AT5G53210 : SPEECHLESS
Query Information
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AGICode AT5G53210
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPEECHLESS 1 0.32 -0.32
2 AT1G34245 Putative membrane lipoprotein EPIDERMAL PATTERNING FACTOR 2 0.91 0.34 -0.33
3 AT3G55920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.87 0.31 -0.28
4 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 0.85 0.34 -0.31
5 AT4G31805 WRKY family transcription factor 0.85 0.31 -0.33
6 AT3G49260 IQ-domain 21 IQ-domain 21 0.85 0.3 -0.33
7 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.85 0.32 -0.3
8 AT1G12430 armadillo repeat kinesin 3 armadillo repeat kinesin 3,
Arabidopsis thaliana KINESIN
Ungrouped clade, gene A,
phosphatidic acid kinase		 0.85 0.3 -0.33
9 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 0.84 0.32 -0.32
10 AT3G15300 VQ motif-containing protein -0.82 0.32 -0.33
11 AT1G14440 homeobox protein 31 homeobox protein 31, homeobox
protein 31, ZINC FINGER
HOMEODOMAIN 4		 0.82 0.3 -0.32
12 AT1G24020 MLP-like protein 423 MLP-like protein 423 0.82 0.31 -0.31
13 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.82 0.32 -0.33
14 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.81 0.31 -0.33
15 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION 0.81 0.28 -0.3
16 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.81 0.33 -0.29
17 AT1G03160 FZO-like FZO-like 0.8 0.32 -0.33
18 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.8 0.32 -0.3
19 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.79 0.3 -0.29
20 AT1G80080 Leucine-rich repeat (LRR) family protein Receptor Like Protein 17, TOO MANY
MOUTHS		 0.79 0.31 -0.31
21 AT2G20875 epidermal patterning factor 1 EPIDERMAL PATTERNING FACTOR 1 0.79 0.33 -0.32
22 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.31 -0.32
23 AT2G38330 MATE efflux family protein 0.78 0.33 -0.33
24 AT2G02070 indeterminate(ID)-domain 5 indeterminate(ID)-domain 5,
indeterminate(ID)-domain 5		 0.78 0.33 -0.34
25 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.78 0.33 -0.33
26 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.78 0.31 -0.32
27 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.78 0.36 -0.32
28 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.78 0.31 -0.33
29 AT3G15030 TCP family transcription factor 4 maternal effect embryo arrest 35,
TCP family transcription factor 4		 0.78 0.32 -0.29
30 AT5G17430 Integrase-type DNA-binding superfamily protein BABY BOOM -0.78 0.3 -0.32
31 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.78 0.32 -0.32
32 AT2G39190 Protein kinase superfamily protein ATATH8 0.78 0.31 -0.33
33 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.77 0.31 -0.3
34 AT3G49900 Phototropic-responsive NPH3 family protein 0.77 0.32 -0.31
35 AT1G05230 homeodomain GLABROUS 2 homeodomain GLABROUS 2 0.77 0.31 -0.3
36 AT3G47450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATNOA1, ATNOS1, NO ASSOCIATED 1,
NITRIC OXIDE SYNTHASE 1, RESISTANT
TO INHIBITION WITH FOSMIDOMYCIN 1		 0.77 0.33 -0.32
37 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.77 0.33 -0.31
38 AT5G02420 unknown protein; Has 90 Blast hits to 90 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.76 0.34 -0.3
39 AT5G05640 nucleoprotein-related -0.76 0.33 -0.31
40 AT1G33930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.33 -0.31
41 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.76 0.31 -0.32
42 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 -0.76 0.32 -0.33
43 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.33 -0.3
44 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.76 0.31 -0.32
45 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 -0.76 0.34 -0.32
46 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.76 0.31 -0.32
47 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.76 0.32 -0.3
48 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 -0.76 0.34 -0.3
49 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.33 -0.32
50 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose 5-phosphate
reductoisomerase,
PIGMENT-DEFECTIVE EMBRYO 129		 0.75 0.3 -0.33
51 AT4G28410 Tyrosine transaminase family protein -0.75 0.31 -0.35
52 AT4G34600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane
system; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: M germinated pollen stage, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.75 0.32 -0.3
53 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.75 0.3 -0.33
54 AT5G22830 magnesium (Mg) transporter 10 magnesium (Mg) transporter 10,
GMN10, magnesium (Mg) transporter
10, MAGNESIUM TRANSPORTER 10,
MRS2-11		 0.75 0.33 -0.32
55 AT3G08770 lipid transfer protein 6 lipid transfer protein 6 0.75 0.33 -0.31
56 AT2G45190 Plant-specific transcription factor YABBY family protein ABNORMAL FLORAL ORGANS,
FILAMENTOUS FLOWER, YABBY1		 0.75 0.33 -0.31
57 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.74 0.3 -0.31
58 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 -0.74 0.29 -0.28
59 AT4G08780 Peroxidase superfamily protein -0.74 0.31 -0.32
60 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.74 0.32 -0.31
61 AT2G38370 Plant protein of unknown function (DUF827) -0.73 0.3 -0.31
62 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.73 0.34 -0.32
63 AT1G34110 Leucine-rich receptor-like protein kinase family protein -0.73 0.32 -0.31
64 AT5G66700 homeobox 53 ARABIDOPSIS THALIANA HOMEOBOX 53,
HOMEOBOX-8, homeobox 53		 -0.72 0.31 -0.3
65 AT1G26680 transcriptional factor B3 family protein -0.72 0.32 -0.3
66 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.72 0.31 -0.3
67 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 -0.72 0.33 -0.31
68 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.72 0.31 -0.32
69 AT5G44380 FAD-binding Berberine family protein -0.71 0.31 -0.29
70 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.71 0.3 -0.32
71 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.71 0.33 -0.33
72 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19		 -0.71 0.29 -0.32
73 AT1G11580 methylesterase PCR A ATPMEPCRA, methylesterase PCR A -0.71 0.29 -0.29
74 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 -0.71 0.33 -0.32
75 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.7 0.3 -0.3
76 AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 33, SOMBRERO		 -0.7 0.33 -0.31
77 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.32 -0.31
78 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.69 0.3 -0.31
79 AT5G20830 sucrose synthase 1 ASUS1, atsus1, sucrose synthase 1 -0.69 0.33 -0.3
80 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.69 0.29 -0.33
81 AT1G30760 FAD-binding Berberine family protein -0.69 0.29 -0.32
82 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.33 -0.31
83 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.69 0.29 -0.32
84 AT5G48650 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.69 0.31 -0.31
85 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.31
86 AT5G01830 ARM repeat superfamily protein -0.69 0.33 -0.32
87 AT2G43610 Chitinase family protein -0.69 0.33 -0.31
88 AT3G21770 Peroxidase superfamily protein -0.68 0.31 -0.3
89 AT1G01640 BTB/POZ domain-containing protein -0.68 0.31 -0.31
90 AT4G19460 UDP-Glycosyltransferase superfamily protein -0.68 0.33 -0.33
91 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.68 0.33 -0.3
92 AT1G78960 lupeol synthase 2 lupeol synthase 2, lupeol synthase
2		 -0.68 0.32 -0.31
93 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.68 0.31 -0.3
94 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 -0.68 0.31 -0.32
95 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.68 0.33 -0.31
96 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.67 0.29 -0.31
97 AT5G38030 MATE efflux family protein -0.67 0.32 -0.33
98 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.33 -0.33
99 AT5G22890 C2H2 and C2HC zinc fingers superfamily protein -0.67 0.33 -0.3
100 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.67 0.33 -0.3
101 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 -0.67 0.33 -0.31
102 AT5G59530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.34 -0.31
103 AT5G53320 Leucine-rich repeat protein kinase family protein -0.67 0.3 -0.31
104 AT1G74500 activation-tagged BRI1(brassinosteroid-insensitive
1)-suppressor 1		 activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, TARGET OF
MONOPTEROS 7		 -0.67 0.32 -0.3
105 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 -0.66 0.32 -0.32
106 AT1G44970 Peroxidase superfamily protein -0.66 0.32 -0.31
107 AT2G45830 downstream target of AGL15 2 downstream target of AGL15 2 -0.66 0.32 -0.29
108 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.66 0.33 -0.33
109 AT5G48940 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.66 0.32 -0.31
110 AT4G11350 Protein of unknown function (DUF604) -0.66 0.33 -0.35
111 AT1G59740 Major facilitator superfamily protein -0.66 0.3 -0.31
112 AT3G03170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits
to 184 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.3 -0.31
113 AT2G46740 D-arabinono-1,4-lactone oxidase family protein -0.66 0.34 -0.33
114 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.34
115 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.66 0.3 -0.31
116 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.66 0.35 -0.29
117 AT2G01430 homeobox-leucine zipper protein 17 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN
17, homeobox-leucine zipper
protein 17, homeobox-leucine
zipper protein 17		 -0.66 0.33 -0.32
118 AT1G12160 Flavin-binding monooxygenase family protein -0.66 0.29 -0.33
119 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 -0.66 0.3 -0.3
120 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.66 0.31 -0.29
121 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 -0.66 0.31 -0.31
122 AT2G25980 Mannose-binding lectin superfamily protein -0.66 0.31 -0.32
123 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 -0.66 0.32 -0.32
124 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.66 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.85 0.47 -0.42
126 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.85 0.46 -0.43 C0133
127 C0059 Arginine amide - - - 0.76 0.47 -0.45