AT5G53960 : -
Query Information
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AGICode AT5G53960
Description ATP binding;DNA binding;DNA topoisomerase (ATP-hydrolyzing)s
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53960 ATP binding;DNA binding;DNA topoisomerase
(ATP-hydrolyzing)s		 1 0.32 -0.3
2 AT1G73560 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.3 -0.31
3 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.62 0.31 -0.28
4 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.6 0.32 -0.31
5 AT3G08980 Peptidase S24/S26A/S26B/S26C family protein 0.6 0.29 -0.28
6 AT1G05920 Domain of unknown function (DUF313) -0.6 0.31 -0.33
7 AT1G68940 Armadillo/beta-catenin-like repeat family protein 0.59 0.3 -0.31
8 AT3G49630 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.32 -0.31
9 AT1G77500 Protein of unknown function (DUF630 and DUF632) 0.58 0.32 -0.32
10 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.57 0.3 -0.31
11 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein -0.56 0.31 -0.33
12 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.56 0.31 -0.33
13 AT1G64010 Serine protease inhibitor (SERPIN) family protein 0.56 0.3 -0.34
14 AT3G54140 peptide transporter 1 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 1, peptide transporter
1		 -0.55 0.31 -0.34
15 AT3G10580 Homeodomain-like superfamily protein 0.55 0.3 -0.3
16 AT3G25650 SKP1-like 15 SKP1-like 15, SKP1-like 15 0.55 0.31 -0.34
17 AT5G64470 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 12 -0.55 0.3 -0.31
18 AT2G10380 transposable element gene -0.54 0.31 -0.31
19 AT1G15050 indole-3-acetic acid inducible 34 indole-3-acetic acid inducible 34 0.54 0.31 -0.33
20 AT5G65580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.32 -0.32
21 AT4G12570 ubiquitin protein ligase 5 ubiquitin protein ligase 5 0.53 0.32 -0.32
22 AT5G45810 CBL-interacting protein kinase 19 CBL-interacting protein kinase 19,
SNF1-RELATED PROTEIN KINASE 3.5		 0.53 0.31 -0.31
23 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein 0.53 0.34 -0.31
24 AT2G15600 transposable element gene -0.53 0.32 -0.34
25 AT4G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.53 0.33 -0.33
26 AT5G07200 gibberellin 20-oxidase 3 ARABIDOPSIS THALIANA GIBBERELLIN
20-OXIDASE 3, gibberellin
20-oxidase 3, YAP169		 0.52 0.32 -0.32
27 AT2G01840 transposable element gene 0.52 0.3 -0.29
28 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.52 0.33 -0.33
29 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.52 0.32 -0.32
30 AT4G04170 transposable element gene -0.52 0.32 -0.31
31 AT5G55330 MBOAT (membrane bound O-acyl transferase) family protein 0.52 0.31 -0.32
32 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.52 0.31 -0.32
33 AT2G44170 pseudogene, myristoyl-CoA:protein N-myristoyltransferase
(NMT), putative, similar to N-myristoyltransferase 1 (NMT1)
(Arabidopsis thaliana) GI:7339834; contains Pfam profiles
PF01233: Myristoyl-CoA:protein N-myristoyltransferase
N-terminal domain, PF02799: Myristoyl-CoA:protein
N-myristoyltransferase C-terminal domain; gene contains a
frameshift. This could be a pseudogene or a sequencing
error.; blastp match of 62% identity and 5.1e-121 P-value
to GP|20804654|dbj|BAB92343.1||AP003273 putative
N-myristoyl transferase {Oryza sativa (japonica
cultivar-group)}		 ARABIDOPSIS N-MYRISTOYLTRANSFERASE
2, N-myristoyltransferase 2		 0.52 0.31 -0.33
34 AT5G32540 transposable element gene -0.51 0.32 -0.32
35 AT1G60130 Mannose-binding lectin superfamily protein 0.51 0.32 -0.32
36 AT2G03520 ureide permease 4 ureide permease 4, ureide permease
4		 0.51 0.29 -0.31
37 AT5G10070 RNase L inhibitor protein-related -0.51 0.32 -0.34
38 AT2G15100 transposable element gene 0.51 0.32 -0.31
39 AT4G08220 transposable element gene 0.5 0.33 -0.34
40 AT1G06320 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.5 0.33 -0.32
41 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.3
42 AT3G15470 Transducin/WD40 repeat-like superfamily protein -0.5 0.3 -0.32
43 AT2G21070 methyltransferases FIONA1 0.5 0.32 -0.3
44 AT2G05960 transposable element gene 0.49 0.32 -0.3
45 AT1G10460 germin-like protein 7 germin-like protein 7 0.49 0.32 -0.32
46 AT2G16840 transposable element gene -0.49 0.31 -0.34
47 AT1G12700 ATP binding;nucleic acid binding;helicases RNA processing factor 1 0.49 0.29 -0.3
48 AT3G20180 Copper transport protein family -0.49 0.32 -0.32
49 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.49 0.33 -0.3
50 AT2G39160 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.33 -0.32
51 AT1G66450 Cysteine/Histidine-rich C1 domain family protein 0.49 0.31 -0.32
52 AT1G58470 RNA-binding protein 1 RNA-binding protein 1, RNA-binding
protein 1		 0.49 0.32 -0.31
53 AT4G04280 transposable element gene 0.49 0.33 -0.32
54 AT4G00870 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.48 0.34 -0.33
55 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 0.48 0.33 -0.31
56 AT2G17150 Plant regulator RWP-RK family protein 0.48 0.33 -0.33
57 AT5G56370 F-box/RNI-like/FBD-like domains-containing protein -0.48 0.29 -0.34
58 AT2G24250 Protein of unknown function (DUF295) 0.48 0.31 -0.31
59 AT5G55020 myb domain protein 120 ATMYB120, myb domain protein 120 0.48 0.33 -0.33
60 AT3G60780 Protein of unknown function (DUF1442) 0.48 0.3 -0.3
61 AT3G04750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.47 0.32 -0.32
62 AT1G69980 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30 Blast hits to 30 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.47 0.3 -0.34
63 AT1G28550 RAB GTPase homolog A1I RAB GTPase homolog A1I, RAB GTPase
homolog A1I		 -0.47 0.32 -0.31
64 AT1G11125 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G61170.1).		 0.47 0.34 -0.35
65 AT4G36440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.46 0.32 -0.32
66 AT4G10130 DNAJ heat shock N-terminal domain-containing protein 0.46 0.32 -0.32
67 AT3G47010 Glycosyl hydrolase family protein 0.46 0.33 -0.32
68 AT3G57620 glyoxal oxidase-related protein -0.45 0.33 -0.31
69 AT2G30760 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.45 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0117 Hydroxyproline (2S,4R)-Hydroxyproline 4-Hydroxy-L-proline protein precursor -0.64 0.42 -0.45 C0117