AT5G54580 : -
Query Information
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AGICode AT5G54580
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.3 -0.3
2 AT2G34160 Alba DNA/RNA-binding protein 0.82 0.33 -0.31
3 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 0.81 0.31 -0.3
4 AT5G15640 Mitochondrial substrate carrier family protein 0.8 0.32 -0.31
5 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.8 0.29 -0.31
6 AT4G04950 thioredoxin family protein Arabidopsis thaliana monothiol
glutaredoxin 17, monothiol
glutaredoxin 17		 0.79 0.3 -0.31
7 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.78 0.3 -0.33
8 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.78 0.31 -0.31
9 AT5G63220 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0363
(InterPro:IPR007317); Has 304 Blast hits to 301 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38
(source: NCBI BLink).		 0.78 0.3 -0.32
10 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.77 0.3 -0.32
11 AT1G28210 DNAJ heat shock family protein ATJ1 0.76 0.31 -0.32
12 AT5G42150 Glutathione S-transferase family protein 0.76 0.3 -0.32
13 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 0.75 0.31 -0.32
14 AT1G03860 prohibitin 2 prohibitin 2, prohibitin 2 0.75 0.31 -0.3
15 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.34 -0.31
16 AT1G30580 GTP binding 0.75 0.32 -0.3
17 AT5G06410 DNAJ heat shock N-terminal domain-containing protein 0.75 0.3 -0.3
18 AT2G04040 MATE efflux family protein ATDTX1, detoxification 1, TX1 0.74 0.31 -0.3
19 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 -0.74 0.32 -0.3
20 AT1G15860 Domain of unknown function (DUF298) 0.74 0.33 -0.34
21 AT3G09350 Fes1A Fes1A 0.74 0.3 -0.31
22 AT3G52390 TatD related DNase 0.73 0.32 -0.29
23 AT1G16740 Ribosomal protein L20 0.73 0.31 -0.31
24 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.73 0.32 -0.31
25 AT2G19680 Mitochondrial ATP synthase subunit G protein 0.73 0.31 -0.3
26 AT5G58920 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.73 0.31 -0.32
27 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.73 0.31 -0.33
28 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.31
29 AT2G43780 unknown protein; Has 30 Blast hits to 30 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.31 -0.31
30 AT3G19630 Radical SAM superfamily protein 0.72 0.33 -0.32
31 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 0.72 0.33 -0.3
32 AT5G09270 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.32 -0.31
33 AT4G02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0.72 0.31 -0.32
34 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.72 0.32 -0.3
35 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.72 0.32 -0.3
36 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.31 -0.32
37 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.72 0.3 -0.31
38 AT4G31080 Protein of unknown function (DUF2296) 0.72 0.31 -0.32
39 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1		 0.72 0.36 -0.31
40 AT3G06310 Cox19-like CHCH family protein 0.71 0.33 -0.31
41 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.71 0.32 -0.33
42 AT2G16365 F-box family protein 0.71 0.33 -0.34
43 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.71 0.31 -0.32
44 AT2G40765 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.32 -0.31
45 AT1G64750 deletion of SUV3 suppressor 1(I) deletion of SUV3 suppressor 1(I),
deletion of SUV3 suppressor 1(I)		 0.71 0.34 -0.31
46 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.7 0.32 -0.31
47 AT4G25280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.31 -0.34
48 AT1G32580 plastid developmental protein DAG, putative 0.7 0.3 -0.32
49 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.7 0.28 -0.3
50 AT1G71730 unknown protein; Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.7 0.31 -0.31
51 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.7 0.33 -0.32
52 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.7 0.3 -0.32
53 AT4G12240 zinc finger (C2H2 type) family protein 0.69 0.32 -0.29
54 AT3G43510 transposable element gene 0.69 0.32 -0.33
55 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.69 0.32 -0.32
56 AT1G12650 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF947 (InterPro:IPR009292); Has 700 Blast
hits to 631 proteins in 192 species: Archae - 0; Bacteria -
32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0;
Other Eukaryotes - 302 (source: NCBI BLink).		 0.69 0.31 -0.32
57 AT1G53070 Legume lectin family protein -0.69 0.32 -0.31
58 AT1G13260 related to ABI3/VP1 1 ETHYLENE RESPONSE DNA BINDING
FACTOR 4, related to ABI3/VP1 1		 0.68 0.3 -0.33
59 AT5G48470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.29 -0.3
60 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.68 0.32 -0.33
61 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.68 0.31 -0.3
62 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.67 0.33 -0.31
63 AT5G63150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1713, mitochondria
(InterPro:IPR013177); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.34 -0.33
64 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.67 0.32 -0.32
65 AT3G09410 Pectinacetylesterase family protein -0.67 0.31 -0.31
66 AT5G51940 RNA polymerase Rpb6 NRPB6A, NRPD6A, NRPE6A 0.67 0.32 -0.29
67 AT4G34560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits
to 66 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.29
68 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.31 -0.3
69 AT1G67750 Pectate lyase family protein -0.64 0.31 -0.32
70 AT1G22540 Major facilitator superfamily protein -0.63 0.31 -0.32
71 AT1G29240 Protein of unknown function (DUF688) -0.63 0.31 -0.3
72 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.3 -0.31
73 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 -0.62 0.3 -0.33
74 AT5G51970 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.61 0.32 -0.29
75 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.31 -0.3
76 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 -0.61 0.33 -0.31
77 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.59 0.31 -0.32
78 AT5G07080 HXXXD-type acyl-transferase family protein -0.58 0.31 -0.31
79 AT5G49120 Protein of unknown function (DUF581) -0.58 0.29 -0.31
80 AT2G46640 unknown protein; Has 19 Blast hits to 19 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.57 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0215 PR_MST_2527.1 - - - 0.77 0.43 -0.46
82 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		0.67 0.3 -0.33