AT5G54290 : CcdA
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G54290
Description cytochrome c biogenesis protein family
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54290 cytochrome c biogenesis protein family CcdA 1 0.3 -0.31
2 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.9 0.32 -0.31
3 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.89 0.31 -0.32
4 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.89 0.29 -0.31
5 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.89 0.31 -0.3
6 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 0.88 0.29 -0.32
7 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.88 0.31 -0.3
8 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.87 0.29 -0.32
9 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.87 0.31 -0.32
10 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.87 0.33 -0.31
11 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.87 0.31 -0.31
12 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.86 0.32 -0.3
13 AT5G64460 Phosphoglycerate mutase family protein 0.86 0.31 -0.3
14 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.86 0.31 -0.33
15 AT5G43750 NAD(P)H dehydrogenase 18 NAD(P)H dehydrogenase 18,
Photosynthetic NDH subcomplex B 5		 0.85 0.32 -0.35
16 AT2G20260 photosystem I subunit E-2 photosystem I subunit E-2 0.85 0.31 -0.32
17 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.85 0.32 -0.32
18 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.31 -0.31
19 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.84 0.34 -0.3
20 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.84 0.31 -0.32
21 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.84 0.3 -0.3
22 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.84 0.31 -0.33
23 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 0.84 0.31 -0.31
24 AT1G64150 Uncharacterized protein family (UPF0016) 0.84 0.33 -0.32
25 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.32 -0.32
26 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.84 0.3 -0.31
27 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.84 0.34 -0.32
28 AT3G43540 Protein of unknown function (DUF1350) 0.84 0.31 -0.3
29 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.84 0.31 -0.32
30 AT5G59250 Major facilitator superfamily protein 0.84 0.31 -0.33
31 AT1G79040 photosystem II subunit R photosystem II subunit R 0.83 0.31 -0.3
32 AT4G24090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 144 Blast hits to 142
proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa
- 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes
- 15 (source: NCBI BLink).		 0.83 0.29 -0.33
33 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 0.83 0.31 -0.31
34 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2		 0.83 0.3 -0.31
35 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.82 0.29 -0.31
36 AT1G12250 Pentapeptide repeat-containing protein 0.82 0.31 -0.31
37 AT3G27050 unknown protein; Has 43 Blast hits to 43 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.82 0.31 -0.31
38 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.82 0.3 -0.31
39 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.82 0.33 -0.33
40 AT2G03390 uvrB/uvrC motif-containing protein 0.82 0.31 -0.32
41 AT4G18740 Rho termination factor 0.82 0.32 -0.33
42 AT1G05140 Peptidase M50 family protein 0.82 0.32 -0.33
43 AT4G13670 plastid transcriptionally active 5 plastid transcriptionally active 5 0.81 0.32 -0.33
44 AT2G35450 catalytics;hydrolases 0.81 0.32 -0.28
45 AT5G48790 Domain of unknown function (DUF1995) 0.81 0.31 -0.34
46 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.81 0.31 -0.32
47 AT5G59750 DHBP synthase RibB-like alpha/beta domain;GTP
cyclohydrolase II		 0.81 0.31 -0.31
48 AT1G22850 SNARE associated Golgi protein family 0.81 0.31 -0.32
49 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.81 0.3 -0.34
50 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 -0.77 0.32 -0.32
51 AT4G37940 AGAMOUS-like 21 AGAMOUS-like 21 -0.71 0.33 -0.32
52 AT3G29310 calmodulin-binding protein-related -0.71 0.33 -0.32
53 AT5G18950 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.33
54 AT1G35790 transposable element gene -0.64 0.32 -0.31
55 AT1G69600 zinc finger homeodomain 1 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 29, zinc finger
homeodomain 1, ZINC FINGER
HOMEODOMAIN 11		 -0.63 0.32 -0.33
56 AT2G19110 heavy metal atpase 4 ARABIDOPSIS HEAVY METAL ATPASE 4,
heavy metal atpase 4		 -0.62 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
57 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.82 0.51 -0.5 C0241