.33 -0.33
41 AT1G48850 chorismate synthase, putative /
5-enolpyruvylshikimate-3-phosphate phospholyase, putative		 embryo defective 1144 0.74 0.3 -0.31
42 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.74 0.31 -0.31
43 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.73 0.31 -0.33
44 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 0.73 0.3 -0.32
45 AT3G07680 emp24/gp25L/p24 family/GOLD family protein 0.73 0.31 -0.29
46 AT2G23940 Protein of unknown function (DUF788) 0.73 0.32 -0.3
47 AT3G07470 Protein of unknown function, DUF538 0.73 0.32 -0.34
48 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0.73 0.31 -0.32
49 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 0.73 0.29 -0.33
50 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.73 0.32 -0.29
51 AT5G20500 Glutaredoxin family protein 0.73 0.32 -0.29
52 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.73 0.32 -0.34
53 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 0.73 0.33 -0.32
54 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.73 0.31 -0.34
55 AT5G61240 Leucine-rich repeat (LRR) family protein 0.73 0.32 -0.33
56 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.73 0.32 -0.31
57 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.73 0.31 -0.32
58 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.73 0.31 -0.31
59 AT1G53850 20S proteasome alpha subunit E1 ARABIDOPSIS 20S PROTEASOME ALPHA
SUBUNIT E1, 20S proteasome alpha
subunit E1		 0.72 0.33 -0.33
60 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.34 -0.31
61 AT3G05500 Rubber elongation factor protein (REF) 0.72 0.32 -0.3
62 AT2G40765 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.34 -0.31
63 AT1G05270 TraB family protein 0.72 0.32 -0.32
64 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.72 0.32 -0.31
65 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.72 0.33 -0.29
66 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.72 0.33 -0.31
67 AT5G50460 secE/sec61-gamma protein transport protein 0.72 0.32 -0.32
68 AT3G21865 peroxin 22 peroxin 22 0.71 0.33 -0.31
69 AT5G17560 BolA-like family protein 0.71 0.29 -0.35
70 AT2G17380 associated protein 19 associated protein 19 0.71 0.31 -0.31
71 AT1G28120 CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain
(InterPro:IPR003323), Ubiquitin thioesterase Otubain
(InterPro:IPR016615), Peptidase C65, otubain
(InterPro:IPR019400); Has 413 Blast hits to 411 proteins in
139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi
- 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.71 0.3 -0.34
72 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.71 0.32 -0.32
73 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 0.71 0.33 -0.3
74 AT1G47830 SNARE-like superfamily protein 0.71 0.32 -0.3
75 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.71 0.31 -0.33
76 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.71 0.32 -0.3
77 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 0.71 0.33 -0.3
78 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.7 0.31 -0.32
79 AT3G46060 RAB GTPase homolog 8A ARA-3, ARA3, RAB GTPase homolog
8A, ATRABE1C, RAB GTPase homolog
8A, RABE1c		 0.7 0.33 -0.33
80 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.7 0.33 -0.31
81 AT1G22200 Endoplasmic reticulum vesicle transporter protein 0.7 0.31 -0.29
82 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.7 0.32 -0.3
83 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.33
84 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.7 0.33 -0.34
85 AT5G20090 Uncharacterised protein family (UPF0041) 0.7 0.32 -0.31
86 AT1G71940 SNARE associated Golgi protein family 0.7 0.31 -0.33
87 AT5G27820 Ribosomal L18p/L5e family protein 0.69 0.32 -0.31
88 AT3G50520 Phosphoglycerate mutase family protein 0.69 0.3 -0.32
89 AT1G14000 VH1-interacting kinase VH1-interacting kinase 0.69 0.3 -0.34
90 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 0.69 0.33 -0.3
91 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.69 0.32 -0.33
92 AT4G12590 Protein of unknown function DUF106, transmembrane 0.69 0.32 -0.31
93 AT5G38480 general regulatory factor 3 general regulatory factor 3, RCI1 0.69 0.32 -0.31
94 AT4G00300 fringe-related protein 0.69 0.3 -0.3
95 AT4G14420 HR-like lesion-inducing protein-related 0.69 0.29 -0.32
96 AT5G64480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.69 0.31 -0.35
97 AT2G46505 succinate dehydrogenase subunit 4 succinate dehydrogenase subunit 4 0.69 0.34 -0.32
98 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.66 0.31 -0.32
99 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.3 -0.31
100 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.66 0.3 -0.3
101 AT5G41640 Protein of unknown function (DUF626) -0.65 0.33 -0.31
102 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.64 0.34 -0.3
103 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.62 0.3 -0.3
104 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.61 0.32 -0.3
105 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.61 0.32 -0.3
106 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 -0.6 0.31 -0.32
107 AT2G07650 transposable element gene -0.6 0.34 -0.31
108 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.59 0.3 -0.33
109 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.58 0.31 -0.31
110 AT3G43100 transposable element gene -0.57 0.32 -0.31
111 AT1G31030 transposable element gene -0.57 0.31 -0.3
112 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 -0.57 0.33 -0.32
113 AT1G63190 Cystatin/monellin superfamily protein -0.57 0.3 -0.32
114 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.56 0.29 -0.32
115 AT2G07693 transposable element gene -0.55 0.32 -0.32
116 AT4G14920 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.55 0.31 -0.32
117 AT4G08650 transposable element gene -0.55 0.31 -0.31