AT5G54780 : -
Query Information
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AGICode AT5G54780
Description Ypt/Rab-GAP domain of gyp1p superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54780 Ypt/Rab-GAP domain of gyp1p superfamily protein 1 0.31 -0.33
2 AT1G62045 BEST Arabidopsis thaliana protein match is: ankyrin repeat
family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.86 0.33 -0.34
3 AT1G68410 Protein phosphatase 2C family protein 0.82 0.31 -0.31
4 AT3G22290 Endoplasmic reticulum vesicle transporter protein 0.8 0.3 -0.3
5 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI 0.8 0.3 -0.3
6 AT5G62050 homolog of yeast oxidase assembly 1 (OXA1) ARABIDOPSIS THALIANA HOMOLOG OF
YEAST OXIDASE ASSEMBLY 1 (OXA1),
homolog of yeast oxidase assembly
1 (OXA1), HOMOLOG OF YEAST OXIDASE
ASSEMBLY 1 (OXA1) IN ARABIDOPSIS
THALIANA		 0.79 0.32 -0.32
7 AT2G15050 lipid transfer protein lipid transfer protein, lipid
transfer protein 7		 -0.78 0.31 -0.32
8 AT4G30110 heavy metal atpase 2 ARABIDOPSIS HEAVY METAL ATPASE 2,
heavy metal atpase 2		 -0.78 0.31 -0.31
9 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 0.78 0.3 -0.33
10 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 0.77 0.31 -0.31
11 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6		 -0.77 0.3 -0.32
12 AT4G39690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial
inner membrane protein Mitofilin (InterPro:IPR019133); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.32 -0.33
13 AT1G54200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits
to 581 proteins in 136 species: Archae - 0; Bacteria - 72;
Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other
Eukaryotes - 620 (source: NCBI BLink).		 -0.76 0.31 -0.32
14 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.76 0.31 -0.3
15 AT5G64230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.75 0.32 -0.31
16 AT2G44100 guanosine nucleotide diphosphate dissociation inhibitor 1 AT-GDI1, guanosine nucleotide
diphosphate dissociation inhibitor
1, guanosine nucleotide
diphosphate dissociation inhibitor
1		 0.75 0.3 -0.31
17 AT3G47930 L-galactono-1,4-lactone dehydrogenase L-galactono-1,4-lactone
dehydrogenase,
L-galactono-1,4-lactone
dehydrogenase		 0.75 0.3 -0.32
18 AT3G20800 Cell differentiation, Rcd1-like protein 0.75 0.3 -0.31
19 AT3G51390 DHHC-type zinc finger family protein 0.75 0.33 -0.32
20 AT1G05000 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP1, plant and fungi
atypical dual-specificity
phosphatase 1		 0.75 0.31 -0.29
21 AT5G17600 RING/U-box superfamily protein -0.75 0.32 -0.32
22 AT5G59350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.32 -0.29
23 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 0.74 0.32 -0.33
24 AT2G17040 NAC domain containing protein 36 NAC domain containing protein 36,
NAC domain containing protein 36		 -0.74 0.31 -0.33
25 AT5G03905 Iron-sulphur cluster biosynthesis family protein 0.74 0.3 -0.33
26 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 0.74 0.33 -0.31
27 AT3G51460 Phosphoinositide phosphatase family protein ROOT HAIR DEFECTIVE4 0.74 0.31 -0.3
28 AT1G65900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to
306 proteins in 119 species: Archae - 19; Bacteria - 238;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 -0.74 0.31 -0.32
29 AT4G37550 Acetamidase/Formamidase family protein -0.73 0.33 -0.33
30 AT5G40380 cysteine-rich RLK (RECEPTOR-like protein kinase) 42 cysteine-rich RLK (RECEPTOR-like
protein kinase) 42		 -0.73 0.31 -0.32
31 AT1G64400 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 3 -0.73 0.31 -0.35
32 AT1G74230 glycine-rich RNA-binding protein 5 glycine-rich RNA-binding protein 5 0.73 0.31 -0.33
33 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein -0.73 0.3 -0.28
34 AT5G01240 like AUXIN RESISTANT 1 like AUXIN RESISTANT 1 -0.73 0.3 -0.3
35 AT4G28300 Protein of unknown function (DUF1421) 0.73 0.31 -0.34
36 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 0.72 0.33 -0.3
37 AT5G10820 Major facilitator superfamily protein 0.72 0.32 -0.33
38 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.3 -0.33
39 AT1G63180 UDP-D-glucose/UDP-D-galactose 4-epimerase 3 UDP-D-glucose/UDP-D-galactose
4-epimerase 3		 0.72 0.31 -0.31
40 AT3G60450 Phosphoglycerate mutase family protein 0.72 0.32 -0.3
41 AT4G08685 Pollen Ole e 1 allergen and extensin family protein SAH7 -0.72 0.31 -0.28
42 AT2G01190 Octicosapeptide/Phox/Bem1p family protein PIGMENT DEFECTIVE 331 0.72 0.34 -0.3
43 AT2G23560 methyl esterase 7 ARABIDOPSIS THALIANA METHYL
ESTERASE 7, methyl esterase 7		 0.72 0.3 -0.32
44 AT2G47960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF974 (InterPro:IPR010378); Has 285 Blast
hits to 284 proteins in 126 species: Archae - 0; Bacteria -
0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0;
Other Eukaryotes - 35 (source: NCBI BLink).		 0.71 0.31 -0.3
45 AT1G06890 nodulin MtN21 /EamA-like transporter family protein 0.71 0.32 -0.32
46 AT4G21960 Peroxidase superfamily protein PRXR1 -0.71 0.29 -0.33
47 AT1G49430 long-chain acyl-CoA synthetase 2 long-chain acyl-CoA synthetase 2,
LATERAL ROOT DEVELOPMENT 2		 -0.7 0.31 -0.3
48 AT5G44410 FAD-binding Berberine family protein -0.7 0.31 -0.34
49 AT4G17895 ubiquitin-specific protease 20 ubiquitin-specific protease 20 0.7 0.31 -0.32
50 AT4G03240 frataxin homolog ATFH, frataxin homolog 0.7 0.32 -0.34
51 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 0.7 0.32 -0.35
52 AT4G33080 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.7 0.31 -0.33
53 AT1G13100 cytochrome P450, family 71, subfamily B, polypeptide 29 cytochrome P450, family 71,
subfamily B, polypeptide 29		 -0.7 0.32 -0.29
54 AT3G18490 Eukaryotic aspartyl protease family protein -0.69 0.3 -0.31
55 AT1G68220 Protein of unknown function (DUF1218) -0.69 0.3 -0.3
56 AT1G20070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; Has 26 Blast hits to 26 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.31 -0.31
57 AT2G44745 WRKY family transcription factor -0.69 0.32 -0.31
58 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.28 -0.33
59 AT1G70830 MLP-like protein 28 MLP-like protein 28 -0.69 0.3 -0.33
60 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.67 0.3 -0.33
61 AT4G00360 cytochrome P450, family 86, subfamily A, polypeptide 2 ABERRANT INDUCTION OF TYPE THREE
1, cytochrome P450, family 86,
subfamily A, polypeptide 2		 -0.67 0.3 -0.33
62 AT3G46540 ENTH/VHS family protein -0.67 0.3 -0.31
63 AT5G03140 Concanavalin A-like lectin protein kinase family protein -0.66 0.33 -0.32
64 AT1G01620 plasma membrane intrinsic protein 1C PLASMA MEMBRANE INTRINSIC PROTEIN
1;3, plasma membrane intrinsic
protein 1C, TMP-B		 -0.66 0.34 -0.31
65 AT5G13400 Major facilitator superfamily protein -0.66 0.31 -0.32
66 AT2G47630 alpha/beta-Hydrolases superfamily protein -0.66 0.32 -0.32
67 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 -0.65 0.33 -0.31
68 AT4G12890 Gamma interferon responsive lysosomal thiol (GILT)
reductase family protein		 -0.65 0.31 -0.31
69 AT2G04450 nudix hydrolase homolog 6 nudix hydrolase homolog 6,
Arabidopsis thaliana nucleoside
diphosphate linked to some moiety
X 6, nudix hydrolase homolog 6,
nucleoside diphosphates linked to
some moiety X 6		 -0.65 0.32 -0.31
70 AT1G13370 Histone superfamily protein -0.65 0.32 -0.32
71 AT3G48460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.65 0.32 -0.29
72 AT5G47800 Phototropic-responsive NPH3 family protein -0.65 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
73 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.89 0.42 -0.45 C0067