AT5G52650 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G52650
Description RNA binding Plectin/S10 domain-containing protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52650 RNA binding Plectin/S10 domain-containing protein 1 0.33 -0.34
2 AT3G04840 Ribosomal protein S3Ae 0.91 0.32 -0.32
3 AT2G01250 Ribosomal protein L30/L7 family protein 0.91 0.31 -0.33
4 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.9 0.3 -0.32
5 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.89 0.32 -0.3
6 AT5G56710 Ribosomal protein L31e family protein 0.89 0.32 -0.33
7 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.89 0.33 -0.3
8 AT5G61170 Ribosomal protein S19e family protein 0.89 0.32 -0.3
9 AT3G58610 ketol-acid reductoisomerase 0.88 0.32 -0.31
10 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.88 0.31 -0.31
11 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.88 0.29 -0.31
12 AT4G16720 Ribosomal protein L23/L15e family protein 0.87 0.31 -0.29
13 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.87 0.33 -0.33
14 AT3G53430 Ribosomal protein L11 family protein 0.87 0.31 -0.32
15 AT3G05560 Ribosomal L22e protein family 0.87 0.33 -0.32
16 AT3G60770 Ribosomal protein S13/S15 0.87 0.3 -0.3
17 AT3G09200 Ribosomal protein L10 family protein 0.87 0.32 -0.33
18 AT2G27710 60S acidic ribosomal protein family 0.86 0.31 -0.31
19 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.36 -0.3
20 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.86 0.32 -0.31
21 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.34 -0.34
22 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.86 0.29 -0.31
23 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.85 0.33 -0.34
24 AT5G47700 60S acidic ribosomal protein family 0.85 0.31 -0.32
25 AT4G15000 Ribosomal L27e protein family 0.85 0.33 -0.29
26 AT1G67430 Ribosomal protein L22p/L17e family protein 0.85 0.31 -0.31
27 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.85 0.29 -0.29
28 AT1G26880 Ribosomal protein L34e superfamily protein 0.85 0.31 -0.32
29 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.85 0.31 -0.29
30 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.85 0.33 -0.3
31 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.85 0.3 -0.32
32 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.85 0.33 -0.31
33 AT3G13740 Ribonuclease III family protein 0.85 0.33 -0.31
34 AT4G17390 Ribosomal protein L23/L15e family protein 0.84 0.33 -0.3
35 AT3G11510 Ribosomal protein S11 family protein 0.84 0.31 -0.3
36 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.84 0.32 -0.33
37 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.84 0.32 -0.29
38 AT5G15200 Ribosomal protein S4 0.84 0.31 -0.3
39 AT5G48760 Ribosomal protein L13 family protein 0.84 0.3 -0.32
40 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.84 0.33 -0.31
41 AT4G22670 HSP70-interacting protein 1 HSP70-interacting protein 1,
HSP70-interacting protein 1,
tetratricopeptide repeat 11		 0.84 0.31 -0.32
42 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.84 0.33 -0.33
43 AT5G45820 CBL-interacting protein kinase 20 CBL-interacting protein kinase 20,
PROTEIN KINASE 18, SNF1-RELATED
PROTEIN KINASE 3.6		 0.83 0.33 -0.31
44 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 0.83 0.32 -0.32
45 AT4G25890 60S acidic ribosomal protein family 0.83 0.29 -0.32
46 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.83 0.33 -0.33
47 AT4G14320 Zinc-binding ribosomal protein family protein 0.83 0.33 -0.33
48 AT3G10610 Ribosomal S17 family protein 0.83 0.3 -0.3
49 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.83 0.31 -0.29
50 AT4G14960 Tubulin/FtsZ family protein TUA6 0.83 0.31 -0.32
51 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.83 0.32 -0.3
52 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.83 0.34 -0.32
53 AT3G43810 calmodulin 7 calmodulin 7 0.83 0.32 -0.34
54 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.83 0.31 -0.32
55 AT3G09630 Ribosomal protein L4/L1 family 0.83 0.34 -0.31
56 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.82 0.32 -0.32
57 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.82 0.33 -0.31
58 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.82 0.31 -0.31
59 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.3 -0.31
60 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.82 0.33 -0.33
61 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.82 0.32 -0.31
62 AT5G16130 Ribosomal protein S7e family protein 0.82 0.31 -0.32
63 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.82 0.3 -0.31
64 AT3G60245 Zinc-binding ribosomal protein family protein 0.82 0.32 -0.32
65 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.82 0.32 -0.33
66 AT2G34480 Ribosomal protein L18ae/LX family protein 0.82 0.32 -0.33
67 AT3G02080 Ribosomal protein S19e family protein 0.82 0.33 -0.29
68 AT1G22930 T-complex protein 11 -0.82 0.31 -0.32
69 AT5G56670 Ribosomal protein S30 family protein 0.82 0.31 -0.3
70 AT5G19750 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.81 0.3 -0.31
71 AT3G52590 ubiquitin extension protein 1 EMBRYO DEFECTIVE 2167,
EARLY-RESPONSIVE TO DEHYDRATION
16, HAPLESS 4, ubiquitin extension
protein 1		 0.81 0.31 -0.32
72 AT1G12090 extensin-like protein extensin-like protein 0.81 0.32 -0.31
73 AT2G27720 60S acidic ribosomal protein family 0.81 0.31 -0.29
74 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 0.81 0.32 -0.32
75 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.81 0.3 -0.32
76 AT5G59870 histone H2A 6 histone H2A 6 0.81 0.34 -0.32
77 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.81 0.32 -0.31
78 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 0.8 0.32 -0.32
79 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.8 0.35 -0.29
80 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein 0.8 0.31 -0.3
81 AT3G24740 Protein of unknown function (DUF1644) -0.8 0.32 -0.31
82 AT2G06850 xyloglucan endotransglucosylase/hydrolase 4 endoxyloglucan transferase A1,
ENDOXYLOGLUCAN TRANSFERASE,
xyloglucan
endotransglucosylase/hydrolase 4		 0.8 0.31 -0.31
83 AT1G20010 tubulin beta-5 chain tubulin beta-5 chain 0.8 0.31 -0.31
84 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 0.8 0.35 -0.28
85 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.8 0.32 -0.35
86 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D 0.8 0.32 -0.33
87 AT1G47200 WPP domain protein 2 WPP domain protein 2 0.8 0.3 -0.31
88 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.8 0.31 -0.31
89 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.8 0.31 -0.33
90 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.8 0.31 -0.34
91 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 0.8 0.3 -0.3
92 AT2G47950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.79 0.32 -0.33
93 AT2G40270 Protein kinase family protein -0.79 0.33 -0.32
94 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.78 0.3 -0.3
95 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.78 0.32 -0.3
96 AT5G35370 S-locus lectin protein kinase family protein -0.78 0.32 -0.31
97 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.78 0.32 -0.31
98 AT3G61960 Protein kinase superfamily protein -0.78 0.32 -0.33
99 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.77 0.32 -0.3
100 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.77 0.32 -0.32
101 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.77 0.3 -0.33
102 AT2G38800 Plant calmodulin-binding protein-related -0.77 0.32 -0.31
103 AT1G20490 AMP-dependent synthetase and ligase family protein -0.76 0.32 -0.33
104 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.76 0.34 -0.32
105 AT5G66650 Protein of unknown function (DUF607) -0.76 0.33 -0.29
106 AT1G42470 Patched family protein -0.76 0.31 -0.3
107 AT5G47070 Protein kinase superfamily protein -0.76 0.3 -0.32
108 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.76 0.31 -0.32
109 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C -0.75 0.32 -0.31
110 AT1G21000 PLATZ transcription factor family protein -0.75 0.3 -0.31
111 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.75 0.3 -0.3
112 AT1G24330 ARM repeat superfamily protein -0.75 0.32 -0.31
113 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 -0.75 0.31 -0.3
114 AT4G02360 Protein of unknown function, DUF538 -0.75 0.31 -0.32
115 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.75 0.31 -0.32
116 AT3G27610 Nucleotidylyl transferase superfamily protein -0.74 0.32 -0.32
117 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.74 0.31 -0.3
118 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.74 0.32 -0.32
119 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.73 0.32 -0.31
120 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 -0.72 0.31 -0.33
121 AT3G54200 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.72 0.33 -0.29
122 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 -0.72 0.31 -0.32
123 AT2G25460 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04860.1); Has
108 Blast hits to 69 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.29 -0.32
124 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 -0.72 0.33 -0.31
125 AT2G28400 Protein of unknown function, DUF584 -0.72 0.33 -0.31
126 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 -0.72 0.34 -0.33
127 AT1G19680 RING/U-box superfamily protein -0.72 0.3 -0.31
128 AT2G01450 MAP kinase 17 MAP kinase 17, MAP kinase 17 -0.71 0.32 -0.31
129 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.71 0.32 -0.32
130 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.7 0.32 -0.32
131 AT1G17830 Protein of unknown function (DUF789) -0.7 0.33 -0.31