AT5G54600 : -
Query Information
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AGICode AT5G54600
Description Translation protein SH3-like family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54600 Translation protein SH3-like family protein 1 0.31 -0.31
2 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.94 0.3 -0.3
3 AT2G33450 Ribosomal L28 family 0.94 0.32 -0.31
4 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.93 0.31 -0.29
5 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.93 0.31 -0.33
6 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.93 0.3 -0.32
7 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.93 0.31 -0.32
8 AT3G08740 elongation factor P (EF-P) family protein 0.92 0.31 -0.29
9 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.92 0.34 -0.33
10 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.3 -0.32
11 AT2G43030 Ribosomal protein L3 family protein 0.92 0.32 -0.33
12 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.92 0.32 -0.31
13 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.92 0.31 -0.31
14 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.92 0.32 -0.31
15 AT4G17560 Ribosomal protein L19 family protein 0.91 0.31 -0.31
16 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.91 0.32 -0.31
17 AT1G06190 Rho termination factor 0.9 0.3 -0.31
18 AT3G54210 Ribosomal protein L17 family protein 0.9 0.32 -0.32
19 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.9 0.3 -0.33
20 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.9 0.3 -0.32
21 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.9 0.32 -0.32
22 AT5G65220 Ribosomal L29 family protein 0.9 0.31 -0.31
23 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.9 0.32 -0.33
24 AT3G12930 Lojap-related protein 0.9 0.32 -0.34
25 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.9 0.29 -0.31
26 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.9 0.3 -0.32
27 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.89 0.31 -0.32
28 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.3 -0.3
29 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.89 0.33 -0.32
30 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.89 0.34 -0.31
31 AT1G43560 thioredoxin Y2 thioredoxin Y2, thioredoxin Y2 0.89 0.32 -0.33
32 AT1G14270 CAAX amino terminal protease family protein 0.89 0.31 -0.3
33 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.89 0.31 -0.31
34 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.89 0.32 -0.3
35 AT2G24090 Ribosomal protein L35 0.89 0.32 -0.3
36 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.31 -0.3
37 AT3G19810 Protein of unknown function (DUF177) 0.89 0.31 -0.33
38 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.32 -0.32
39 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.89 0.32 -0.32
40 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.89 0.34 -0.31
41 AT3G51140 Protein of unknown function (DUF3353) 0.89 0.34 -0.33
42 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.88 0.29 -0.34
43 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.88 0.32 -0.32
44 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.88 0.32 -0.31
45 AT1G36390 Co-chaperone GrpE family protein 0.88 0.31 -0.32
46 AT5G47190 Ribosomal protein L19 family protein 0.88 0.32 -0.3
47 AT1G29070 Ribosomal protein L34 0.88 0.32 -0.32
48 AT2G21860 violaxanthin de-epoxidase-related 0.88 0.31 -0.31
49 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.31 -0.34
50 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.88 0.31 -0.33
51 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.88 0.3 -0.33
52 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.88 0.33 -0.31
53 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.88 0.34 -0.35
54 AT4G36390 Methylthiotransferase 0.87 0.32 -0.33
55 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.87 0.31 -0.3
56 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.32 -0.32
57 AT3G60750 Transketolase 0.87 0.3 -0.3
58 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.87 0.3 -0.32
59 AT3G17210 heat stable protein 1 A. THALIANA HEAT STABLE PROTEIN 1,
heat stable protein 1		 0.87 0.31 -0.32
60 AT4G37510 Ribonuclease III family protein 0.87 0.31 -0.31
61 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.87 0.32 -0.32
62 AT4G37040 methionine aminopeptidase 1D methionine aminopeptidase 1D 0.87 0.32 -0.31
63 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.87 0.3 -0.3
64 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.87 0.31 -0.34
65 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.86 0.35 -0.31
66 AT4G01310 Ribosomal L5P family protein 0.86 0.33 -0.32
67 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.86 0.31 -0.33
68 AT1G60230 Radical SAM superfamily protein 0.86 0.32 -0.33
69 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.86 0.35 -0.31
70 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.86 0.33 -0.31
71 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.86 0.32 -0.31
72 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.86 0.3 -0.32
73 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.86 0.32 -0.32
74 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.86 0.32 -0.3
75 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.86 0.31 -0.29
76 AT5G46420 16S rRNA processing protein RimM family 0.86 0.31 -0.32
77 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.85 0.32 -0.33
78 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.85 0.32 -0.31
79 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.85 0.33 -0.33
80 AT5G47110 Chlorophyll A-B binding family protein LIL3:2 0.85 0.3 -0.31
81 AT3G52960 Thioredoxin superfamily protein 0.85 0.32 -0.33
82 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.85 0.31 -0.32
83 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.85 0.31 -0.32
84 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.85 0.32 -0.29
85 AT1G51100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 26
Blast hits to 26 proteins in 9 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.31 -0.32
86 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 0.85 0.3 -0.3
87 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.75 0.37 -0.31
88 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.32 -0.32
89 AT5G38030 MATE efflux family protein -0.72 0.32 -0.33
90 AT5G49880 mitotic checkpoint family protein -0.71 0.3 -0.35
91 AT5G38020 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.32 -0.29
92 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.63 0.32 -0.31
93 AT1G78780 pathogenesis-related family protein -0.62 0.32 -0.33
94 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.62 0.31 -0.33
95 AT5G22570 WRKY DNA-binding protein 38 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 38, WRKY
DNA-binding protein 38		 -0.61 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.77 0.43 -0.46 C0051