AT5G53070 : -
Query Information
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AGICode AT5G53070
Description Ribosomal protein L9/RNase H1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53070 Ribosomal protein L9/RNase H1 1 0.31 -0.31
2 AT1G04900 Protein of unknown function (DUF185) 0.73 0.34 -0.32
3 AT1G68150 WRKY DNA-binding protein 9 ATWRKY9, WRKY DNA-binding protein
9		 0.73 0.32 -0.31
4 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.31 -0.3
5 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.73 0.3 -0.31
6 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.72 0.31 -0.31
7 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.72 0.3 -0.3
8 AT5G58740 HSP20-like chaperones superfamily protein -0.72 0.3 -0.32
9 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.71 0.32 -0.3
10 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.71 0.33 -0.32
11 AT4G38010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7 0.3 -0.3
12 AT5G25160 zinc finger protein 3 zinc finger protein 3 0.7 0.31 -0.33
13 AT1G42365 transposable element gene 0.7 0.31 -0.31
14 AT1G62280 SLAC1 homologue 1 SLAC1 homologue 1 0.7 0.32 -0.31
15 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 0.69 0.33 -0.32
16 AT1G59760 RNA helicase, ATP-dependent, SK12/DOB1 protein AtMTR4, homolog of yeast MTR4 0.69 0.29 -0.32
17 AT5G02350 Cysteine/Histidine-rich C1 domain family protein 0.69 0.33 -0.32
18 AT1G53660 nodulin MtN21 /EamA-like transporter family protein 0.69 0.32 -0.29
19 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.29 -0.34
20 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.29
21 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.68 0.31 -0.29
22 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.68 0.3 -0.31
23 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.68 0.31 -0.31
24 AT5G01930 Glycosyl hydrolase superfamily protein AtMAN6, endo-beta-mannase 6 -0.68 0.32 -0.32
25 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.68 0.32 -0.32
26 AT5G02310 proteolysis 6 proteolysis 6 -0.68 0.32 -0.32
27 AT1G32450 nitrate transporter 1.5 nitrate transporter 1.5 0.68 0.32 -0.32
28 AT3G53350 ROP interactive partner 4 ROP interactive partner 4 -0.66 0.28 -0.34
29 AT5G08090 unknown protein; Has 13 Blast hits to 13 proteins in 8
species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.31 -0.32
30 AT5G53520 oligopeptide transporter 8 oligopeptide transporter 8,
oligopeptide transporter 8		 0.66 0.3 -0.32
31 AT2G40600 appr-1-p processing enzyme family protein -0.66 0.29 -0.3
32 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.66 0.34 -0.3
33 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 0.66 0.34 -0.32
34 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 -0.66 0.31 -0.31
35 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 -0.66 0.31 -0.33
36 AT4G01140 Protein of unknown function (DUF1191) 0.66 0.29 -0.31
37 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.66 0.32 -0.3
38 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.33 -0.31
39 AT5G22680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has
65 Blast hits to 64 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.33
40 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.65 0.3 -0.32
41 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.65 0.33 -0.31
42 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.65 0.3 -0.33
43 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.31 -0.32
44 AT2G21480 Malectin/receptor-like protein kinase family protein 0.65 0.3 -0.33
45 AT2G45080 cyclin p3;1 cyclin p3;1 0.64 0.32 -0.32
46 AT1G56380 Mitochondrial transcription termination factor family
protein		 0.64 0.33 -0.31
47 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.64 0.31 -0.32
48 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 -0.64 0.31 -0.32
49 AT4G27980 Domain of unknown function (DUF3444) 0.64 0.29 -0.35
50 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 -0.64 0.33 -0.31
51 AT3G51250 Senescence/dehydration-associated protein-related -0.63 0.32 -0.33
52 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.31 -0.3
53 AT3G07860 Ubiquitin-like superfamily protein 0.63 0.32 -0.29
54 AT1G64185 Lactoylglutathione lyase / glyoxalase I family protein 0.63 0.31 -0.29
55 AT1G35550 elongation factor Tu C-terminal domain-containing protein 0.63 0.29 -0.33
56 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 0.63 0.31 -0.3
57 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.63 0.34 -0.32
58 AT4G22740 glycine-rich protein -0.63 0.31 -0.34
59 AT1G48620 high mobility group A5 high mobility group A5 -0.63 0.33 -0.32
60 AT1G19090 receptor-like serine/threonine kinase 2 CYSTEINE-RICH RLK (RECEPTOR-LIKE
PROTEIN KINASE) 1, receptor-like
serine/threonine kinase 2		 0.63 0.31 -0.3
61 AT3G22940 F-box associated ubiquitination effector family protein -0.63 0.32 -0.32
62 AT5G10770 Eukaryotic aspartyl protease family protein -0.62 0.31 -0.32
63 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.3
64 AT5G45880 Pollen Ole e 1 allergen and extensin family protein 0.62 0.33 -0.32
65 AT3G42100 transposable element gene 0.62 0.31 -0.3
66 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.31 -0.32
67 AT4G29560 CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E
protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits
to 41 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.62 0.31 -0.31
68 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.34
69 AT4G19350 embryo defective 3006 embryo defective 3006 0.62 0.32 -0.29
70 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.61 0.32 -0.28
71 AT2G04820 transposable element gene 0.61 0.29 -0.31
72 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 -0.61 0.31 -0.34
73 AT5G11570 Major facilitator superfamily protein 0.61 0.31 -0.31
74 AT4G05170 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.61 0.31 -0.3
75 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.61 0.28 -0.32
76 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 0.61 0.32 -0.3
77 AT2G35390 Phosphoribosyltransferase family protein 0.61 0.3 -0.31
78 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.6 0.31 -0.31
79 AT3G12480 nuclear factor Y, subunit C11 nuclear factor Y, subunit C11 -0.6 0.32 -0.31
80 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 -0.6 0.32 -0.3
81 AT2G04600 transposable element gene 0.6 0.32 -0.32
82 AT4G24840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein transport, Golgi organization; LOCATED IN: vacuole;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: COG complex
component, COG2 (InterPro:IPR009316); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.3 -0.32
83 AT1G01200 RAB GTPase homolog A3 ARABIDOPSIS RAB GTPASE HOMOLOG A3,
RAB GTPase homolog A3, RAB GTPase
homolog A3		 0.6 0.3 -0.33
84 AT3G49820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.32 -0.34
85 AT5G55860 Plant protein of unknown function (DUF827) -0.6 0.32 -0.31
86 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.6 0.32 -0.34
87 AT3G51890 Clathrin light chain protein -0.6 0.3 -0.32
88 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein 0.6 0.33 -0.32
89 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 0.6 0.32 -0.3
90 AT3G56380 response regulator 17 response regulator 17, response
regulator 17		 0.6 0.31 -0.31
91 AT5G60720 Protein of unknown function, DUF547 -0.6 0.32 -0.33
92 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 -0.59 0.35 -0.29
93 AT1G26290 unknown protein; Has 126 Blast hits to 112 proteins in 36
species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3;
Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source:
NCBI BLink).		 -0.59 0.3 -0.34
94 AT2G03070 mediator subunit 8 mediator subunit 8 -0.59 0.31 -0.31
95 AT3G50830 cold-regulated 413-plasma membrane 2 ATCOR413-PM2, cold-regulated
413-plasma membrane 2		 -0.59 0.31 -0.31
96 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 -0.58 0.31 -0.32
97 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein -0.58 0.32 -0.31
98 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 -0.58 0.31 -0.3
99 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.3