AT5G53370 : PECTIN METHYLESTERASE PCR FRAGMENT F
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G53370
Description pectin methylesterase PCR fragment F
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 1 0.32 -0.31
2 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.3 -0.31
3 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 0.76 0.35 -0.34
4 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 0.75 0.32 -0.31
5 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 0.73 0.31 -0.31
6 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 0.71 0.31 -0.31
7 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 0.69 0.31 -0.31
8 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 -0.69 0.33 -0.33
9 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 0.68 0.33 -0.3
10 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 0.67 0.3 -0.32
11 AT2G27920 serine carboxypeptidase-like 51 serine carboxypeptidase-like 51 0.67 0.3 -0.31
12 AT1G10340 Ankyrin repeat family protein 0.67 0.3 -0.3
13 AT4G23060 IQ-domain 22 IQ-domain 22 -0.66 0.33 -0.32
14 AT3G02910 AIG2-like (avirulence induced gene) family protein 0.66 0.33 -0.3
15 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.65 0.3 -0.32
16 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 -0.65 0.33 -0.31
17 AT1G69720 heme oxygenase 3 heme oxygenase 3 0.65 0.3 -0.32
18 AT1G52800 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.35 -0.32
19 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3		 0.65 0.31 -0.33
20 AT4G19420 Pectinacetylesterase family protein 0.65 0.32 -0.3
21 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 0.65 0.33 -0.31
22 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 0.65 0.3 -0.31
23 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 0.64 0.34 -0.3
24 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 0.64 0.33 -0.31
25 AT3G47480 Calcium-binding EF-hand family protein 0.64 0.32 -0.32
26 AT1G75760 ER lumen protein retaining receptor family protein 0.63 0.34 -0.31
27 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 0.63 0.3 -0.33
28 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.63 0.32 -0.34
29 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 -0.63 0.32 -0.33
30 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.63 0.31 -0.3
31 AT5G61430 NAC domain containing protein 100 NAC domain containing protein 100,
ATNAC5, NAC domain containing
protein 100		 0.63 0.33 -0.34
32 AT2G25510 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.29 -0.33
33 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.63 0.3 -0.31
34 AT1G73680 alpha dioxygenase alpha dioxygenase 0.63 0.31 -0.32
35 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.32
36 AT1G08650 phosphoenolpyruvate carboxylase kinase 1 PHOSPHOENOLPYRUVATE CARBOXYLASE
KINASE 1, phosphoenolpyruvate
carboxylase kinase 1		 0.62 0.31 -0.3
37 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein 0.62 0.32 -0.3
38 AT4G26200 1-amino-cyclopropane-1-carboxylate synthase 7 1-amino-cyclopropane-1-carboxylate
synthase 7, ATACS7		 0.62 0.32 -0.32
39 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.3
40 AT1G11700 Protein of unknown function, DUF584 0.62 0.29 -0.3
41 AT3G48740 Nodulin MtN3 family protein AtSWEET11, SWEET11 0.62 0.32 -0.31
42 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 -0.61 0.32 -0.3
43 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 0.61 0.31 -0.3
44 AT2G01890 purple acid phosphatase 8 PURPLE ACID PHOSPHATASE 8, purple
acid phosphatase 8		 -0.61 0.3 -0.31
45 AT1G13750 Purple acid phosphatases superfamily protein 0.61 0.32 -0.29
46 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 0.61 0.33 -0.33
47 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.61 0.31 -0.33
48 AT5G59720 heat shock protein 18.2 heat shock protein 18.2 0.6 0.32 -0.31
49 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.6 0.32 -0.32
50 AT5G55700 beta-amylase 4 beta-amylase 4, BETA-AMYLASE 6 -0.6 0.33 -0.32
51 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.6 0.31 -0.3
52 AT5G26940 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 defective in pollen organelle DNA
degradation1		 -0.6 0.31 -0.32
53 AT3G07640 unknown protein; Has 27 Blast hits to 27 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.33 -0.33
54 AT2G25470 receptor like protein 21 receptor like protein 21, receptor
like protein 21		 0.59 0.3 -0.31
55 AT1G75750 GAST1 protein homolog 1 GAST1 protein homolog 1 0.59 0.32 -0.32
56 AT5G10620 methyltransferases -0.59 0.33 -0.3
57 AT1G34180 NAC domain containing protein 16 NAC domain containing protein 16,
NAC domain containing protein 16		 0.59 0.32 -0.34
58 AT1G01630 Sec14p-like phosphatidylinositol transfer family protein 0.59 0.33 -0.32
59 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 0.59 0.33 -0.32
60 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 0.59 0.31 -0.33
61 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 0.59 0.31 -0.3
62 AT5G18840 Major facilitator superfamily protein 0.59 0.32 -0.31
63 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 -0.58 0.3 -0.31
64 AT5G59780 myb domain protein 59 MYB DOMAIN PROTEIN 59, ATMYB59-1,
ATMYB59-2, ATMYB59-3, myb domain
protein 59		 0.58 0.29 -0.32
65 AT4G25170 Uncharacterised conserved protein (UCP012943) -0.58 0.34 -0.32
66 AT5G16290 VALINE-TOLERANT 1 VALINE-TOLERANT 1 -0.58 0.31 -0.34
67 AT3G50570 hydroxyproline-rich glycoprotein family protein 0.58 0.32 -0.33
68 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 0.58 0.33 -0.3
69 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 0.58 0.31 -0.34
70 AT1G01070 nodulin MtN21 /EamA-like transporter family protein 0.58 0.31 -0.32
71 AT1G53310 phosphoenolpyruvate carboxylase 1 ATPEPC1, phosphoenolpyruvate
carboxylase 1,
PEP(PHOSPHOENOLPYRUVATE)
CARBOXYLASE 1, phosphoenolpyruvate
carboxylase 1		 0.58 0.31 -0.31
72 AT5G60250 zinc finger (C3HC4-type RING finger) family protein 0.58 0.31 -0.31
73 AT2G28890 poltergeist like 4 poltergeist like 4 0.58 0.3 -0.31
74 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.57 0.29 -0.34
75 AT4G31330 Protein of unknown function, DUF599 0.57 0.3 -0.31
76 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 0.57 0.3 -0.32
77 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.57 0.32 -0.3
78 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 -0.57 0.33 -0.32
79 AT1G50380 Prolyl oligopeptidase family protein -0.57 0.32 -0.31
80 AT5G47130 Bax inhibitor-1 family protein 0.57 0.32 -0.32
81 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 0.57 0.33 -0.32
82 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 -0.57 0.31 -0.31
83 AT1G33680 KH domain-containing protein -0.56 0.32 -0.33
84 AT1G55120 beta-fructofuranosidase 5 6-fructan exohydrolase,
beta-fructofuranosidase 5,
beta-fructofuranosidase 5		 0.56 0.33 -0.3
85 AT1G16510 SAUR-like auxin-responsive protein family 0.56 0.31 -0.32
86 AT2G43190 ribonuclease P family protein -0.56 0.31 -0.33
87 AT3G17790 purple acid phosphatase 17 ATACP5, ATPAP17, purple acid
phosphatase 17		 0.56 0.3 -0.31
88 AT5G36290 Uncharacterized protein family (UPF0016) -0.56 0.29 -0.32
89 AT4G00240 phospholipase D beta 2 phospholipase D beta 2 0.55 0.31 -0.32
90 AT1G70610 transporter associated with antigen processing protein 1 ATP-binding cassette B26,
transporter associated with
antigen processing protein 1,
transporter associated with
antigen processing protein 1		 -0.55 0.3 -0.32
91 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.55 0.35 -0.32
92 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein -0.55 0.31 -0.32
93 AT5G27360 Major facilitator superfamily protein SFP2 0.55 0.33 -0.31
94 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.55 0.32 -0.32
95 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 -0.54 0.31 -0.31
96 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 -0.54 0.3 -0.31
97 AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.53 0.3 -0.3
98 AT1G63980 D111/G-patch domain-containing protein -0.53 0.31 -0.32
99 AT5G25475 AP2/B3-like transcriptional factor family protein -0.53 0.3 -0.29
100 AT1G10180 BEST Arabidopsis thaliana protein match is: exocyst complex
component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132
proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa -
7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink).		 -0.53 0.3 -0.3
101 AT1G58340 MATE efflux family protein BUSH-AND-CHLOROTIC-DWARF 1, ZF14,
ZRIZI		 -0.53 0.31 -0.32
102 AT1G70060 SIN3-like 4 SIN3-like 4 -0.53 0.31 -0.32
103 AT1G59750 auxin response factor 1 auxin response factor 1 -0.52 0.32 -0.31
104 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 -0.52 0.31 -0.32
105 AT5G15920 structural maintenance of chromosomes 5 EMBRYO DEFECTIVE 2782, structural
maintenance of chromosomes 5		 -0.52 0.32 -0.31
106 AT5G49400 zinc knuckle (CCHC-type) family protein -0.52 0.32 -0.31
107 AT2G18700 trehalose phosphatase/synthase 11 trehalose phosphatase/synthase 11,
ATTPSB, trehalose
phosphatase/synthase 11,
TREHALOSE-6-PHOSPHATE SYNTHASE 11		 -0.52 0.32 -0.3
108 AT3G06010 Homeotic gene regulator ATCHR12 -0.51 0.29 -0.32
109 AT2G18630 Protein of unknown function (DUF677) -0.51 0.33 -0.31
110 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.51 0.31 -0.3
111 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2		 -0.51 0.31 -0.31
112 AT1G03330 Small nuclear ribonucleoprotein family protein -0.51 0.32 -0.31
113 AT1G76510 ARID/BRIGHT DNA-binding domain-containing protein -0.51 0.31 -0.3
114 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.5 0.32 -0.32
115 AT3G06130 Heavy metal transport/detoxification superfamily protein -0.5 0.33 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0229 Robinin - - flavone biosynthesis -0.66 0.45 -0.45
117 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		-0.65 0.4 -0.45 C0233
118 C0089 Fortunellin - - - -0.65 0.45 -0.44
119 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis -0.61 0.47 -0.45 C0002
120 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.54 0.44 -0.44