AT5G52880 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G52880
Description F-box family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52880 F-box family protein 1 0.31 -0.32
2 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 -0.74 0.31 -0.32
3 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.3 -0.28
4 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 0.72 0.31 -0.3
5 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.32 -0.3
6 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.32 -0.34
7 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 -0.71 0.33 -0.3
8 AT1G14300 ARM repeat superfamily protein -0.7 0.32 -0.31
9 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.69 0.3 -0.32
10 AT5G23300 pyrimidine d pyrimidine d -0.69 0.32 -0.33
11 AT3G13040 myb-like HTH transcriptional regulator family protein 0.69 0.32 -0.3
12 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 -0.68 0.33 -0.34
13 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 -0.68 0.31 -0.33
14 AT4G29070 Phospholipase A2 family protein 0.68 0.32 -0.31
15 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic -0.68 0.31 -0.31
16 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 0.68 0.31 -0.32
17 AT3G10090 Nucleic acid-binding, OB-fold-like protein -0.68 0.31 -0.32
18 AT3G18510 unknown protein; Has 15 Blast hits to 15 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.3
19 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.68 0.31 -0.33
20 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 0.67 0.31 -0.32
21 AT5G53770 Nucleotidyltransferase family protein -0.67 0.33 -0.34
22 AT3G55605 Mitochondrial glycoprotein family protein -0.67 0.32 -0.33
23 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A -0.67 0.31 -0.34
24 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 -0.67 0.35 -0.33
25 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.67 0.32 -0.31
26 AT1G61640 Protein kinase superfamily protein -0.67 0.32 -0.31
27 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.66 0.31 -0.31
28 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 -0.66 0.31 -0.34
29 AT3G58300 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.66 0.29 -0.33
30 AT5G40590 Cysteine/Histidine-rich C1 domain family protein -0.66 0.3 -0.32
31 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.3 -0.31
32 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.66 0.31 -0.33
33 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 -0.66 0.31 -0.3
34 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A -0.66 0.32 -0.33
35 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.66 0.31 -0.33
36 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 -0.65 0.32 -0.34
37 AT5G45620 Proteasome component (PCI) domain protein -0.65 0.33 -0.32
38 AT2G47640 Small nuclear ribonucleoprotein family protein -0.65 0.33 -0.31
39 AT5G04310 Pectin lyase-like superfamily protein -0.65 0.31 -0.32
40 AT3G56050 Protein kinase family protein 0.65 0.32 -0.32
41 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 -0.65 0.32 -0.3
42 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 -0.65 0.32 -0.32
43 AT1G53645 hydroxyproline-rich glycoprotein family protein -0.65 0.31 -0.29
44 AT4G00090 Transducin/WD40 repeat-like superfamily protein -0.65 0.31 -0.32
45 AT5G22840 Protein kinase superfamily protein -0.65 0.3 -0.31
46 AT2G17360 Ribosomal protein S4 (RPS4A) family protein -0.65 0.34 -0.32
47 AT1G18400 BR enhanced expression 1 BR enhanced expression 1 -0.65 0.3 -0.32
48 AT1G80340 gibberellin 3-oxidase 2 ARABIDOPSIS THALIANA
GIBBERELLIN-3-OXIDASE 2,
gibberellin 3-oxidase 2, GA4H		 -0.64 0.3 -0.33
49 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 -0.64 0.31 -0.31
50 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics -0.64 0.3 -0.32
51 AT1G59940 response regulator 3 response regulator 3 -0.64 0.31 -0.31
52 AT4G15570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MAGATAMA 3 -0.64 0.32 -0.32
53 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 -0.64 0.32 -0.35
54 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.33 -0.34
55 AT5G62130 Per1-like family protein 0.63 0.32 -0.33
56 AT1G76270 O-fucosyltransferase family protein -0.63 0.33 -0.29
57 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.63 0.33 -0.33
58 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.63 0.3 -0.3
59 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.63 0.34 -0.3
60 AT5G18280 apyrase 2 apyrase 2, apyrase 2 -0.63 0.31 -0.32
61 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 -0.63 0.32 -0.29
62 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 0.63 0.3 -0.33
63 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.62 0.32 -0.31
64 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.62 0.33 -0.31
65 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.62 0.31 -0.3
66 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.62 0.32 -0.31
67 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.62 0.33 -0.3
68 AT5G21130 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.31 -0.32
69 AT5G05790 Duplicated homeodomain-like superfamily protein -0.62 0.32 -0.31
70 AT1G14210 Ribonuclease T2 family protein -0.62 0.31 -0.3
71 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.62 0.31 -0.31
72 AT1G22730 MA3 domain-containing protein -0.61 0.31 -0.31
73 AT5G10900 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.61 0.3 -0.32
74 AT4G09580 SNARE associated Golgi protein family 0.61 0.32 -0.31
75 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 -0.61 0.32 -0.31
76 AT3G55720 Protein of unknown function (DUF620) -0.61 0.32 -0.32
77 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.31 -0.33
78 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.61 0.28 -0.32
79 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 -0.61 0.31 -0.33
80 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 -0.61 0.32 -0.33
81 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.32 -0.3
82 AT2G45340 Leucine-rich repeat protein kinase family protein 0.61 0.31 -0.32
83 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 0.6 0.31 -0.32
84 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 0.6 0.3 -0.3
85 AT2G17120 lysm domain GPI-anchored protein 2 precursor lysm domain GPI-anchored protein 2
precursor		 0.6 0.31 -0.32
86 AT2G35690 acyl-CoA oxidase 5 acyl-CoA oxidase 5 0.6 0.32 -0.32
87 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 0.59 0.3 -0.31
88 AT4G01280 Homeodomain-like superfamily protein 0.59 0.33 -0.3
89 AT1G33813 transposable element gene 0.59 0.33 -0.33
90 AT5G42910 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.59 0.32 -0.33
91 AT5G51290 Diacylglycerol kinase family protein 0.58 0.32 -0.33
92 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 0.57 0.31 -0.32
93 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.56 0.3 -0.33
94 AT3G16280 Integrase-type DNA-binding superfamily protein 0.56 0.3 -0.33
95 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.31 -0.3
96 AT1G28300 AP2/B3-like transcriptional factor family protein LEAFY COTYLEDON 2 0.56 0.3 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.79 0.44 -0.48 C0031
98 C0121 Isoheptylglucosinolate - - - -0.69 0.46 -0.44
99 C0164 MST_1596.8 - - - -0.66 0.46 -0.46