AT5G54890 : -
Query Information
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AGICode AT5G54890
Description RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1 0.33 -0.29
2 AT3G28560 BCS1 AAA-type ATPase -0.66 0.3 -0.35
3 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.31 -0.3
4 AT2G04000 transposable element gene -0.64 0.32 -0.32
5 AT3G47740 ABC2 homolog 2 ATP-binding cassette A3, A.
THALIANA ABC2 HOMOLOG 2, ABC2
homolog 2		 0.64 0.31 -0.33
6 AT4G20370 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TWIN SISTER OF FT 0.63 0.33 -0.31
7 AT5G38820 Transmembrane amino acid transporter family protein 0.63 0.3 -0.32
8 AT5G06920 FASCICLIN-like arabinogalactan protein 21 precursor FASCICLIN-like arabinogalactan
protein 21 precursor		 0.62 0.31 -0.33
9 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.61 0.3 -0.3
10 AT1G54955 transposable element gene -0.6 0.33 -0.33
11 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.32 -0.31
12 AT2G01280 Cyclin/Brf1-like TBP-binding protein maternal effect embryo arrest 65 0.6 0.33 -0.32
13 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 0.59 0.31 -0.28
14 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 0.59 0.3 -0.32
15 AT2G24140 Protein of unknown function, DUF593 -0.59 0.31 -0.29
16 AT1G18610 Galactose oxidase/kelch repeat superfamily protein 0.59 0.31 -0.32
17 AT4G28760 Protein of unknown function (DUF3741) 0.58 0.31 -0.34
18 AT4G23320 cysteine-rich RLK (RECEPTOR-like protein kinase) 24 cysteine-rich RLK (RECEPTOR-like
protein kinase) 24		 -0.58 0.34 -0.31
19 AT3G63020 Protein of unknown function (DUF3049) 0.58 0.3 -0.32
20 AT4G38640 Plasma-membrane choline transporter family protein 0.58 0.3 -0.31
21 AT1G53165 Protein kinase superfamily protein ATMAP4K ALPHA1 0.58 0.32 -0.32
22 AT4G11510 ralf-like 28 ralf-like 28 0.57 0.3 -0.32
23 AT3G29800 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.32
24 AT5G55490 gamete expressed protein 1 GAMETE EXPRESSED PROTEIN 1, gamete
expressed protein 1		 0.56 0.31 -0.31
25 AT2G20250 unknown protein; Has 10 Blast hits to 10 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.32
26 AT5G40970 Protein of unknown function (DUF 3339) 0.55 0.3 -0.31
27 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.55 0.31 -0.31
28 AT5G25920 BEST Arabidopsis thaliana protein match is: Eukaryotic
aspartyl protease family protein (TAIR:AT3G29750.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.29 -0.3
29 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 0.55 0.31 -0.32
30 AT3G32300 transposable element gene -0.55 0.32 -0.33
31 AT5G35160 Endomembrane protein 70 protein family 0.54 0.34 -0.3
32 AT3G16020 F-box associated ubiquitination effector protein 0.54 0.32 -0.32
33 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.31 -0.3
34 AT3G49130 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 -0.54 0.31 -0.31
35 AT3G21040 transposable element gene -0.54 0.31 -0.31
36 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 0.54 0.3 -0.31
37 AT3G57460 catalytics;metal ion binding -0.53 0.3 -0.32
38 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.53 0.31 -0.33
39 AT5G67440 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 2, NAKED PINS
IN YUC MUTANTS 3		 0.53 0.3 -0.3
40 AT5G35470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.31 -0.32
41 AT2G14595 transposable element gene 0.53 0.3 -0.32
42 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 0.53 0.32 -0.31
43 AT5G59710 VIRE2 interacting protein 2 AtVIP2, VIRE2 interacting protein
2		 0.52 0.33 -0.3
44 AT5G07200 gibberellin 20-oxidase 3 ARABIDOPSIS THALIANA GIBBERELLIN
20-OXIDASE 3, gibberellin
20-oxidase 3, YAP169		 0.52 0.31 -0.32
45 AT5G35390 Leucine-rich repeat protein kinase family protein 0.52 0.31 -0.31
46 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 0.52 0.33 -0.34
47 AT4G04530 transposable element gene -0.52 0.32 -0.28
48 C0021 ND:::GC-TOF/MS 1-Aminocyclopropane-1-carboxylic
acid, -,
1-Aminocyclopropane-1-carboxylate		 -0.52 0.43 -0.47
49 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 0.52 0.31 -0.3
50 AT2G26490 Transducin/WD40 repeat-like superfamily protein -0.51 0.3 -0.32
51 AT1G25540 phytochrome and flowering time regulatory protein (PFT1) mediator 25, PHYTOCHROME AND
FLOWERING TIME 1		 0.51 0.32 -0.3
52 AT5G50830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: L mature pollen stage, M
germinated pollen stage, 4 anthesis, C globular stage,
petal differentiation and expansion stage; Has 4984 Blast
hits to 3288 proteins in 342 species: Archae - 12; Bacteria
- 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses -
77; Other Eukaryotes - 2621 (source: NCBI BLink).		 0.51 0.33 -0.31
53 AT5G56900 CwfJ-like family protein / zinc finger (CCCH-type) family
protein		 0.51 0.31 -0.32
54 AT4G09860 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.3
55 AT2G21040 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.5 0.3 -0.33
56 AT3G60700 Protein of unknown function (DUF1163) 0.5 0.31 -0.3
57 AT2G30860 glutathione S-transferase PHI 9 ATGSTF7, glutathione S-transferase
PHI 9, GLUTTR, glutathione
S-transferase PHI 9		 -0.5 0.32 -0.32
58 AT4G33410 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1,
SIGNAL PEPTIDE PEPTIDASE-LIKE 1		 0.5 0.34 -0.31
59 AT2G23460 extra-large G-protein 1 ATXLG1, extra-large G-protein 1 0.5 0.32 -0.29
60 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.5 0.32 -0.31
61 AT3G62480 transposable element gene -0.5 0.31 -0.32
62 AT3G04050 Pyruvate kinase family protein 0.5 0.31 -0.31
63 AT4G21690 gibberellin 3-oxidase 3 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 3, gibberellin 3-oxidase
3		 0.49 0.31 -0.3
64 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.34 -0.36
65 AT1G63450 root hair specific 8 root hair specific 8 -0.48 0.34 -0.32
66 AT1G10800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: inflorescence meristem,
hypocotyl, root, flower; EXPRESSED DURING: petal
differentiation and expansion stage; Has 23 Blast hits to
23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 -0.48 0.31 -0.33
67 AT1G36000 LOB domain-containing protein 5 LOB domain-containing protein 5 -0.47 0.32 -0.31
68 AT3G57620 glyoxal oxidase-related protein -0.47 0.31 -0.36
69 AT2G26720 Cupredoxin superfamily protein -0.46 0.32 -0.31
70 AT4G30120 heavy metal atpase 3 A. THALIANA HEAVY METAL ATPASE 3,
heavy metal atpase 3		 -0.46 0.3 -0.3
71 AT5G38400 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.46 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.63 0.44 -0.41 C0035