AT5G53290 : cytokinin response factor 3
Query Information
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AGICode AT5G53290
Description cytokinin response factor 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 1 0.31 -0.33
2 AT2G42350 RING/U-box superfamily protein 0.8 0.32 -0.33
3 AT5G22890 C2H2 and C2HC zinc fingers superfamily protein 0.76 0.32 -0.3
4 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.74 0.31 -0.3
5 AT5G14460 Pseudouridine synthase family protein -0.73 0.31 -0.33
6 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 0.73 0.31 -0.32
7 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.72 0.32 -0.31
8 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.71 0.31 -0.33
9 AT4G13130 Cysteine/Histidine-rich C1 domain family protein 0.7 0.32 -0.33
10 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 -0.7 0.33 -0.34
11 AT4G14770 TESMIN/TSO1-like CXC 2 TESMIN/TSO1-LIKE CXC 2,
TESMIN/TSO1-like CXC 2		 -0.7 0.32 -0.32
12 AT4G35920 PLAC8 family protein mid1-complementing activity 1 -0.69 0.34 -0.3
13 AT5G46690 beta HLH protein 71 beta HLH protein 71 -0.69 0.31 -0.31
14 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.31 -0.32
15 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 0.69 0.31 -0.31
16 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 -0.69 0.32 -0.33
17 AT1G03160 FZO-like FZO-like -0.68 0.35 -0.3
18 AT2G45590 Protein kinase superfamily protein -0.68 0.32 -0.33
19 AT5G18940 Mo25 family protein -0.68 0.32 -0.29
20 AT1G50310 sugar transporter 9 SUGAR TRANSPORTER 9, sugar
transporter 9		 -0.68 0.29 -0.32
21 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 0.67 0.34 -0.29
22 AT2G44650 chloroplast chaperonin 10 chloroplast chaperonin 10,
CHLOROPLAST CHAPERONIN 10		 -0.67 0.3 -0.33
23 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.67 0.32 -0.34
24 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.67 0.32 -0.3
25 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.67 0.31 -0.33
26 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.66 0.3 -0.31
27 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.66 0.33 -0.33
28 AT3G46690 UDP-Glycosyltransferase superfamily protein 0.66 0.32 -0.3
29 AT5G24000 Protein of unknown function (DUF819) -0.66 0.31 -0.3
30 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 -0.66 0.3 -0.33
31 AT5G66090 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.66 0.31 -0.32
32 AT2G48120 pale cress protein (PAC) PALE CRESS -0.66 0.33 -0.31
33 AT3G11560 LETM1-like protein -0.65 0.3 -0.34
34 AT4G33500 Protein phosphatase 2C family protein -0.65 0.32 -0.35
35 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 -0.65 0.32 -0.31
36 AT4G18820 AAA-type ATPase family protein -0.65 0.32 -0.3
37 AT3G03680 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.65 0.33 -0.33
38 AT1G22540 Major facilitator superfamily protein -0.65 0.3 -0.3
39 AT2G45810 DEA(D/H)-box RNA helicase family protein -0.65 0.29 -0.32
40 AT1G04140 Transducin family protein / WD-40 repeat family protein -0.65 0.3 -0.3
41 AT5G46420 16S rRNA processing protein RimM family -0.65 0.31 -0.32
42 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 -0.64 0.33 -0.35
43 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.64 0.34 -0.32
44 AT1G02020 nitroreductase family protein -0.64 0.31 -0.31
45 AT1G32160 Protein of unknown function (DUF760) -0.64 0.32 -0.31
46 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 -0.64 0.31 -0.32
47 AT1G24020 MLP-like protein 423 MLP-like protein 423 -0.64 0.33 -0.32
48 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.64 0.32 -0.31
49 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
50 AT3G47390 cytidine/deoxycytidylate deaminase family protein PHOTOSENSITIVE 1 -0.64 0.31 -0.31
51 AT5G58950 Protein kinase superfamily protein -0.63 0.3 -0.33
52 AT2G21850 Cysteine/Histidine-rich C1 domain family protein 0.63 0.32 -0.33
53 AT1G05230 homeodomain GLABROUS 2 homeodomain GLABROUS 2 -0.63 0.3 -0.31
54 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 0.63 0.31 -0.3
55 AT5G22790 reticulata-related 1 reticulata-related 1 0.63 0.31 -0.32
56 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 -0.63 0.34 -0.31
57 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.62 0.31 -0.32
58 AT4G07920 transposable element gene 0.62 0.34 -0.32
59 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 0.62 0.3 -0.32
60 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 0.62 0.31 -0.32
61 AT4G25980 Peroxidase superfamily protein -0.62 0.35 -0.32
62 AT1G31540 Disease resistance protein (TIR-NBS-LRR class) family 0.62 0.34 -0.32
63 AT5G12150 Rho GTPase activation protein (RhoGAP) with PH domain -0.62 0.3 -0.34
64 AT5G03910 ABC2 homolog 12 ATP-binding cassette B29,
ARABIDOPSIS THALIANA ABC
TRANSPORTER HOMOLOG 12, ABC2
homolog 12		 -0.62 0.33 -0.31
65 AT5G65685 UDP-Glycosyltransferase superfamily protein -0.61 0.29 -0.31
66 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 -0.61 0.31 -0.33
67 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 -0.61 0.3 -0.3
68 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.29 -0.33
69 AT1G74620 RING/U-box superfamily protein -0.6 0.3 -0.33
70 AT1G31030 transposable element gene -0.6 0.33 -0.3
71 AT1G05280 Protein of unknown function (DUF604) 0.6 0.31 -0.3
72 AT3G05350 Metallopeptidase M24 family protein -0.6 0.33 -0.33
73 AT2G39690 Protein of unknown function, DUF547 -0.6 0.3 -0.3
74 AT4G28760 Protein of unknown function (DUF3741) -0.6 0.31 -0.33
75 AT3G04200 RmlC-like cupins superfamily protein -0.6 0.32 -0.31
76 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 -0.6 0.31 -0.31
77 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.31
78 AT3G19460 Reticulon family protein -0.6 0.32 -0.31
79 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.6 0.31 -0.31
80 AT3G20670 histone H2A 13 histone H2A 13 -0.6 0.28 -0.33
81 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.31 -0.29
82 AT2G45220 Plant invertase/pectin methylesterase inhibitor superfamily 0.59 0.33 -0.32
83 AT2G37430 C2H2 and C2HC zinc fingers superfamily protein 0.59 0.3 -0.34
84 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.59 0.31 -0.31
85 AT1G15170 MATE efflux family protein 0.59 0.31 -0.32
86 AT3G20710 F-box family protein 0.59 0.29 -0.32
87 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c		 0.58 0.31 -0.32
88 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.32 -0.33
89 AT1G30700 FAD-binding Berberine family protein 0.58 0.33 -0.31
90 AT4G32680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.29 -0.31
91 AT2G01430 homeobox-leucine zipper protein 17 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN
17, homeobox-leucine zipper
protein 17, homeobox-leucine
zipper protein 17		 0.58 0.33 -0.32
92 AT4G15120 VQ motif-containing protein 0.58 0.31 -0.3
93 AT3G03660 WUSCHEL related homeobox 11 WUSCHEL related homeobox 11 0.57 0.32 -0.32
94 AT5G49400 zinc knuckle (CCHC-type) family protein 0.57 0.29 -0.32
95 AT1G77640 Integrase-type DNA-binding superfamily protein 0.56 0.32 -0.31
96 AT2G16595 Translocon-associated protein (TRAP), alpha subunit 0.56 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0159 MST_1505.6 - - - -0.71 0.46 -0.42
98 C0162 MST_1588.3 - - - -0.68 0.47 -0.43
99 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.66 0.44 -0.42 C0234