AT5G52980 : -
Query Information
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AGICode AT5G52980
Description CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52980 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly
factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 1 0.34 -0.29
2 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.73 0.3 -0.32
3 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.72 0.31 -0.32
4 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 0.72 0.28 -0.3
5 AT1G78240 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OSU1, QUASIMODO2, TUMOROUS SHOOT
DEVELOPMENT 2		 0.72 0.31 -0.31
6 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.72 0.32 -0.33
7 AT5G39900 Small GTP-binding protein 0.7 0.31 -0.34
8 AT2G16430 purple acid phosphatase 10 ATPAP10, purple acid phosphatase
10		 0.7 0.33 -0.34
9 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.3
10 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 0.7 0.31 -0.31
11 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.7 0.34 -0.34
12 AT5G58660 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.33 -0.31
13 AT1G03260 SNARE associated Golgi protein family 0.7 0.31 -0.32
14 AT4G19120 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 early-responsive to dehydration 3 0.7 0.3 -0.32
15 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.32 -0.33
16 AT1G27340 Galactose oxidase/kelch repeat superfamily protein 0.69 0.33 -0.31
17 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily 0.69 0.33 -0.33
18 AT3G14230 related to AP2 2 related to AP2 2 0.69 0.32 -0.3
19 AT4G35040 Basic-leucine zipper (bZIP) transcription factor family
protein		 bZIP19 0.67 0.3 -0.32
20 AT5G66880 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 SUCROSE NONFERMENTING 1
(SNF1)-RELATED PROTEIN KINASE 2-3,
sucrose nonfermenting
1(SNF1)-related protein kinase
2.3, SRK2I		 -0.67 0.31 -0.32
21 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 0.67 0.31 -0.29
22 AT1G27930 Protein of unknown function (DUF579) 0.67 0.32 -0.31
23 AT5G20180 Ribosomal protein L36 0.67 0.31 -0.32
24 AT1G15470 Transducin/WD40 repeat-like superfamily protein 0.67 0.31 -0.34
25 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.66 0.28 -0.32
26 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.66 0.31 -0.32
27 AT2G04740 ankyrin repeat family protein 0.66 0.3 -0.32
28 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.66 0.31 -0.3
29 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 0.65 0.33 -0.32
30 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.65 0.31 -0.29
31 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.32
32 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.64 0.31 -0.33
33 AT5G19980 golgi nucleotide sugar transporter 4 golgi nucleotide sugar transporter
4		 0.64 0.33 -0.32
34 AT2G32390 glutamate receptor 3.5 glutamate receptor 3.5, glutamate
receptor 3.5, GLR6		 0.64 0.31 -0.34
35 AT4G26940 Galactosyltransferase family protein 0.64 0.3 -0.34
36 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1		 0.64 0.31 -0.31
37 AT3G51050 FG-GAP repeat-containing protein 0.63 0.32 -0.3
38 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 0.63 0.33 -0.3
39 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 0.63 0.32 -0.35
40 AT5G54760 Translation initiation factor SUI1 family protein 0.63 0.31 -0.31
41 AT5G54830 DOMON domain-containing protein / dopamine
beta-monooxygenase N-terminal domain-containing protein		 0.63 0.33 -0.3
42 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 0.63 0.32 -0.29
43 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.62 0.31 -0.31
44 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.62 0.31 -0.31
45 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.33 -0.31
46 AT4G25240 SKU5 similar 1 SKU5 similar 1 -0.61 0.31 -0.31
47 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.6 0.31 -0.32
48 AT5G66080 Protein phosphatase 2C family protein -0.59 0.31 -0.33
49 AT2G28305 Putative lysine decarboxylase family protein ATLOG1, LONELY GUY 1 -0.59 0.32 -0.33
50 AT5G57670 Protein kinase superfamily protein -0.58 0.32 -0.32
51 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.58 0.32 -0.3
52 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-15, ATHB15, CORONA, INCURVATA
4		 -0.57 0.3 -0.32
53 AT5G64310 arabinogalactan protein 1 arabinogalactan protein 1, ATAGP1 -0.57 0.32 -0.3
54 AT1G79620 Leucine-rich repeat protein kinase family protein -0.56 0.32 -0.31
55 AT2G16005 MD-2-related lipid recognition domain-containing protein -0.56 0.32 -0.3
56 AT4G26140 beta-galactosidase 12 beta-galactosidase 12 -0.56 0.32 -0.3
57 AT5G19330 ARM repeat protein interacting with ABF2 ARM repeat protein interacting
with ABF2		 -0.56 0.33 -0.31
58 AT1G73950 Transmembrane Fragile-X-F-associated protein -0.56 0.33 -0.32
59 AT2G39570 ACT domain-containing protein ACT domain repeats 9 -0.56 0.32 -0.31
60 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.55 0.29 -0.33
61 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 -0.54 0.3 -0.32
62 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.54 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
63 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.63 0.29 -0.29 C0235