AT5G53840 : -
Query Information
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AGICode AT5G53840
Description F-box/RNI-like/FBD-like domains-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53840 F-box/RNI-like/FBD-like domains-containing protein 1 0.32 -0.32
2 AT5G43180 Protein of unknown function, DUF599 -0.72 0.35 -0.29
3 AT1G43870 transposable element gene 0.7 0.31 -0.31
4 AT2G05610 transposable element gene 0.66 0.31 -0.32
5 AT4G02195 syntaxin of plants 42 ATSYP42, ATTLG2B, syntaxin of
plants 42, TLG2B		 0.65 0.33 -0.29
6 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.64 0.33 -0.32
7 AT5G52140 RING/U-box superfamily protein 0.63 0.3 -0.32
8 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 0.62 0.3 -0.32
9 AT1G74810 HCO3- transporter family BOR5 0.61 0.29 -0.3
10 AT5G25840 Protein of unknown function (DUF1677) 0.61 0.3 -0.3
11 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D -0.61 0.31 -0.32
12 AT1G34080 transposable element gene -0.61 0.29 -0.31
13 AT3G43950 Protein kinase superfamily protein 0.61 0.33 -0.3
14 AT4G31680 Transcriptional factor B3 family protein 0.61 0.3 -0.31
15 AT5G62420 NAD(P)-linked oxidoreductase superfamily protein 0.61 0.32 -0.29
16 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 -0.61 0.3 -0.33
17 AT2G23470 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 4 0.6 0.32 -0.32
18 AT1G19630 cytochrome P450, family 722, subfamily A, polypeptide 1 cytochrome P450, family 722,
subfamily A, polypeptide 1		 0.6 0.33 -0.31
19 AT2G23240 Plant EC metallothionein-like protein, family 15 Arabidopsis thaliana
metallothionein 4b		 -0.6 0.3 -0.32
20 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 -0.6 0.31 -0.33
21 AT5G54640 Histone superfamily protein ATHTA1, histone H2A 1, RESISTANT
TO AGROBACTERIUM TRANSFORMATION 5		 0.59 0.31 -0.3
22 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.3 -0.31
23 AT5G29090 transposable element gene 0.59 0.32 -0.33
24 AT1G26410 FAD-binding Berberine family protein 0.59 0.3 -0.31
25 AT3G53080 D-galactoside/L-rhamnose binding SUEL lectin protein 0.58 0.31 -0.35
26 AT2G28440 proline-rich family protein -0.58 0.3 -0.32
27 AT2G07300 transposable element gene 0.58 0.3 -0.31
28 AT1G77780 Glycosyl hydrolase superfamily protein 0.58 0.33 -0.31
29 AT1G48940 early nodulin-like protein 6 AtENODL6, early nodulin-like
protein 6		 0.58 0.31 -0.29
30 AT1G80740 chromomethylase 1 chromomethylase 1, DNA
METHYLTRANSFERASE 4		 0.58 0.33 -0.31
31 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.58 0.32 -0.3
32 AT2G20625 Protein of unknown function (DUF626) 0.58 0.32 -0.3
33 AT5G60320 Concanavalin A-like lectin protein kinase family protein 0.57 0.3 -0.32
34 AT1G32030 Domain of unknown function (DUF313) -0.57 0.31 -0.33
35 AT3G28280 BEST Arabidopsis thaliana protein match is: F-box family
protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to
100 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.29
36 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.33 -0.33
37 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.57 0.3 -0.32
38 AT3G16550 DEGP protease 12 DEGP protease 12 -0.57 0.34 -0.32
39 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 -0.57 0.29 -0.32
40 AT3G60470 Plant protein of unknown function (DUF247) 0.57 0.28 -0.32
41 AT4G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.33 -0.31
42 AT5G05790 Duplicated homeodomain-like superfamily protein -0.57 0.32 -0.34
43 AT2G06630 transposable element gene -0.56 0.31 -0.32
44 AT4G07350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G40129.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.56 0.31 -0.32
45 AT3G06895 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.33
46 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 0.56 0.3 -0.33
47 AT3G16950 lipoamide dehydrogenase 1 lipoamide dehydrogenase 1, ptlpd1 -0.56 0.29 -0.3
48 AT5G10530 Concanavalin A-like lectin protein kinase family protein 0.56 0.33 -0.32
49 AT2G16835 Aquaporin-like superfamily protein -0.55 0.33 -0.33
50 AT5G66250 kinectin-related 0.55 0.33 -0.32
51 AT1G02680 TBP-associated factor 13 TBP-associated factor 13 0.55 0.3 -0.32
52 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.55 0.29 -0.32
53 AT3G42340 transposable element gene 0.55 0.33 -0.33
54 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 0.55 0.33 -0.29
55 AT3G42590 transposable element gene 0.55 0.32 -0.32
56 AT3G30560 transposable element gene 0.55 0.31 -0.34
57 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 0.55 0.31 -0.3
58 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 0.55 0.32 -0.32
59 AT4G30090 embryo defective 1353 0.55 0.29 -0.31
60 AT1G47220 Cyclin A3;3 Cyclin A3;3 0.55 0.31 -0.31
61 AT3G21660 UBX domain-containing protein 0.54 0.34 -0.3
62 AT3G14470 NB-ARC domain-containing disease resistance protein 0.54 0.33 -0.3
63 AT2G04830 Protein of unknown function (DUF295) -0.54 0.33 -0.32
64 AT4G39870 TLD-domain containing nucleolar protein 0.54 0.32 -0.31
65 AT3G11110 RING/U-box superfamily protein 0.54 0.3 -0.34
66 ATCG00330 chloroplast ribosomal protein S14 chloroplast ribosomal protein S14 0.54 0.32 -0.29
67 AT3G17690 cyclic nucleotide gated channel 19 CYCLIC NUCLEOTIDE-GATED CHANNEL
19, cyclic nucleotide gated
channel 19		 0.54 0.32 -0.31
68 AT5G28470 Major facilitator superfamily protein 0.54 0.32 -0.31
69 AT4G16050 Aminotransferase-like, plant mobile domain family protein -0.54 0.29 -0.32
70 AT1G77655 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.54 0.33 -0.32
71 AT1G61440 S-locus lectin protein kinase family protein 0.54 0.3 -0.3
72 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 -0.53 0.31 -0.31
73 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.33 -0.31
74 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.31 -0.31
75 AT5G63900 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.53 0.32 -0.3
76 AT1G73400 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.32 -0.3
77 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 0.53 0.31 -0.31
78 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 -0.53 0.32 -0.31
79 AT4G18180 Pectin lyase-like superfamily protein -0.53 0.31 -0.3
80 AT2G47300 ribonuclease Ps 0.53 0.31 -0.31
81 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 -0.52 0.32 -0.32
82 AT3G20550 SMAD/FHA domain-containing protein DAWDLE 0.52 0.31 -0.32
83 AT4G24860 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.52 0.35 -0.32
84 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 -0.52 0.32 -0.3
85 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.52 0.31 -0.31
86 AT5G61550 U-box domain-containing protein kinase family protein -0.52 0.31 -0.28
87 AT3G14860 NHL domain-containing protein -0.52 0.33 -0.33
88 AT2G20170 Protein of Unknown Function (DUF239) -0.52 0.3 -0.3
89 AT1G22010 unknown protein; Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.31 -0.3
90 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.52 0.33 -0.3
91 AT4G38480 Transducin/WD40 repeat-like superfamily protein 0.52 0.32 -0.3
92 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 0.51 0.31 -0.3
93 AT4G05250 Ubiquitin-like superfamily protein 0.51 0.3 -0.33
94 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.51 0.3 -0.33
95 AT5G09940 Protein of unknown function (DUF1635) 0.51 0.31 -0.3
96 AT1G08210 Eukaryotic aspartyl protease family protein -0.51 0.32 -0.31
97 AT1G33250 Protein of unknown function (DUF604) -0.51 0.31 -0.31
98 AT5G40290 HD domain-containing metal-dependent phosphohydrolase
family protein		 0.5 0.32 -0.3
99 AT1G07705 NOT2 / NOT3 / NOT5 family -0.5 0.31 -0.31
100 AT5G43670 Sec23/Sec24 protein transport family protein -0.5 0.32 -0.32
101 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.33 -0.3
102 AT3G13772 transmembrane nine 7 AtTMN7, transmembrane nine 7 -0.5 0.32 -0.32
103 AT2G15340 glycine-rich protein -0.5 0.3 -0.31
104 AT1G12040 leucine-rich repeat/extensin 1 leucine-rich repeat/extensin 1 -0.49 0.34 -0.29
105 AT3G60330 H(+)-ATPase 7 H(+)-ATPase 7, H(+)-ATPase 7 -0.49 0.32 -0.29
106 AT2G42090 actin 9 actin 9 -0.49 0.31 -0.29
107 AT4G10130 DNAJ heat shock N-terminal domain-containing protein -0.49 0.3 -0.33
108 AT4G15720 Tetratricopeptide repeat (TPR)-like superfamily protein -0.48 0.33 -0.32
109 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.48 0.32 -0.34
110 AT3G26190 cytochrome P450, family 71, subfamily B, polypeptide 21 cytochrome P450, family 71,
subfamily B, polypeptide 21		 -0.48 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.71 0.53 -0.51 C0199
112 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		-0.66 0.5 -0.5 C0208
113 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine -0.65 0.4 -0.45 C0025
114 C0127 Isorhamnetin-hexosyl-rhamnoside - - - -0.62 0.44 -0.43
115 C0122 Isohexylglucosinolate - - - -0.57 0.35 -0.3