AT5G54090 : -
Query Information
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AGICode AT5G54090
Description DNA mismatch repair protein MutS, type 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54090 DNA mismatch repair protein MutS, type 2 1 0.32 -0.34
2 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 0.78 0.32 -0.32
3 AT1G67690 Zincin-like metalloproteases family protein 0.74 0.32 -0.32
4 AT2G33820 Mitochondrial substrate carrier family protein ATMBAC1, MBAC1 0.73 0.29 -0.29
5 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.72 0.31 -0.34
6 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.7 0.31 -0.32
7 AT5G24340 3'-5' exonuclease domain-containing protein 0.69 0.33 -0.3
8 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 0.69 0.31 -0.32
9 AT1G55270 Galactose oxidase/kelch repeat superfamily protein 0.68 0.31 -0.32
10 AT3G17100 sequence-specific DNA binding transcription factors -0.68 0.33 -0.33
11 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 0.68 0.31 -0.29
12 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 -0.67 0.31 -0.31
13 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 0.67 0.31 -0.35
14 AT1G16680 Chaperone DnaJ-domain superfamily protein 0.66 0.32 -0.31
15 AT5G40660 ATP12 protein-related -0.66 0.31 -0.32
16 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.66 0.3 -0.33
17 AT1G35330 RING/U-box superfamily protein -0.66 0.32 -0.29
18 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein 0.66 0.33 -0.33
19 AT2G38480 Uncharacterised protein family (UPF0497) -0.66 0.29 -0.29
20 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 0.66 0.29 -0.3
21 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.66 0.32 -0.32
22 AT1G79880 RNA recognition motif (RRM)-containing protein 0.66 0.34 -0.32
23 AT5G58500 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 5 -0.66 0.32 -0.31
24 AT5G42090 Lung seven transmembrane receptor family protein -0.65 0.31 -0.29
25 AT5G20650 copper transporter 5 copper transporter 5 -0.65 0.34 -0.32
26 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 0.65 0.36 -0.33
27 AT2G46140 Late embryogenesis abundant protein -0.65 0.3 -0.33
28 AT1G70430 Protein kinase superfamily protein 0.65 0.32 -0.32
29 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.31 -0.32
30 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 -0.65 0.31 -0.3
31 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.64 0.32 -0.32
32 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.64 0.33 -0.31
33 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.31 -0.31
34 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.64 0.31 -0.32
35 AT1G60160 Potassium transporter family protein 0.64 0.33 -0.32
36 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.3 -0.3
37 AT2G30920 coenzyme Q 3 coenzyme Q 3, COQ3, coenzyme Q 3,
embryo defective 3002		 -0.63 0.32 -0.32
38 AT1G51070 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 115 -0.63 0.32 -0.34
39 AT1G27520 Glycosyl hydrolase family 47 protein 0.63 0.32 -0.3
40 AT3G10890 Glycosyl hydrolase superfamily protein -0.62 0.31 -0.33
41 AT1G63110 GPI transamidase subunit PIG-U -0.62 0.29 -0.29
42 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.62 0.3 -0.3
43 AT4G39660 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate
aminotransferase 2		 -0.62 0.3 -0.32
44 AT1G79340 metacaspase 4 metacaspase 4, metacaspase 2d,
metacaspase 4, metacaspase 2d		 -0.62 0.32 -0.34
45 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.3 -0.3
46 AT1G13230 Leucine-rich repeat (LRR) family protein 0.62 0.3 -0.3
47 AT3G53370 S1FA-like DNA-binding protein -0.61 0.31 -0.34
48 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.31 -0.33
49 AT5G17150 Cystatin/monellin superfamily protein 0.61 0.32 -0.31
50 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.61 0.32 -0.32
51 AT4G01400 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4
transport (InterPro:IPR013167), Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 26268 Blast hits to 8959
proteins in 289 species: Archae - 0; Bacteria - 3; Metazoa
- 247; Fungi - 222; Plants - 25350; Viruses - 0; Other
Eukaryotes - 446 (source: NCBI BLink).		 -0.6 0.32 -0.3
52 AT4G26280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.31 -0.29
53 AT1G68680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 16 growth stages; Has 20 Blast hits to 20 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.3 -0.33
54 AT2G40250 SGNH hydrolase-type esterase superfamily protein -0.6 0.3 -0.32
55 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 0.6 0.31 -0.32
56 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 -0.6 0.31 -0.3
57 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 0.59 0.31 -0.32
58 AT3G13780 SMAD/FHA domain-containing protein -0.59 0.34 -0.3
59 AT5G57230 Thioredoxin superfamily protein -0.59 0.33 -0.31
60 AT3G03360 F-box/RNI-like superfamily protein 0.59 0.32 -0.31
61 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.59 0.32 -0.33
62 AT3G56550 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.31
63 AT5G43320 casein kinase I-like 8 casein kinase I-like 8 -0.59 0.31 -0.32
64 AT1G66310 F-box/RNI-like/FBD-like domains-containing protein 0.58 0.31 -0.33
65 AT2G10050 transposable element gene 0.58 0.31 -0.31
66 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.58 0.32 -0.33
67 AT5G52250 Transducin/WD40 repeat-like superfamily protein EARLY FLOWERING BY OVEREXPRESSION
1, REPRESSOR OF UV-B
PHOTOMORPHOGENESIS 1		 -0.58 0.31 -0.32
68 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase -0.58 0.32 -0.29
69 AT1G10990 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.34 -0.32
70 AT1G15100 RING-H2 finger A2A RING-H2 finger A2A -0.58 0.3 -0.3
71 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 -0.57 0.34 -0.33
72 AT1G52770 Phototropic-responsive NPH3 family protein 0.57 0.3 -0.3
73 AT5G51740 Peptidase family M48 family protein -0.57 0.34 -0.32
74 AT1G04730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMOSOME TRANSMISSION FIDELITY
18		 0.57 0.33 -0.31
75 AT5G15890 TRICHOME BIREFRINGENCE-LIKE 21 TRICHOME BIREFRINGENCE-LIKE 21 -0.57 0.31 -0.32
76 AT1G73320 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.57 0.34 -0.31
77 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 0.57 0.31 -0.32
78 AT5G43730 Disease resistance protein (CC-NBS-LRR class) family -0.57 0.31 -0.31
79 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 0.57 0.31 -0.33
80 AT1G18970 germin-like protein 4 germin-like protein 4 -0.56 0.3 -0.32
81 AT1G73690 cyclin-dependent kinase D1;1 CYCLIN-DEPENDENT KINASE D1,
CAK3AT, cyclin-dependent kinase
D1;1		 -0.56 0.31 -0.33
82 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 -0.56 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0124 Isonicotinic acid - - - 0.65 0.48 -0.45