AT5G54180 : plastid transcriptionally active 15
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G54180
Description plastid transcriptionally active 15
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 1 0.3 -0.31
2 AT3G12930 Lojap-related protein 0.91 0.32 -0.32
3 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.9 0.3 -0.33
4 AT4G37510 Ribonuclease III family protein 0.9 0.3 -0.31
5 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.32 -0.31
6 AT1G06190 Rho termination factor 0.89 0.31 -0.31
7 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.89 0.31 -0.31
8 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.89 0.31 -0.34
9 AT5G55220 trigger factor type chaperone family protein 0.89 0.32 -0.33
10 AT1G14270 CAAX amino terminal protease family protein 0.89 0.31 -0.31
11 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.31 -0.32
12 AT2G39670 Radical SAM superfamily protein 0.89 0.32 -0.32
13 AT4G26370 antitermination NusB domain-containing protein 0.88 0.31 -0.32
14 AT3G28460 methyltransferases 0.88 0.33 -0.3
15 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.88 0.32 -0.3
16 AT2G33450 Ribosomal L28 family 0.88 0.32 -0.31
17 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.88 0.32 -0.31
18 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.88 0.32 -0.31
19 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.87 0.34 -0.32
20 AT1G11430 plastid developmental protein DAG, putative 0.87 0.31 -0.28
21 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.87 0.3 -0.32
22 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.87 0.32 -0.32
23 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.87 0.32 -0.32
24 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.87 0.31 -0.34
25 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.87 0.29 -0.29
26 AT5G20040 isopentenyltransferase 9 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 9,
isopentenyltransferase 9		 0.86 0.32 -0.31
27 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.86 0.31 -0.31
28 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.33 -0.32
29 AT1G14410 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 1, PTAC1,
WHIRLY 1		 0.86 0.32 -0.31
30 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.86 0.32 -0.3
31 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.85 0.29 -0.29
32 AT4G34730 ribosome-binding factor A family protein 0.85 0.33 -0.32
33 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Uncharacterised
conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 translocon at the inner envelope
membrane of chloroplasts 20-V,
translocon at the inner envelope
membrane of chloroplasts 20-V		 0.85 0.3 -0.31
34 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.85 0.32 -0.32
35 AT5G42130 Mitochondrial substrate carrier family protein AtMfl1, MitoFerrinLike1 0.85 0.32 -0.31
36 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.85 0.33 -0.33
37 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.85 0.32 -0.31
38 AT3G19810 Protein of unknown function (DUF177) 0.85 0.31 -0.31
39 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.85 0.33 -0.29
40 AT3G07670 Rubisco methyltransferase family protein 0.84 0.28 -0.34
41 AT5G44190 GOLDEN2-like 2 ATGLK2, GOLDEN2-like 2, GBF'S
PRO-RICH REGION-INTERACTING FACTOR
2		 0.84 0.32 -0.31
42 AT5G50250 chloroplast RNA-binding protein 31B chloroplast RNA-binding protein
31B		 0.84 0.32 -0.32
43 AT3G52960 Thioredoxin superfamily protein 0.84 0.29 -0.32
44 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.84 0.29 -0.34
45 AT4G01690 Flavin containing amine oxidoreductase family HEMG1, PPO1, PPOX 0.84 0.31 -0.31
46 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.84 0.33 -0.31
47 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.84 0.32 -0.31
48 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.84 0.3 -0.33
49 AT2G26580 plant-specific transcription factor YABBY family protein YABBY5 0.83 0.33 -0.31
50 AT2G45560 cytochrome P450, family 76, subfamily C, polypeptide 1 cytochrome P450, family 76,
subfamily C, polypeptide 1		 0.83 0.32 -0.31
51 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.34 -0.3
52 AT2G26550 heme oxygenase 2 heme oxygenase 2 0.83 0.33 -0.32
53 AT2G22230 Thioesterase superfamily protein 0.83 0.32 -0.31
54 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 0.83 0.32 -0.32
55 AT2G21860 violaxanthin de-epoxidase-related 0.83 0.31 -0.31
56 AT3G51470 Protein phosphatase 2C family protein 0.83 0.31 -0.29
57 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.76 0.32 -0.33
58 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.76 0.34 -0.31
59 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 -0.72 0.32 -0.34
60 AT5G63930 Leucine-rich repeat protein kinase family protein -0.7 0.32 -0.32
61 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.66 0.32 -0.31
62 AT1G52950 Nucleic acid-binding, OB-fold-like protein -0.64 0.3 -0.31
63 AT4G01480 pyrophosphorylase 5 pyrophosphorylase 5,
pyrophosphorylase 5		 -0.64 0.31 -0.34
64 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.64 0.31 -0.3
65 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 -0.63 0.3 -0.3
66 AT3G21420 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 LATERAL BRANCHING OXIDOREDUCTASE 1 -0.63 0.33 -0.33