AT5G52290 : SHORTAGE IN CHIASMATA 1
Query Information
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AGICode AT5G52290
Description shortage in chiasmata 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G52290 shortage in chiasmata 1 SHORTAGE IN CHIASMATA 1 1 0.31 -0.31
2 AT2G35540 DNAJ heat shock N-terminal domain-containing protein -0.66 0.32 -0.33
3 AT3G52920 Family of unknown function (DUF662) 0.64 0.34 -0.32
4 AT2G45920 U-box domain-containing protein -0.6 0.34 -0.33
5 AT3G21180 autoinhibited Ca(2+)-ATPase 9 autoinhibited Ca(2+)-ATPase 9,
ATACA9		 -0.59 0.3 -0.3
6 AT1G47620 cytochrome P450, family 96, subfamily A, polypeptide 8 cytochrome P450, family 96,
subfamily A, polypeptide 8		 0.59 0.31 -0.33
7 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 0.59 0.32 -0.32
8 AT1G75110 Nucleotide-diphospho-sugar transferase family protein REDUCED RESIDUAL ARABINOSE 2 0.58 0.29 -0.32
9 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 0.57 0.33 -0.32
10 AT3G03430 Calcium-binding EF-hand family protein 0.57 0.31 -0.31
11 AT5G39650 Protein of unknown function (DUF679) DUO1-activated unknown 2 -0.56 0.31 -0.33
12 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor 0.56 0.31 -0.31
13 AT2G20720 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.32 -0.31
14 AT3G43110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, flower; EXPRESSED
DURING: 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G20790.1); Has 30 Blast hits to 30
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.28 -0.31
15 AT5G60020 laccase 17 ATLAC17, laccase 17 0.55 0.31 -0.33
16 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily 0.55 0.31 -0.33
17 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 0.55 0.3 -0.31
18 AT3G01010 UDP-glucose/GDP-mannose dehydrogenase family protein 0.55 0.32 -0.31
19 AT3G54310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits
to 41 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.33 -0.32
20 AT3G48960 Ribosomal protein L13e family protein -0.54 0.3 -0.32
21 AT3G09070 Protein of unknown function (DUF740) 0.54 0.3 -0.33
22 AT1G66030 cytochrome P450, family 96, subfamily A, polypeptide 14
pseudogene		 cytochrome P450, family 96,
subfamily A, polypeptide 14
pseudogene		 -0.53 0.33 -0.3
23 AT5G05540 small RNA degrading nuclease 2 small RNA degrading nuclease 2 -0.53 0.33 -0.33
24 AT2G33000 ubiquitin-associated (UBA)/TS-N domain-containing
protein-related		 0.53 0.31 -0.3
25 AT2G41300 strictosidine synthase-like 1 strictosidine synthase-like 1 -0.53 0.3 -0.31
26 AT5G53480 ARM repeat superfamily protein -0.53 0.32 -0.32
27 AT5G64890 elicitor peptide 2 precursor elicitor peptide 2 precursor -0.53 0.32 -0.32
28 AT3G28330 F-box family protein-related -0.52 0.33 -0.31
29 AT2G02650 Ribonuclease H-like superfamily protein 0.52 0.32 -0.32
30 AT3G55180 alpha/beta-Hydrolases superfamily protein -0.51 0.32 -0.31
31 AT2G38080 Laccase/Diphenol oxidase family protein ARABIDOPSIS LACCASE-LIKE
MULTICOPPER OXIDASE 4, IRREGULAR
XYLEM 12, LACCASE 4, LACCASE-LIKE
MULTICOPPER OXIDASE 4		 0.51 0.3 -0.31
32 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP -0.51 0.32 -0.31
33 AT4G09480 transposable element gene 0.51 0.33 -0.33
34 AT3G50150 Plant protein of unknown function (DUF247) 0.51 0.32 -0.32
35 AT2G45380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: inflorescence meristem, flower,
cultured cell; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: Calcium-binding EF-hand family protein
(TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in
31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi -
0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.5 0.3 -0.3
36 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.31 -0.29
37 AT2G11810 monogalactosyldiacylglycerol synthase type C ATMGD3, MONOGALACTOSYL
DIACYLGLYCEROL SYNTHASE 3,
monogalactosyldiacylglycerol
synthase type C		 -0.5 0.32 -0.31
38 AT5G26350 transposable element gene -0.49 0.31 -0.32
39 AT5G16570 glutamine synthetase 1;4 glutamine synthetase 1;4 0.49 0.32 -0.32
40 AT1G28300 AP2/B3-like transcriptional factor family protein LEAFY COTYLEDON 2 0.49 0.33 -0.33
41 AT3G28610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.49 0.32 -0.31
42 AT2G33420 Protein of unknown function (DUF810) 0.49 0.28 -0.29
43 AT1G61850 phospholipases;galactolipases -0.48 0.32 -0.32
44 AT5G59930 Cysteine/Histidine-rich C1 domain family protein -0.48 0.32 -0.29
45 AT2G25600 Shaker pollen inward K+ channel AKT6, Shaker pollen inward K+
channel		 -0.48 0.29 -0.31
46 AT1G08310 alpha/beta-Hydrolases superfamily protein -0.47 0.34 -0.31
47 AT1G33710 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.46 0.31 -0.3
48 AT3G02980 MEIOTIC CONTROL OF CROSSOVERS1 MEIOTIC CONTROL OF CROSSOVERS1 -0.46 0.31 -0.31