AT5G53860 : embryo defective 2737
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G53860
Description embryo defective 2737
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53860 embryo defective 2737 embryo defective 2737, EMBRYO
DEFECTIVE 64		 1 0.32 -0.34
2 AT3G18870 Mitochondrial transcription termination factor family
protein		 0.84 0.29 -0.3
3 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.84 0.33 -0.33
4 AT2G39290 phosphatidylglycerolphosphate synthase 1 phosphatidylglycerolphosphate
synthase 1,
PHOSPHATIDYLGLYCEROLPHOSPHATE
SYNTHASE 1, PGS1		 0.82 0.33 -0.32
5 AT2G34590 Transketolase family protein 0.8 0.31 -0.3
6 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.77 0.29 -0.31
7 AT1G14720 xyloglucan endotransglucosylase/hydrolase 28 ATXTH28, ENDOXYLOGLUCAN
TRANSFERASE A2, xyloglucan
endotransglucosylase/hydrolase 28,
xyloglucan endotransglycosylase
related 2		 0.77 0.34 -0.3
8 AT3G20320 trigalactosyldiacylglycerol2 ATP-binding cassette I15,
trigalactosyldiacylglycerol2		 0.77 0.3 -0.3
9 AT2G43360 Radical SAM superfamily protein BIOTIN AUXOTROPH 2, BIOTIN
AUXOTROPH B		 0.76 0.32 -0.3
10 AT3G21200 proton gradient regulation 7 proton gradient regulation 7 0.76 0.34 -0.32
11 AT5G66055 ankyrin repeat protein ankyrin repeat protein, EMBRYO
DEFECTIVE 16, EMBRYO DEFECTIVE
2036		 0.76 0.31 -0.32
12 AT3G25410 Sodium Bile acid symporter family 0.76 0.32 -0.31
13 AT1G63610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast
hits to 411 proteins in 100 species: Archae - 0; Bacteria -
231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0;
Other Eukaryotes - 212 (source: NCBI BLink).		 0.76 0.32 -0.31
14 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.75 0.3 -0.33
15 AT4G09620 Mitochondrial transcription termination factor family
protein		 0.74 0.3 -0.31
16 AT3G55360 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATTSC13, ECERIFERUM 10, ENOYL-COA
REDUCTASE, TSC13		 0.73 0.3 -0.31
17 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.73 0.33 -0.31
18 AT2G26870 non-specific phospholipase C2 non-specific phospholipase C2 0.73 0.29 -0.3
19 AT3G49910 Translation protein SH3-like family protein 0.72 0.3 -0.3
20 AT2G36240 pentatricopeptide (PPR) repeat-containing protein 0.72 0.31 -0.32
21 AT4G28590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match is:
Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114
Blast hits to 112 proteins in 39 species: Archae - 2;
Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses
- 0; Other Eukaryotes - 22 (source: NCBI BLink).		 Mesophyll-cell RNAi Library line 7 0.72 0.33 -0.33
22 AT4G25750 ABC-2 type transporter family protein ATP-binding cassette G4 0.72 0.33 -0.32
23 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.68 0.3 -0.31
24 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.67 0.32 -0.32
25 AT5G65240 Leucine-rich repeat protein kinase family protein -0.65 0.33 -0.3
26 AT2G03460 Galactose oxidase/kelch repeat superfamily protein -0.65 0.32 -0.31
27 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.65 0.32 -0.31
28 AT5G65600 Concanavalin A-like lectin protein kinase family protein -0.64 0.31 -0.3
29 AT1G05577 Domain of unknown function (DUF966) -0.64 0.33 -0.3
30 AT2G03200 Eukaryotic aspartyl protease family protein -0.64 0.33 -0.31
31 AT5G49350 Glycine-rich protein family -0.63 0.31 -0.32
32 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.62 0.32 -0.3
33 AT2G22930 UDP-Glycosyltransferase superfamily protein -0.6 0.3 -0.33
34 AT5G42600 marneral synthase marneral synthase -0.6 0.32 -0.32
35 AT5G04120 Phosphoglycerate mutase family protein -0.6 0.31 -0.29
36 AT1G78000 sulfate transporter 1;2 SELENATE RESISTANT 1, sulfate
transporter 1;2		 -0.6 0.32 -0.32
37 AT2G14100 cytochrome P450, family 705, subfamily A, polypeptide 13 cytochrome P450, family 705,
subfamily A, polypeptide 13		 -0.57 0.32 -0.3
38 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.57 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
39 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.7 0.42 -0.46 C0107