AT5G53130 : CYCLIC NUCLEOTIDE-GATED CHANNEL 1
Query Information
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AGICode AT5G53130
Description cyclic nucleotide gated channel 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 1 0.33 -0.32
2 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 0.8 0.29 -0.33
3 AT4G34100 RING/U-box superfamily protein 0.73 0.31 -0.32
4 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 -0.72 0.32 -0.3
5 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.72 0.31 -0.3
6 AT4G31460 Ribosomal L28 family -0.71 0.32 -0.31
7 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 -0.7 0.3 -0.31
8 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 -0.7 0.3 -0.32
9 AT1G66090 Disease resistance protein (TIR-NBS class) 0.69 0.32 -0.31
10 AT4G34750 SAUR-like auxin-responsive protein family -0.69 0.3 -0.32
11 AT5G58400 Peroxidase superfamily protein 0.68 0.31 -0.33
12 AT5G10620 methyltransferases 0.68 0.31 -0.33
13 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 0.68 0.34 -0.29
14 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.68 0.33 -0.32
15 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.68 0.32 -0.32
16 AT1G60960 iron regulated transporter 3 IRON REGULATED TRANSPORTER 3, iron
regulated transporter 3		 -0.68 0.33 -0.33
17 AT5G27930 Protein phosphatase 2C family protein 0.68 0.33 -0.31
18 AT4G27050 F-box/RNI-like superfamily protein -0.67 0.31 -0.32
19 AT5G23230 nicotinamidase 2 nicotinamidase 2 0.66 0.33 -0.33
20 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 -0.65 0.3 -0.31
21 AT4G08480 mitogen-activated protein kinase kinase kinase 9 mitogen-activated protein kinase
kinase kinase 9, MAPK/ERK KINASE
KINASE 2		 0.65 0.34 -0.31
22 AT5G42720 Glycosyl hydrolase family 17 protein 0.64 0.31 -0.32
23 AT1G62800 aspartate aminotransferase 4 aspartate aminotransferase 4 -0.64 0.32 -0.3
24 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.64 0.31 -0.32
25 AT3G02130 receptor-like protein kinase 2 clv3 peptide insensitive 1,
receptor-like protein kinase 2,
TOADSTOOL 2		 0.64 0.32 -0.33
26 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 -0.64 0.31 -0.3
27 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.63 0.29 -0.31
28 AT5G08535 D111/G-patch domain-containing protein 0.63 0.3 -0.31
29 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 0.63 0.34 -0.32
30 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.3 -0.33
31 AT5G54650 formin homology5 FORMIN HOMOLOGY 5, formin
homology5		 0.63 0.33 -0.3
32 AT4G11890 Protein kinase superfamily protein 0.63 0.32 -0.3
33 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.63 0.32 -0.33
34 AT5G05430 RNA-binding protein -0.63 0.31 -0.33
35 AT1G51440 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.29
36 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.62 0.29 -0.34
37 AT1G58270 TRAF-like family protein ZW9 0.62 0.3 -0.33
38 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.62 0.31 -0.33
39 AT1G78090 trehalose-6-phosphate phosphatase Arabidopsis thaliana
trehalose-6-phosphate phosphatase
B, trehalose-6-phosphate
phosphatase B		 -0.62 0.32 -0.32
40 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 -0.62 0.32 -0.3
41 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family -0.62 0.31 -0.31
42 AT1G74420 fucosyltransferase 3 ATFUT3, fucosyltransferase 3 0.62 0.31 -0.32
43 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.62 0.31 -0.3
44 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.62 0.32 -0.33
45 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.62 0.31 -0.31
46 AT1G78070 Transducin/WD40 repeat-like superfamily protein 0.62 0.33 -0.32
47 AT1G79970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF581)
(TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.34 -0.31
48 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 -0.61 0.34 -0.32
49 AT5G39850 Ribosomal protein S4 -0.61 0.31 -0.32
50 AT5G38790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.32 -0.32
51 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.61 0.31 -0.3
52 AT1G66540 Cytochrome P450 superfamily protein 0.61 0.34 -0.33
53 AT5G03200 RING/U-box superfamily protein 0.61 0.32 -0.32
54 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.6 0.32 -0.31
55 AT2G28200 C2H2-type zinc finger family protein -0.6 0.34 -0.32
56 AT5G01810 CBL-interacting protein kinase 15 PROTEIN KINASE 10, CBL-interacting
protein kinase 15, PKS3,
SOS3-INTERACTING PROTEIN 2,
SNF1-RELATED PROTEIN KINASE 3.1		 0.6 0.32 -0.29
57 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.6 0.34 -0.32
58 AT1G64300 Protein kinase family protein 0.6 0.33 -0.32
59 AT5G37830 oxoprolinase 1 oxoprolinase 1 0.59 0.33 -0.32
60 AT4G13630 Protein of unknown function, DUF593 0.59 0.3 -0.31
61 ATMG01370 hypothetical protein ORF111D -0.59 0.31 -0.34
62 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family -0.59 0.28 -0.33
63 AT2G16230 O-Glycosyl hydrolases family 17 protein -0.59 0.35 -0.31
64 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.3 -0.31
65 AT4G34640 squalene synthase 1 ERG9, squalene synthase 1 -0.59 0.32 -0.3
66 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 -0.59 0.31 -0.31
67 AT5G26830 Threonyl-tRNA synthetase -0.58 0.33 -0.29
68 AT2G01330 nucleotide binding 0.58 0.3 -0.32
69 AT1G74090 desulfo-glucosinolate sulfotransferase 18 DESULFO-GLUCOSINOLATE
SULFOTRANSFERASE 18, ARABIDOPSIS
SULFOTRANSFERASE 5B,
desulfo-glucosinolate
sulfotransferase 18		 -0.58 0.31 -0.34
70 AT1G68120 basic pentacysteine 3 ATBPC3, basic pentacysteine 3 -0.58 0.33 -0.31
71 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.58 0.3 -0.32
72 AT3G25855 Copper transport protein family 0.58 0.33 -0.29
73 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 -0.58 0.32 -0.32
74 AT5G20350 Ankyrin repeat family protein with DHHC zinc finger domain TIP GROWTH DEFECTIVE 1 0.58 0.3 -0.31
75 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.31 -0.34
76 AT1G67470 Protein kinase superfamily protein 0.57 0.31 -0.33
77 AT2G22350 transposable element gene 0.57 0.32 -0.32
78 AT3G10680 HSP20-like chaperones superfamily protein 0.57 0.32 -0.33
79 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.57 0.29 -0.32
80 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 0.57 0.31 -0.33
81 AT2G31810 ACT domain-containing small subunit of acetolactate
synthase protein		 -0.56 0.32 -0.31
82 AT5G08500 Transmembrane CLPTM1 family protein -0.56 0.29 -0.31
83 AT2G23290 myb domain protein 70 myb domain protein 70, myb domain
protein 70		 -0.56 0.31 -0.32
84 AT3G27580 Protein kinase superfamily protein ATPK7, D6 PROTEIN KINASE LIKE 3 -0.56 0.35 -0.34
85 AT4G10560 Cysteine/Histidine-rich C1 domain family protein maternal effect embryo arrest 53 -0.55 0.31 -0.31
86 AT5G18340 ARM repeat superfamily protein -0.54 0.33 -0.32
87 AT1G74000 strictosidine synthase 3 strictosidine synthase 3 -0.53 0.31 -0.32
88 AT1G13140 cytochrome P450, family 86, subfamily C, polypeptide 3 cytochrome P450, family 86,
subfamily C, polypeptide 3		 -0.53 0.32 -0.32
89 AT5G01740 Nuclear transport factor 2 (NTF2) family protein -0.53 0.33 -0.34
90 AT3G11220 Paxneb protein-related ELONGATA 1 -0.52 0.28 -0.31
91 AT4G22280 F-box/RNI-like superfamily protein -0.52 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0183 MST_3033.1 - - - 0.92 0.41 -0.48
93 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.89 0.45 -0.46 C0038
94 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.85 0.46 -0.48 C0033
95 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		0.66 0.32 -0.3 C0092
96 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.65 0.3 -0.31 C0037